Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_06250 and OKGIIK_06255 overlap by 11 nucleotides OKGIIK_06255 and OKGIIK_06260 are separated by 571 nucleotides OKGIIK_06260 and OKGIIK_06265 overlap by 4 nucleotides
OKGIIK_06250: OKGIIK_06250 - Copper chaperone, at 1,373,895 to 1,374,182
_06250
OKGIIK_06255: OKGIIK_06255 - Transcription elongation factor Elf1, at 1,374,172 to 1,374,387
_06255
OKGIIK_06260: OKGIIK_06260 - TolC family protein, at 1,374,959 to 1,376,278
_06260
OKGIIK_06265: OKGIIK_06265 - Efflux RND transporter periplasmic adaptor subunit, at 1,376,275 to 1,377,372
_06265
Position (kb)
1374
1375
1376
1377 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.268 kb on + strand, within OKGIIK_06255 at 1374.386 kb on - strand at 1374.386 kb on - strand at 1374.386 kb on - strand at 1374.399 kb on + strand at 1374.400 kb on - strand at 1374.467 kb on + strand at 1374.468 kb on - strand at 1374.468 kb on - strand at 1374.468 kb on - strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.484 kb on + strand at 1374.485 kb on - strand at 1374.485 kb on - strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.486 kb on + strand at 1374.487 kb on - strand at 1374.487 kb on - strand at 1374.487 kb on - strand at 1374.487 kb on - strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.501 kb on + strand at 1374.502 kb on - strand at 1374.502 kb on - strand at 1374.502 kb on - strand at 1374.502 kb on - strand at 1374.502 kb on - strand at 1374.502 kb on - strand at 1374.502 kb on - strand at 1374.900 kb on - strand at 1375.004 kb on + strand at 1375.004 kb on + strand at 1375.004 kb on + strand at 1375.004 kb on + strand at 1375.033 kb on - strand at 1375.054 kb on - strand at 1375.108 kb on + strand, within OKGIIK_06260 at 1375.108 kb on + strand, within OKGIIK_06260 at 1375.108 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.196 kb on + strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.197 kb on - strand, within OKGIIK_06260 at 1375.340 kb on + strand, within OKGIIK_06260 at 1375.340 kb on + strand, within OKGIIK_06260 at 1375.340 kb on + strand, within OKGIIK_06260 at 1375.341 kb on - strand, within OKGIIK_06260 at 1375.341 kb on - strand, within OKGIIK_06260 at 1375.341 kb on - strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.645 kb on + strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.646 kb on - strand, within OKGIIK_06260 at 1375.669 kb on + strand, within OKGIIK_06260 at 1375.669 kb on + strand, within OKGIIK_06260 at 1375.670 kb on - strand, within OKGIIK_06260 at 1375.670 kb on - strand, within OKGIIK_06260 at 1375.670 kb on - strand, within OKGIIK_06260 at 1375.765 kb on + strand, within OKGIIK_06260 at 1375.765 kb on + strand, within OKGIIK_06260 at 1375.766 kb on - strand, within OKGIIK_06260 at 1375.766 kb on - strand, within OKGIIK_06260 at 1375.766 kb on - strand, within OKGIIK_06260 at 1375.766 kb on - strand, within OKGIIK_06260 at 1375.766 kb on - strand, within OKGIIK_06260 at 1375.766 kb on - strand, within OKGIIK_06260 at 1375.803 kb on + strand, within OKGIIK_06260 at 1375.803 kb on + strand, within OKGIIK_06260 at 1375.803 kb on + strand, within OKGIIK_06260 at 1375.803 kb on + strand, within OKGIIK_06260 at 1375.803 kb on + strand, within OKGIIK_06260 at 1375.803 kb on + strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1375.804 kb on - strand, within OKGIIK_06260 at 1376.100 kb on - strand, within OKGIIK_06260 at 1376.183 kb on + strand at 1376.183 kb on + strand at 1376.183 kb on + strand at 1376.184 kb on - strand at 1376.184 kb on - strand at 1376.243 kb on - strand at 1376.243 kb on - strand at 1376.243 kb on - strand at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.485 kb on + strand, within OKGIIK_06265 at 1376.486 kb on - strand, within OKGIIK_06265 at 1376.486 kb on - strand, within OKGIIK_06265 at 1376.486 kb on - strand, within OKGIIK_06265 at 1376.689 kb on + strand, within OKGIIK_06265 at 1376.689 kb on + strand, within OKGIIK_06265 at 1376.689 kb on + strand, within OKGIIK_06265 at 1376.689 kb on + strand, within OKGIIK_06265 at 1376.689 kb on + strand, within OKGIIK_06265 at 1376.689 kb on + strand, within OKGIIK_06265 at 1376.690 kb on - strand, within OKGIIK_06265 at 1376.690 kb on - strand, within OKGIIK_06265 at 1376.690 kb on - strand, within OKGIIK_06265 at 1376.740 kb on + strand, within OKGIIK_06265 at 1376.741 kb on - strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.806 kb on + strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.807 kb on - strand, within OKGIIK_06265 at 1376.884 kb on - strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.892 kb on + strand, within OKGIIK_06265 at 1376.893 kb on - strand, within OKGIIK_06265 at 1376.893 kb on - strand, within OKGIIK_06265 at 1376.893 kb on - strand, within OKGIIK_06265 at 1376.893 kb on - strand, within OKGIIK_06265 at 1376.893 kb on - strand, within OKGIIK_06265
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 1,374,268 + OKGIIK_06255 0.44 -0.8 1,374,268 + OKGIIK_06255 0.44 +1.1 1,374,268 + OKGIIK_06255 0.44 +1.1 1,374,268 + OKGIIK_06255 0.44 -1.3 1,374,268 + OKGIIK_06255 0.44 +0.2 1,374,268 + OKGIIK_06255 0.44 +1.8 1,374,268 + OKGIIK_06255 0.44 +0.3 1,374,386 - -1.0 1,374,386 - +0.7 1,374,386 - -1.8 1,374,399 + -1.1 1,374,400 - -2.8 1,374,467 + -1.5 1,374,468 - -0.2 1,374,468 - +0.2 1,374,468 - -1.2 1,374,484 + -1.3 1,374,484 + -1.7 1,374,484 + -0.8 1,374,484 + -0.4 1,374,484 + -2.5 1,374,484 + -0.8 1,374,484 + -1.4 1,374,484 + -0.1 1,374,485 - -0.6 1,374,485 - -0.5 1,374,486 + -1.1 1,374,486 + -0.6 1,374,486 + +0.5 1,374,486 + -1.1 1,374,486 + -0.1 1,374,486 + -0.8 1,374,486 + -0.4 1,374,486 + -1.7 1,374,486 + -0.4 1,374,486 + -0.5 1,374,486 + +0.0 1,374,486 + -0.8 1,374,486 + -0.8 1,374,486 + -1.1 1,374,486 + +0.2 1,374,487 - -1.1 1,374,487 - -1.1 1,374,487 - +0.1 1,374,487 - -1.1 1,374,501 + -0.1 1,374,501 + -1.3 1,374,501 + +0.1 1,374,501 + -0.3 1,374,501 + -0.5 1,374,501 + -0.5 1,374,501 + +0.4 1,374,501 + +0.5 1,374,502 - -1.2 1,374,502 - -1.0 1,374,502 - -0.3 1,374,502 - -2.0 1,374,502 - -2.2 1,374,502 - +0.3 1,374,502 - -1.1 1,374,900 - +0.5 1,375,004 + +1.1 1,375,004 + -1.1 1,375,004 + -0.8 1,375,004 + -0.5 1,375,033 - -2.3 1,375,054 - -0.8 1,375,108 + OKGIIK_06260 0.11 -0.3 1,375,108 + OKGIIK_06260 0.11 -0.2 1,375,108 + OKGIIK_06260 0.11 -0.7 1,375,196 + OKGIIK_06260 0.18 -0.8 1,375,196 + OKGIIK_06260 0.18 -0.8 1,375,196 + OKGIIK_06260 0.18 +0.5 1,375,196 + OKGIIK_06260 0.18 -0.8 1,375,196 + OKGIIK_06260 0.18 -1.3 1,375,196 + OKGIIK_06260 0.18 -1.1 1,375,196 + OKGIIK_06260 0.18 -1.2 1,375,197 - OKGIIK_06260 0.18 +0.5 1,375,197 - OKGIIK_06260 0.18 -1.4 1,375,197 - OKGIIK_06260 0.18 -2.4 1,375,197 - OKGIIK_06260 0.18 -0.8 1,375,197 - OKGIIK_06260 0.18 +1.2 1,375,197 - OKGIIK_06260 0.18 -0.4 1,375,197 - OKGIIK_06260 0.18 -0.8 1,375,197 - OKGIIK_06260 0.18 -0.5 1,375,197 - OKGIIK_06260 0.18 -1.1 1,375,197 - OKGIIK_06260 0.18 -0.4 1,375,197 - OKGIIK_06260 0.18 -1.0 1,375,197 - OKGIIK_06260 0.18 -0.1 1,375,340 + OKGIIK_06260 0.29 -1.4 1,375,340 + OKGIIK_06260 0.29 -2.7 1,375,340 + OKGIIK_06260 0.29 -0.1 1,375,341 - OKGIIK_06260 0.29 -1.6 1,375,341 - OKGIIK_06260 0.29 -0.8 1,375,341 - OKGIIK_06260 0.29 +0.2 1,375,645 + OKGIIK_06260 0.52 -3.4 1,375,645 + OKGIIK_06260 0.52 -0.4 1,375,645 + OKGIIK_06260 0.52 -0.7 1,375,645 + OKGIIK_06260 0.52 -1.2 1,375,645 + OKGIIK_06260 0.52 -2.9 1,375,645 + OKGIIK_06260 0.52 -0.5 1,375,645 + OKGIIK_06260 0.52 -0.3 1,375,645 + OKGIIK_06260 0.52 +0.2 1,375,645 + OKGIIK_06260 0.52 -1.3 1,375,645 + OKGIIK_06260 0.52 -2.1 1,375,645 + OKGIIK_06260 0.52 -1.3 1,375,645 + OKGIIK_06260 0.52 -0.6 1,375,645 + OKGIIK_06260 0.52 -1.8 1,375,645 + OKGIIK_06260 0.52 +0.1 1,375,645 + OKGIIK_06260 0.52 -1.1 1,375,645 + OKGIIK_06260 0.52 -0.1 1,375,645 + OKGIIK_06260 0.52 +0.0 1,375,645 + OKGIIK_06260 0.52 -0.7 1,375,646 - OKGIIK_06260 0.52 -0.5 1,375,646 - OKGIIK_06260 0.52 -0.8 1,375,646 - OKGIIK_06260 0.52 -0.9 1,375,646 - OKGIIK_06260 0.52 -0.8 1,375,646 - OKGIIK_06260 0.52 -0.1 1,375,646 - OKGIIK_06260 0.52 -0.6 1,375,646 - OKGIIK_06260 0.52 -0.4 1,375,646 - OKGIIK_06260 0.52 -1.5 1,375,646 - OKGIIK_06260 0.52 -0.3 1,375,646 - OKGIIK_06260 0.52 -1.1 1,375,646 - OKGIIK_06260 0.52 -0.7 1,375,646 - OKGIIK_06260 0.52 +0.1 1,375,669 + OKGIIK_06260 0.54 -2.2 1,375,669 + OKGIIK_06260 0.54 -1.5 1,375,670 - OKGIIK_06260 0.54 -1.1 1,375,670 - OKGIIK_06260 0.54 -1.5 1,375,670 - OKGIIK_06260 0.54 -0.8 1,375,765 + OKGIIK_06260 0.61 -1.7 1,375,765 + OKGIIK_06260 0.61 -2.2 1,375,766 - OKGIIK_06260 0.61 -1.1 1,375,766 - OKGIIK_06260 0.61 -1.3 1,375,766 - OKGIIK_06260 0.61 -0.3 1,375,766 - OKGIIK_06260 0.61 -0.7 1,375,766 - OKGIIK_06260 0.61 -0.8 1,375,766 - OKGIIK_06260 0.61 -1.6 1,375,803 + OKGIIK_06260 0.64 -0.9 1,375,803 + OKGIIK_06260 0.64 -3.1 1,375,803 + OKGIIK_06260 0.64 -1.1 1,375,803 + OKGIIK_06260 0.64 -1.1 1,375,803 + OKGIIK_06260 0.64 -2.3 1,375,803 + OKGIIK_06260 0.64 -1.8 1,375,804 - OKGIIK_06260 0.64 -3.1 1,375,804 - OKGIIK_06260 0.64 +0.5 1,375,804 - OKGIIK_06260 0.64 +0.2 1,375,804 - OKGIIK_06260 0.64 +0.1 1,375,804 - OKGIIK_06260 0.64 -1.7 1,375,804 - OKGIIK_06260 0.64 +0.2 1,375,804 - OKGIIK_06260 0.64 -0.7 1,375,804 - OKGIIK_06260 0.64 -0.5 1,376,100 - OKGIIK_06260 0.86 -0.5 1,376,183 + -1.2 1,376,183 + +0.2 1,376,183 + +0.3 1,376,184 - -0.8 1,376,184 - -1.8 1,376,243 - +0.8 1,376,243 - -0.6 1,376,243 - -1.1 1,376,485 + OKGIIK_06265 0.19 -0.1 1,376,485 + OKGIIK_06265 0.19 -1.1 1,376,485 + OKGIIK_06265 0.19 -1.8 1,376,485 + OKGIIK_06265 0.19 -2.0 1,376,485 + OKGIIK_06265 0.19 -1.2 1,376,485 + OKGIIK_06265 0.19 -0.8 1,376,485 + OKGIIK_06265 0.19 -1.1 1,376,485 + OKGIIK_06265 0.19 -0.8 1,376,486 - OKGIIK_06265 0.19 -1.7 1,376,486 - OKGIIK_06265 0.19 -0.2 1,376,486 - OKGIIK_06265 0.19 +1.1 1,376,689 + OKGIIK_06265 0.38 -0.6 1,376,689 + OKGIIK_06265 0.38 -1.1 1,376,689 + OKGIIK_06265 0.38 -0.2 1,376,689 + OKGIIK_06265 0.38 -1.5 1,376,689 + OKGIIK_06265 0.38 -0.5 1,376,689 + OKGIIK_06265 0.38 +1.1 1,376,690 - OKGIIK_06265 0.38 -1.6 1,376,690 - OKGIIK_06265 0.38 +0.5 1,376,690 - OKGIIK_06265 0.38 -1.3 1,376,740 + OKGIIK_06265 0.42 +0.5 1,376,741 - OKGIIK_06265 0.42 -0.1 1,376,806 + OKGIIK_06265 0.48 -0.8 1,376,806 + OKGIIK_06265 0.48 -1.1 1,376,806 + OKGIIK_06265 0.48 -1.0 1,376,806 + OKGIIK_06265 0.48 -0.8 1,376,806 + OKGIIK_06265 0.48 -0.8 1,376,806 + OKGIIK_06265 0.48 -1.7 1,376,806 + OKGIIK_06265 0.48 +0.2 1,376,806 + OKGIIK_06265 0.48 -0.5 1,376,806 + OKGIIK_06265 0.48 -1.1 1,376,806 + OKGIIK_06265 0.48 -0.8 1,376,806 + OKGIIK_06265 0.48 -2.2 1,376,806 + OKGIIK_06265 0.48 -1.7 1,376,806 + OKGIIK_06265 0.48 -1.3 1,376,807 - OKGIIK_06265 0.48 -2.0 1,376,807 - OKGIIK_06265 0.48 +1.1 1,376,807 - OKGIIK_06265 0.48 -1.1 1,376,807 - OKGIIK_06265 0.48 -0.8 1,376,807 - OKGIIK_06265 0.48 +1.5 1,376,807 - OKGIIK_06265 0.48 -0.4 1,376,807 - OKGIIK_06265 0.48 -1.3 1,376,807 - OKGIIK_06265 0.48 +0.5 1,376,807 - OKGIIK_06265 0.48 +1.5 1,376,807 - OKGIIK_06265 0.48 -1.1 1,376,884 - OKGIIK_06265 0.55 -0.9 1,376,892 + OKGIIK_06265 0.56 -1.1 1,376,892 + OKGIIK_06265 0.56 -1.3 1,376,892 + OKGIIK_06265 0.56 -0.1 1,376,892 + OKGIIK_06265 0.56 -1.0 1,376,892 + OKGIIK_06265 0.56 -1.3 1,376,892 + OKGIIK_06265 0.56 -0.9 1,376,892 + OKGIIK_06265 0.56 -0.4 1,376,892 + OKGIIK_06265 0.56 -2.7 1,376,893 - OKGIIK_06265 0.56 -1.0 1,376,893 - OKGIIK_06265 0.56 -0.1 1,376,893 - OKGIIK_06265 0.56 -2.0 1,376,893 - OKGIIK_06265 0.56 -1.5 1,376,893 - OKGIIK_06265 0.56 -2.5
Or see this region's nucleotide sequence