Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06338

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
105,869	-		MPMX19_06336	0.60	-0.9
105,869	-		MPMX19_06336	0.60	-0.4
106,019	-		MPMX19_06336	0.73	-0.7
106,030	+		MPMX19_06336	0.74	-0.0
106,030	+		MPMX19_06336	0.74	-1.5
106,030	+		MPMX19_06336	0.74	-1.2
106,042	+		MPMX19_06336	0.75	-1.5
106,042	+		MPMX19_06336	0.75	-0.8
106,043	-		MPMX19_06336	0.75	-0.0
106,043	-		MPMX19_06336	0.75	-1.0
106,043	-		MPMX19_06336	0.75	-0.9
106,287	+				-0.5
106,356	+				-1.0
106,356	+				-0.8
106,374	+				-0.8
106,374	+				-0.2
106,374	+				-0.5
106,374	+				-1.5
106,374	+				+0.6
106,374	+				-1.4
106,374	+				-0.4
106,375	-				-0.0
106,375	-				-0.4
106,375	-				-1.5
106,375	-				-1.0
106,375	-				-0.5
106,375	-				+0.4
106,375	-				-1.2
106,375	-				-0.9
106,375	-				-0.4
106,377	+				-0.6
106,377	+				-0.2
106,377	+				-0.2
106,377	+				-1.3
106,377	+				-1.5
106,377	+				-1.0
106,378	-				+0.6
106,378	-				-1.2
106,412	+				-0.0
106,412	+				-1.3
106,453	+				+1.2
106,453	+				+0.8
106,453	+				-0.2
106,484	-				-0.8
106,489	+				-2.0
106,490	-				-0.8
106,495	+				-0.6
106,495	+				-0.9
106,495	+				+1.5
106,495	+				-0.0
106,495	+				-0.2
106,495	+				+0.9
106,496	-				+1.0
106,496	-				-2.0
106,496	-				-0.8
106,496	-				-1.8
106,496	-				-0.5
106,496	-				+0.1
106,496	-				-1.1
106,528	-				-1.1
106,700	+		MPMX19_06337	0.58	-0.2
106,700	+		MPMX19_06337	0.58	+0.2
106,700	+		MPMX19_06337	0.58	-1.1
106,701	-		MPMX19_06337	0.58	+0.4
106,701	-		MPMX19_06337	0.58	-0.0
106,701	-		MPMX19_06337	0.58	-3.4
106,701	-		MPMX19_06337	0.58	-0.8
106,701	-		MPMX19_06337	0.58	-2.1
106,701	-		MPMX19_06337	0.58	-1.3
106,701	-		MPMX19_06337	0.58	-0.2
106,880	+				+0.5
106,881	-				-0.2
106,905	+				+0.2
106,906	-				-0.8
107,036	-		MPMX19_06338	0.18	+0.5
107,058	+		MPMX19_06338	0.20	-0.7
107,059	-		MPMX19_06338	0.20	+1.8
107,059	-		MPMX19_06338	0.20	-0.4
107,089	-		MPMX19_06338	0.23	+0.6
107,089	-		MPMX19_06338	0.23	+0.8
107,280	+		MPMX19_06338	0.43	-0.8
107,280	+		MPMX19_06338	0.43	+1.3
107,280	+		MPMX19_06338	0.43	+0.1
107,280	+		MPMX19_06338	0.43	+1.0
107,280	+		MPMX19_06338	0.43	+0.8
107,280	+		MPMX19_06338	0.43	-1.5
107,280	+		MPMX19_06338	0.43	+1.1
107,280	+		MPMX19_06338	0.43	+0.2
107,280	+		MPMX19_06338	0.43	-1.2
107,280	+		MPMX19_06338	0.43	+1.2
107,280	+		MPMX19_06338	0.43	-0.8
107,280	+		MPMX19_06338	0.43	-1.0
107,280	+		MPMX19_06338	0.43	-2.0
107,280	+		MPMX19_06338	0.43	-0.8
107,280	+		MPMX19_06338	0.43	+1.2
107,280	+		MPMX19_06338	0.43	+0.5
107,280	+		MPMX19_06338	0.43	+1.2
107,280	+		MPMX19_06338	0.43	+0.5
107,280	+		MPMX19_06338	0.43	-0.8
107,280	+		MPMX19_06338	0.43	+0.2
107,280	+		MPMX19_06338	0.43	-1.5
107,280	+		MPMX19_06338	0.43	+0.1
107,280	+		MPMX19_06338	0.43	+0.8
107,280	+		MPMX19_06338	0.43	-1.5
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	-0.0
107,281	-		MPMX19_06338	0.43	-1.0
107,281	-		MPMX19_06338	0.43	-0.8
107,281	-		MPMX19_06338	0.43	+0.8
107,281	-		MPMX19_06338	0.43	+0.2
107,281	-		MPMX19_06338	0.43	-0.5
107,281	-		MPMX19_06338	0.43	+0.0
107,281	-		MPMX19_06338	0.43	-0.8
107,281	-		MPMX19_06338	0.43	-1.1
107,281	-		MPMX19_06338	0.43	-0.2
107,281	-		MPMX19_06338	0.43	-0.6
107,281	-		MPMX19_06338	0.43	+1.4
107,281	-		MPMX19_06338	0.43	-1.4
107,281	-		MPMX19_06338	0.43	+1.2
107,281	-		MPMX19_06338	0.43	-0.5
107,281	-		MPMX19_06338	0.43	+0.4
107,300	+		MPMX19_06338	0.45	-1.3
107,300	+		MPMX19_06338	0.45	-0.2
107,300	+		MPMX19_06338	0.45	-0.4
107,300	+		MPMX19_06338	0.45	+1.1
107,301	-		MPMX19_06338	0.45	-1.3
107,349	+		MPMX19_06338	0.50	-1.4
107,349	+		MPMX19_06338	0.50	+0.1
107,349	+		MPMX19_06338	0.50	+0.0
107,349	+		MPMX19_06338	0.50	+0.6
107,349	+		MPMX19_06338	0.50	+0.4
107,349	+		MPMX19_06338	0.50	+0.1
107,350	-		MPMX19_06338	0.50	-0.8
107,350	-		MPMX19_06338	0.50	-0.2
107,350	-		MPMX19_06338	0.50	-0.3
107,350	-		MPMX19_06338	0.50	+0.4
107,350	-		MPMX19_06338	0.50	-0.7
107,350	-		MPMX19_06338	0.50	+1.8
107,361	+		MPMX19_06338	0.51	+0.7
107,361	+		MPMX19_06338	0.51	-0.2
107,361	+		MPMX19_06338	0.51	+0.5
107,361	+		MPMX19_06338	0.51	+0.6
107,361	+		MPMX19_06338	0.51	-0.0
107,361	+		MPMX19_06338	0.51	-0.4
107,361	+		MPMX19_06338	0.51	+1.8
107,362	-		MPMX19_06338	0.51	-2.0
107,362	-		MPMX19_06338	0.51	+1.5
107,362	-		MPMX19_06338	0.51	+0.7
107,362	-		MPMX19_06338	0.51	-2.8
107,362	-		MPMX19_06338	0.51	-1.0
107,362	-		MPMX19_06338	0.51	-1.0
107,362	-		MPMX19_06338	0.51	-0.2
107,362	-		MPMX19_06338	0.51	-0.3
107,433	+		MPMX19_06338	0.59	+0.5
107,434	-		MPMX19_06338	0.59	-2.0
107,478	+		MPMX19_06338	0.63	-0.5
107,478	+		MPMX19_06338	0.63	-1.6
107,478	+		MPMX19_06338	0.63	-1.4
107,479	-		MPMX19_06338	0.63	-0.5
107,479	-		MPMX19_06338	0.63	-2.0
107,479	-		MPMX19_06338	0.63	-0.2
107,520	+		MPMX19_06338	0.68	+0.4
107,520	+		MPMX19_06338	0.68	+0.5
107,520	+		MPMX19_06338	0.68	-0.2
107,520	+		MPMX19_06338	0.68	-0.7
107,521	-		MPMX19_06338	0.68	-0.5
107,521	-		MPMX19_06338	0.68	+0.0
107,521	-		MPMX19_06338	0.68	-1.0
107,521	-		MPMX19_06338	0.68	-0.5
107,521	-		MPMX19_06338	0.68	+0.7
107,521	-		MPMX19_06338	0.68	-0.3
107,521	-		MPMX19_06338	0.68	-0.2
107,547	+		MPMX19_06338	0.70	+0.1
107,547	+		MPMX19_06338	0.70	-1.0
107,547	+		MPMX19_06338	0.70	+0.1
107,547	+		MPMX19_06338	0.70	-0.8
107,547	+		MPMX19_06338	0.70	-1.5
107,547	+		MPMX19_06338	0.70	+0.4
107,698	+		MPMX19_06338	0.86	+0.9
107,699	-		MPMX19_06338	0.86	-0.5
107,699	-		MPMX19_06338	0.86	-0.5
107,699	-		MPMX19_06338	0.86	+0.2
107,805	+				-1.0
107,805	+				-1.6
107,805	+				-1.0
108,087	+				-1.8
108,087	+				+0.0
108,088	-				+0.6
108,088	-				+0.5
108,130	+				-0.6
108,130	+				-0.1
108,172	+				+0.7
108,172	+				+1.3
108,173	-				+0.8
108,173	-				-0.8
108,173	-				-0.2
108,173	-				+0.8
108,175	+				-2.3
108,175	+				+0.5
108,319	+		MPMX19_06340	0.37	-0.3
108,319	+		MPMX19_06340	0.37	-0.5
108,320	-		MPMX19_06340	0.37	-0.6
108,344	+		MPMX19_06340	0.53	-0.1
108,344	+		MPMX19_06340	0.53	-1.0
108,345	-		MPMX19_06340	0.54	-0.4
108,345	-		MPMX19_06340	0.54	-0.5
108,345	-		MPMX19_06340	0.54	-0.8
108,348	+		MPMX19_06340	0.56	-0.3
108,349	-		MPMX19_06340	0.57	+0.2
108,485	+				-2.3
108,485	+				+0.3
108,485	+				+0.5
108,486	-				-0.3
108,486	-				-0.3
108,606	+		MPMX19_06341	0.34	+0.7
108,606	+		MPMX19_06341	0.34	-0.6
108,606	+		MPMX19_06341	0.34	-0.1
108,606	+		MPMX19_06341	0.34	+0.2
108,606	+		MPMX19_06341	0.34	-0.0
108,606	+		MPMX19_06341	0.34	-0.1
108,606	+		MPMX19_06341	0.34	+0.6
108,606	+		MPMX19_06341	0.34	-0.4
108,607	-		MPMX19_06341	0.34	+0.4
108,607	-		MPMX19_06341	0.34	+0.8
108,607	-		MPMX19_06341	0.34	-0.5
108,607	-		MPMX19_06341	0.34	-0.8
108,607	-		MPMX19_06341	0.34	-1.0
108,607	-		MPMX19_06341	0.34	-0.4
108,607	-		MPMX19_06341	0.34	+0.0
108,607	-		MPMX19_06341	0.34	+0.6
108,825	-				+0.4