Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11140

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
2,391,899	+				-1.1
2,391,899	+				-1.5
2,391,900	-				+1.5
2,391,904	+				-0.5
2,391,904	+				-0.5
2,391,904	+				-0.1
2,391,904	+				-0.1
2,391,904	+				-2.2
2,391,904	+				+1.9
2,391,904	+				-1.3
2,391,904	+				-0.5
2,391,904	+				+0.4
2,391,905	-				+0.5
2,391,905	-				-0.4
2,391,905	-				-0.8
2,391,905	-				-0.8
2,391,905	-				-0.5
2,391,905	-				+0.7
2,391,905	-				-1.0
2,391,944	+				+0.8
2,391,944	+				-2.2
2,391,944	+				-1.1
2,391,944	+				+0.5
2,391,944	+				-1.5
2,391,944	+				-1.6
2,391,945	-				-0.1
2,391,945	-				+1.2
2,392,087	+	proC	OKGIIK_11135	0.19	-0.5
2,392,087	+	proC	OKGIIK_11135	0.19	-1.5
2,392,087	+	proC	OKGIIK_11135	0.19	-2.7
2,392,087	+	proC	OKGIIK_11135	0.19	+0.5
2,392,087	+	proC	OKGIIK_11135	0.19	-0.1
2,392,088	-	proC	OKGIIK_11135	0.19	-2.6
2,392,088	-	proC	OKGIIK_11135	0.19	+1.1
2,392,088	-	proC	OKGIIK_11135	0.19	+0.5
2,392,465	+	proC	OKGIIK_11135	0.64	-0.2
2,392,465	+	proC	OKGIIK_11135	0.64	-0.8
2,392,465	+	proC	OKGIIK_11135	0.64	+0.2
2,392,466	-	proC	OKGIIK_11135	0.64	-1.5
2,392,466	-	proC	OKGIIK_11135	0.64	-0.1
2,392,466	-	proC	OKGIIK_11135	0.64	-0.1
2,392,466	-	proC	OKGIIK_11135	0.64	-1.9
2,392,466	-	proC	OKGIIK_11135	0.64	+0.5
2,392,466	-	proC	OKGIIK_11135	0.64	+1.1
2,392,710	+				-0.3
2,392,761	+				-0.8
2,392,761	+				-0.8
2,392,761	+				-0.8
2,392,761	+				-1.9
2,392,761	+				-2.1
2,392,761	+				+0.2
2,392,761	+				-1.8
2,392,761	+				-1.5
2,392,761	+				-0.8
2,392,761	+				-0.5
2,392,761	+				-2.4
2,392,761	+				-0.5
2,392,762	-				-2.6
2,392,762	-				-0.5
2,392,762	-				-1.3
2,392,762	-				-0.5
2,392,762	-				+1.5
2,392,762	-				-0.9
2,392,762	-				-1.1
2,392,762	-				-0.3
2,392,762	-				-1.3
2,392,762	-				+0.9
2,392,762	-				-1.1
2,392,777	+				+1.5
2,392,777	+				-1.5
2,392,777	+				-0.1
2,392,777	+				-1.5
2,392,777	+				-0.5
2,392,778	-				-1.8
2,392,778	-				+0.5
2,392,888	-		OKGIIK_11140	0.23	-0.5
2,393,091	+		OKGIIK_11140	0.58	-0.5
2,393,091	+		OKGIIK_11140	0.58	+0.5
2,393,091	+		OKGIIK_11140	0.58	+0.1
2,393,091	+		OKGIIK_11140	0.58	-0.2
2,393,091	+		OKGIIK_11140	0.58	-1.3
2,393,091	+		OKGIIK_11140	0.58	-0.1
2,393,091	+		OKGIIK_11140	0.58	-0.5
2,393,091	+		OKGIIK_11140	0.58	-0.5
2,393,091	+		OKGIIK_11140	0.58	+0.2
2,393,091	+		OKGIIK_11140	0.58	+0.5
2,393,091	+		OKGIIK_11140	0.58	-0.4
2,393,091	+		OKGIIK_11140	0.58	-1.3
2,393,091	+		OKGIIK_11140	0.58	-0.1
2,393,091	+		OKGIIK_11140	0.58	-2.4
2,393,092	-		OKGIIK_11140	0.59	-1.6
2,393,092	-		OKGIIK_11140	0.59	+0.4
2,393,092	-		OKGIIK_11140	0.59	-1.8
2,393,092	-		OKGIIK_11140	0.59	-1.1
2,393,092	-		OKGIIK_11140	0.59	+0.2
2,393,092	-		OKGIIK_11140	0.59	-1.8
2,393,092	-		OKGIIK_11140	0.59	-1.5
2,393,092	-		OKGIIK_11140	0.59	-1.8
2,393,092	-		OKGIIK_11140	0.59	-0.9
2,393,092	-		OKGIIK_11140	0.59	-2.1
2,393,092	-		OKGIIK_11140	0.59	+0.5
2,393,092	-		OKGIIK_11140	0.59	+0.3
2,393,092	-		OKGIIK_11140	0.59	-1.6
2,393,349	+				-1.1
2,393,349	+				-1.1
2,393,349	+				-1.5
2,393,349	+				-1.2
2,393,349	+				-0.9
2,393,349	+				-0.5
2,393,349	+				+0.5
2,393,349	+				-0.6
2,393,349	+				-1.3
2,393,349	+				-1.1
2,393,349	+				-1.8
2,393,349	+				+0.5
2,393,349	+				-1.1
2,393,349	+				-0.5
2,393,349	+				+0.5
2,393,349	+				+1.7
2,393,349	+				-0.8
2,393,349	+				-2.2
2,393,349	+				-2.0
2,393,349	+				-1.3
2,393,350	-				-2.4
2,393,350	-				+0.5
2,393,350	-				+0.1
2,393,350	-				+0.5
2,393,350	-				-0.8
2,393,350	-				+0.5
2,393,350	-				-1.0
2,393,350	-				+2.1
2,393,350	-				-0.1
2,393,350	-				-0.3
2,393,350	-				-1.9
2,393,350	-				-0.2
2,393,350	-				-2.1
2,393,350	-				-0.8
2,393,350	-				-0.5
2,393,350	-				-0.5
2,393,350	-				-1.1
2,393,350	-				+0.5
2,393,350	-				+0.5
2,393,350	-				+1.1
2,393,350	-				+0.5
2,393,350	-				+0.5
2,393,350	-				-1.3
2,393,350	-				-0.6
2,393,350	-				-0.3
2,393,353	+				-1.6
2,393,353	+				-0.5
2,393,353	+				-2.4
2,393,353	+				-1.1
2,393,353	+				-0.2
2,393,353	+				+0.2
2,393,353	+				-1.3
2,393,353	+				-0.5
2,393,353	+				-1.8
2,393,353	+				-0.5
2,393,353	+				+0.0
2,393,353	+				-2.3
2,393,353	+				+1.3
2,393,353	+				+0.5
2,393,353	+				-0.6
2,393,353	+				-1.1
2,393,353	+				+0.5
2,393,353	+				-1.1
2,393,353	+				-0.8
2,393,353	+				+0.2
2,393,353	+				-0.8
2,393,353	+				+0.5
2,393,353	+				-0.8
2,393,353	+				-1.5
2,393,353	+				-1.9
2,393,354	-				+0.1
2,393,354	-				-2.6
2,393,354	-				-0.6
2,393,354	-				-1.3
2,393,354	-				-0.3
2,393,354	-				+0.0
2,393,354	-				+0.6
2,393,354	-				-0.7
2,393,354	-				+0.2
2,393,354	-				+0.1
2,393,354	-				+0.4
2,393,354	-				-1.6
2,393,354	-				-0.5
2,393,354	-				+0.5
2,393,354	-				-0.5
2,393,354	-				-1.2
2,393,354	-				+0.5
2,393,354	-				-0.2
2,393,354	-				-0.9
2,393,354	-				+0.2
2,393,354	-				-0.3
2,393,354	-				-1.3
2,393,354	-				-1.9
2,393,656	+				-1.2
2,393,656	+				-1.3
2,393,656	+				-1.1
2,393,656	+				-1.5
2,393,656	+				+0.5
2,393,656	+				-0.3
2,393,680	+				-0.7
2,393,680	+				-2.4
2,393,680	+				-0.8
2,393,680	+				-0.1
2,393,680	+				-1.4
2,393,680	+				-0.4
2,393,680	+				-0.2
2,393,680	+				+0.2
2,393,681	-				-1.3
2,393,681	-				+0.1
2,393,681	-				-0.8
2,393,681	-				-0.7
2,393,739	+				-1.4
2,393,739	+				-0.5
2,393,739	+				-0.8
2,393,739	+				-1.9
2,393,739	+				+0.5
2,393,739	+				-0.2
2,393,740	-				-0.8
2,393,740	-				-0.5
2,393,740	-				-1.9
2,393,740	-				-2.0
2,393,740	-				+0.4
2,393,740	-				-1.7
2,393,740	-				-0.3
2,393,740	-				-1.1
2,393,740	-				-0.8
2,393,775	-				+0.0
2,393,775	-				+0.5
2,393,820	+				-0.9
2,393,821	-				-0.5
2,393,821	-				-0.1
2,393,955	+				+0.2
2,393,955	+				-1.0
2,393,955	+				-2.3
2,393,955	+				-0.6
2,393,955	+				+0.5
2,393,955	+				-1.2
2,393,955	+				-0.9
2,393,955	+				-2.4
2,393,955	+				-1.5
2,393,955	+				-0.5
2,393,955	+				-0.8
2,393,955	+				-1.1
2,393,955	+				-0.5
2,393,955	+				-1.2
2,393,955	+				+0.5
2,393,955	+				-0.5
2,393,955	+				-2.1
2,393,955	+				-0.8
2,393,955	+				-2.1
2,393,955	+				-1.1
2,393,955	+				-1.8
2,393,955	+				+0.2
2,393,955	+				-0.9
2,393,955	+				-0.3
2,393,955	+				+1.9
2,393,956	-				+0.3
2,393,956	-				-0.1
2,393,956	-				-0.6
2,393,956	-				-1.5
2,393,956	-				-1.9
2,393,956	-				-0.8
2,393,956	-				+2.4
2,393,956	-				+0.7
2,393,956	-				-0.7
2,393,956	-				-1.6
2,393,956	-				-2.5
2,393,956	-				+0.5
2,393,956	-				-0.5
2,393,956	-				-1.4
2,393,956	-				-1.9
2,393,956	-				+1.3
2,393,956	-				+0.2
2,393,956	-				+1.7
2,393,985	+				-1.2
2,393,985	+				-1.3
2,393,985	+				-1.9
2,393,985	+				-1.6
2,393,985	+				-0.3
2,393,985	+				+1.3
2,393,985	+				+0.7
2,393,985	+				+0.5
2,393,986	-				-0.8
2,393,986	-				-2.5
2,393,986	-				-1.1
2,393,986	-				-0.9
2,393,986	-				-0.5
2,393,986	-				+0.5
2,393,986	-				+0.5
2,393,986	-				+1.3
2,393,986	-				-0.8
2,393,986	-				-1.1
2,393,986	-				-1.3
2,393,986	-				-0.5
2,394,054	+				-2.4
2,394,054	+				-0.5
2,394,054	+				-0.6
2,394,055	-				+1.2
2,394,055	-				+0.5
2,394,055	-				-1.1
2,394,055	-				-0.4
2,394,055	-				-2.1