Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05440

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
1,191,838	+		OKGIIK_05435	0.73	-0.1
1,191,865	+		OKGIIK_05435	0.80	-0.0
1,191,865	+		OKGIIK_05435	0.80	-0.0
1,191,865	+		OKGIIK_05435	0.80	-0.6
1,191,865	+		OKGIIK_05435	0.80	-0.2
1,191,865	+		OKGIIK_05435	0.80	-0.0
1,191,866	-		OKGIIK_05435	0.81	-0.6
1,191,866	-		OKGIIK_05435	0.81	-0.0
1,191,866	-		OKGIIK_05435	0.81	-0.0
1,191,866	-		OKGIIK_05435	0.81	+0.8
1,191,866	-		OKGIIK_05435	0.81	-0.3
1,191,866	-		OKGIIK_05435	0.81	-0.7
1,191,866	-		OKGIIK_05435	0.81	-0.0
1,191,866	-		OKGIIK_05435	0.81	+0.7
1,191,866	-		OKGIIK_05435	0.81	-0.6
1,191,866	-		OKGIIK_05435	0.81	+0.0
1,191,866	-		OKGIIK_05435	0.81	-0.6
1,191,866	-		OKGIIK_05435	0.81	+0.3
1,191,866	-		OKGIIK_05435	0.81	-0.3
1,192,062	+				+0.1
1,192,063	-				+0.7
1,192,064	+				-1.6
1,192,064	+				+0.2
1,192,064	+				-1.3
1,192,064	+				+0.7
1,192,065	-				+1.1
1,192,065	-				+0.6
1,192,065	-				-1.5
1,192,065	-				+0.1
1,192,065	-				+0.8
1,192,065	-				-2.2
1,192,065	-				+2.0
1,192,065	-				-1.8
1,192,065	-				+1.2
1,192,065	-				+1.0
1,192,065	-				+0.8
1,192,110	+				-2.3
1,192,111	-				+0.4
1,192,132	-				+0.5
1,192,162	-				+1.2
1,192,162	-				-1.6
1,192,162	-				+1.2
1,192,162	-				+0.8
1,192,184	+				-0.5
1,192,185	-				-0.3
1,192,258	+				+1.7
1,192,259	-				-1.0
1,192,271	+				-0.5
1,192,305	+				+0.1
1,192,305	+				-0.3
1,192,305	+				+1.8
1,192,305	+				+2.3
1,192,305	+				+2.0
1,192,305	+				-0.3
1,192,306	-				-0.3
1,192,306	-				+0.3
1,192,331	-				+1.2
1,192,553	+				+0.3
1,192,553	+				-1.3
1,192,553	+				-0.4
1,192,554	-				+1.1
1,192,554	-				-0.3
1,192,665	-		OKGIIK_05440	0.12	-1.1
1,192,691	+		OKGIIK_05440	0.14	-0.2
1,192,691	+		OKGIIK_05440	0.14	-0.0
1,192,691	+		OKGIIK_05440	0.14	-2.6
1,192,691	+		OKGIIK_05440	0.14	+0.4
1,192,691	+		OKGIIK_05440	0.14	+1.2
1,192,692	-		OKGIIK_05440	0.14	+1.7
1,192,692	-		OKGIIK_05440	0.14	+0.7
1,192,692	-		OKGIIK_05440	0.14	-0.8
1,192,692	-		OKGIIK_05440	0.14	-0.3
1,192,697	+		OKGIIK_05440	0.15	+0.3
1,192,697	+		OKGIIK_05440	0.15	+0.5
1,192,697	+		OKGIIK_05440	0.15	-0.8
1,192,697	+		OKGIIK_05440	0.15	+0.9
1,192,698	-		OKGIIK_05440	0.15	+2.0
1,192,698	-		OKGIIK_05440	0.15	-0.8
1,192,698	-		OKGIIK_05440	0.15	-0.6
1,192,698	-		OKGIIK_05440	0.15	-0.0
1,192,873	+		OKGIIK_05440	0.27	+0.5
1,192,874	-		OKGIIK_05440	0.27	+0.5
1,192,874	-		OKGIIK_05440	0.27	-0.6
1,192,956	-		OKGIIK_05440	0.33	+0.3
1,193,012	+		OKGIIK_05440	0.36	-1.1
1,193,013	-		OKGIIK_05440	0.37	+0.1
1,193,234	+		OKGIIK_05440	0.52	-0.2
1,193,241	+		OKGIIK_05440	0.52	-2.1
1,193,241	+		OKGIIK_05440	0.52	-0.0
1,193,242	-		OKGIIK_05440	0.52	-0.0
1,193,242	-		OKGIIK_05440	0.52	-0.3
1,193,242	-		OKGIIK_05440	0.52	-0.5
1,193,302	+		OKGIIK_05440	0.57	-0.8
1,193,391	-		OKGIIK_05440	0.63	+0.3
1,193,391	-		OKGIIK_05440	0.63	-0.0
1,193,441	+		OKGIIK_05440	0.66	-1.8
1,193,441	+		OKGIIK_05440	0.66	-0.2
1,193,441	+		OKGIIK_05440	0.66	-1.3
1,193,442	-		OKGIIK_05440	0.66	+0.2
1,193,507	+		OKGIIK_05440	0.71	+1.0
1,193,507	+		OKGIIK_05440	0.71	-0.3
1,193,508	-		OKGIIK_05440	0.71	+0.8
1,193,508	-		OKGIIK_05440	0.71	+0.8
1,193,508	-		OKGIIK_05440	0.71	-0.6
1,193,508	-		OKGIIK_05440	0.71	+0.2
1,193,600	+		OKGIIK_05440	0.77	-1.4
1,193,692	-		OKGIIK_05440	0.84	+0.4
1,193,815	+				-1.0
1,193,815	+				+0.2
1,193,816	-				+0.8
1,193,816	-				-1.6
1,193,816	-				-1.2
1,193,861	+				-0.7
1,193,862	-				-0.2
1,193,862	-				-0.0
1,193,862	-				+1.2
1,193,862	-				+1.0
1,193,862	-				-1.6
1,193,946	+				-0.5
1,193,946	+				-0.2
1,193,946	+				+0.4
1,193,946	+				-1.5
1,193,947	-				-0.3
1,194,033	+				-0.3
1,194,033	+				-1.0
1,194,033	+				-0.8
1,194,033	+				-0.8
1,194,033	+				-0.8
1,194,033	+				-2.1
1,194,034	-				-0.6
1,194,034	-				-2.3
1,194,075	+				+1.5
1,194,075	+				+0.5
1,194,075	+				-2.5
1,194,076	-				-1.0
1,194,076	-				-0.3
1,194,076	-				+0.7
1,194,076	-				+0.8
1,194,193	-				-0.3
1,194,229	+				+0.3
1,194,229	+				-1.3
1,194,230	-				-0.8
1,194,342	+				-2.0
1,194,342	+				-0.0
1,194,342	+				-1.5
1,194,342	+				-0.3
1,194,342	+				+0.5
1,194,343	-				-1.2
1,194,343	-				-0.8
1,194,343	-				+0.1
1,194,343	-				+1.0
1,194,343	-				-1.6
1,194,343	-				+0.2
1,194,343	-				-0.6
1,194,343	-				-1.3
1,194,343	-				-0.3
1,194,352	-				+1.0
1,194,387	+				-0.3
1,194,388	-				-0.0
1,194,428	+		OKGIIK_05445	0.12	+1.0
1,194,466	+		OKGIIK_05445	0.15	-0.6
1,194,526	+		OKGIIK_05445	0.18	-1.0
1,194,526	+		OKGIIK_05445	0.18	-1.9
1,194,526	+		OKGIIK_05445	0.18	+0.3
1,194,527	-		OKGIIK_05445	0.19	-1.4
1,194,527	-		OKGIIK_05445	0.19	-2.2
1,194,527	-		OKGIIK_05445	0.19	-0.3
1,194,527	-		OKGIIK_05445	0.19	+0.4
1,194,527	-		OKGIIK_05445	0.19	-0.3
1,194,527	-		OKGIIK_05445	0.19	+1.0
1,194,527	-		OKGIIK_05445	0.19	-1.0
1,194,529	+		OKGIIK_05445	0.19	-1.7
1,194,529	+		OKGIIK_05445	0.19	-0.4
1,194,529	+		OKGIIK_05445	0.19	-0.5
1,194,529	+		OKGIIK_05445	0.19	-1.3
1,194,530	-		OKGIIK_05445	0.19	+0.7
1,194,530	-		OKGIIK_05445	0.19	-1.7
1,194,582	+		OKGIIK_05445	0.22	-0.8
1,194,600	+		OKGIIK_05445	0.23	-0.0
1,194,601	-		OKGIIK_05445	0.23	+0.5
1,194,601	-		OKGIIK_05445	0.23	-1.3
1,194,601	-		OKGIIK_05445	0.23	-1.6
1,194,703	+		OKGIIK_05445	0.30	-0.6
1,194,703	+		OKGIIK_05445	0.30	+0.7
1,194,704	-		OKGIIK_05445	0.30	-0.4
1,194,704	-		OKGIIK_05445	0.30	+0.1
1,194,739	+		OKGIIK_05445	0.32	-0.6
1,194,739	+		OKGIIK_05445	0.32	+2.1
1,194,740	-		OKGIIK_05445	0.32	-1.8
1,194,916	+		OKGIIK_05445	0.44	+0.7
1,194,916	+		OKGIIK_05445	0.44	-1.2
1,194,916	+		OKGIIK_05445	0.44	+0.3
1,194,917	-		OKGIIK_05445	0.44	-0.8
1,194,917	-		OKGIIK_05445	0.44	-0.3