Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03675

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,112,215	+		MPMX19_03674	0.33	-0.9
1,112,215	+		MPMX19_03674	0.33	-0.4
1,112,215	+		MPMX19_03674	0.33	+1.3
1,112,215	+		MPMX19_03674	0.33	+0.9
1,112,215	+		MPMX19_03674	0.33	-0.8
1,112,216	-		MPMX19_03674	0.33	-2.7
1,112,227	-		MPMX19_03674	0.34	-1.2
1,112,308	+		MPMX19_03674	0.40	-0.9
1,112,308	+		MPMX19_03674	0.40	-2.2
1,112,308	+		MPMX19_03674	0.40	-1.2
1,112,308	+		MPMX19_03674	0.40	-0.2
1,112,308	+		MPMX19_03674	0.40	+0.3
1,112,308	+		MPMX19_03674	0.40	+0.3
1,112,309	-		MPMX19_03674	0.41	-1.5
1,112,309	-		MPMX19_03674	0.41	+0.1
1,112,309	-		MPMX19_03674	0.41	-0.9
1,112,309	-		MPMX19_03674	0.41	+1.0
1,112,309	-		MPMX19_03674	0.41	-0.2
1,112,309	-		MPMX19_03674	0.41	-1.0
1,112,309	-		MPMX19_03674	0.41	-0.7
1,112,323	+		MPMX19_03674	0.42	-2.7
1,112,323	+		MPMX19_03674	0.42	-0.4
1,112,323	+		MPMX19_03674	0.42	-0.4
1,112,323	+		MPMX19_03674	0.42	-0.5
1,112,323	+		MPMX19_03674	0.42	+0.6
1,112,323	+		MPMX19_03674	0.42	+1.5
1,112,324	-		MPMX19_03674	0.42	-0.9
1,112,324	-		MPMX19_03674	0.42	+0.4
1,112,493	+		MPMX19_03674	0.55	+0.2
1,112,557	+		MPMX19_03674	0.60	-0.4
1,112,557	+		MPMX19_03674	0.60	-0.7
1,112,557	+		MPMX19_03674	0.60	-0.4
1,112,557	+		MPMX19_03674	0.60	-1.3
1,112,557	+		MPMX19_03674	0.60	-1.5
1,112,557	+		MPMX19_03674	0.60	-0.1
1,112,558	-		MPMX19_03674	0.60	+0.5
1,112,558	-		MPMX19_03674	0.60	+0.1
1,112,558	-		MPMX19_03674	0.60	+0.8
1,112,558	-		MPMX19_03674	0.60	-0.7
1,112,558	-		MPMX19_03674	0.60	+0.6
1,112,558	-		MPMX19_03674	0.60	-0.5
1,112,558	-		MPMX19_03674	0.60	-0.5
1,112,662	+		MPMX19_03674	0.69	-1.3
1,112,663	-		MPMX19_03674	0.69	-1.4
1,112,663	-		MPMX19_03674	0.69	-0.4
1,112,663	-		MPMX19_03674	0.69	+1.3
1,112,698	+		MPMX19_03674	0.72	+0.3
1,112,698	+		MPMX19_03674	0.72	-0.7
1,112,698	+		MPMX19_03674	0.72	+0.7
1,112,698	+		MPMX19_03674	0.72	-0.1
1,112,698	+		MPMX19_03674	0.72	-1.3
1,112,698	+		MPMX19_03674	0.72	+0.2
1,112,698	+		MPMX19_03674	0.72	-0.4
1,112,698	+		MPMX19_03674	0.72	-0.2
1,112,698	+		MPMX19_03674	0.72	+2.1
1,112,698	+		MPMX19_03674	0.72	-2.3
1,112,699	-		MPMX19_03674	0.72	-0.1
1,112,699	-		MPMX19_03674	0.72	+0.3
1,112,699	-		MPMX19_03674	0.72	-1.9
1,112,699	-		MPMX19_03674	0.72	-0.7
1,112,699	-		MPMX19_03674	0.72	-1.4
1,112,699	-		MPMX19_03674	0.72	+0.2
1,112,699	-		MPMX19_03674	0.72	+0.3
1,112,699	-		MPMX19_03674	0.72	-0.7
1,112,699	-		MPMX19_03674	0.72	-0.8
1,112,700	+		MPMX19_03674	0.72	+0.1
1,112,700	+		MPMX19_03674	0.72	-1.2
1,112,700	+		MPMX19_03674	0.72	+0.3
1,112,700	+		MPMX19_03674	0.72	-0.5
1,112,701	-		MPMX19_03674	0.72	+0.5
1,112,701	-		MPMX19_03674	0.72	-0.6
1,112,701	-		MPMX19_03674	0.72	-1.4
1,112,701	-		MPMX19_03674	0.72	-1.1
1,112,701	-		MPMX19_03674	0.72	-0.4
1,112,701	-		MPMX19_03674	0.72	-0.7
1,112,710	+		MPMX19_03674	0.72	+0.1
1,112,710	+		MPMX19_03674	0.72	-0.4
1,112,710	+		MPMX19_03674	0.72	+1.1
1,112,710	+		MPMX19_03674	0.72	+0.3
1,112,710	+		MPMX19_03674	0.72	-0.4
1,112,710	+		MPMX19_03674	0.72	+0.2
1,112,711	-		MPMX19_03674	0.73	-0.5
1,112,711	-		MPMX19_03674	0.73	-1.7
1,112,711	-		MPMX19_03674	0.73	-0.7
1,112,711	-		MPMX19_03674	0.73	-1.8
1,112,713	+		MPMX19_03674	0.73	+1.9
1,112,713	+		MPMX19_03674	0.73	-1.9
1,112,713	+		MPMX19_03674	0.73	-1.6
1,112,713	+		MPMX19_03674	0.73	-0.5
1,112,713	+		MPMX19_03674	0.73	-0.1
1,112,713	+		MPMX19_03674	0.73	-0.3
1,112,713	+		MPMX19_03674	0.73	-0.2
1,112,713	+		MPMX19_03674	0.73	+0.4
1,112,713	+		MPMX19_03674	0.73	-0.4
1,112,714	-		MPMX19_03674	0.73	-0.8
1,112,714	-		MPMX19_03674	0.73	-1.4
1,112,714	-		MPMX19_03674	0.73	-0.1
1,112,714	-		MPMX19_03674	0.73	-0.5
1,112,714	-		MPMX19_03674	0.73	+0.6
1,112,714	-		MPMX19_03674	0.73	-0.8
1,112,714	-		MPMX19_03674	0.73	+0.1
1,112,714	-		MPMX19_03674	0.73	+0.1
1,112,714	-		MPMX19_03674	0.73	-0.6
1,112,773	+		MPMX19_03674	0.78	+0.3
1,112,773	+		MPMX19_03674	0.78	-1.2
1,112,872	+		MPMX19_03674	0.85	-0.4
1,112,950	+				+0.5
1,112,950	+				-0.2
1,112,984	-				-0.4
1,113,390	+		MPMX19_03675	0.29	-1.7
1,113,390	+		MPMX19_03675	0.29	-1.2
1,113,390	+		MPMX19_03675	0.29	-0.4
1,113,390	+		MPMX19_03675	0.29	-0.8
1,113,390	+		MPMX19_03675	0.29	+0.1
1,113,390	+		MPMX19_03675	0.29	-0.9
1,113,390	+		MPMX19_03675	0.29	-3.0
1,113,390	+		MPMX19_03675	0.29	-1.7
1,113,390	+		MPMX19_03675	0.29	-1.4
1,113,390	+		MPMX19_03675	0.29	+0.5
1,113,391	-		MPMX19_03675	0.29	-1.5
1,113,391	-		MPMX19_03675	0.29	-1.5
1,113,391	-		MPMX19_03675	0.29	+0.4
1,113,391	-		MPMX19_03675	0.29	-1.0
1,113,391	-		MPMX19_03675	0.29	+0.6
1,113,391	-		MPMX19_03675	0.29	+0.4
1,113,391	-		MPMX19_03675	0.29	-2.6
1,113,477	+		MPMX19_03675	0.36	-0.4
1,113,477	+		MPMX19_03675	0.36	-0.5
1,113,477	+		MPMX19_03675	0.36	-0.2
1,113,478	-		MPMX19_03675	0.36	+0.1
1,113,478	-		MPMX19_03675	0.36	+0.5
1,113,478	-		MPMX19_03675	0.36	-0.5
1,113,478	-		MPMX19_03675	0.36	+0.2
1,113,478	-		MPMX19_03675	0.36	-1.8
1,113,478	-		MPMX19_03675	0.36	-0.0
1,113,591	+		MPMX19_03675	0.46	-0.2
1,113,591	+		MPMX19_03675	0.46	+0.4
1,113,591	+		MPMX19_03675	0.46	+0.2
1,113,591	+		MPMX19_03675	0.46	-0.2
1,113,592	-		MPMX19_03675	0.46	+0.7
1,113,592	-		MPMX19_03675	0.46	-0.5
1,113,592	-		MPMX19_03675	0.46	+0.8
1,113,592	-		MPMX19_03675	0.46	-0.7
1,113,621	+		MPMX19_03675	0.49	-0.2
1,113,622	-		MPMX19_03675	0.49	-1.1
1,113,622	-		MPMX19_03675	0.49	-2.4
1,113,622	-		MPMX19_03675	0.49	-0.7
1,113,622	-		MPMX19_03675	0.49	+0.1
1,113,664	-		MPMX19_03675	0.52	-0.8
1,113,774	+		MPMX19_03675	0.62	-0.8
1,113,774	+		MPMX19_03675	0.62	-1.5
1,113,851	+		MPMX19_03675	0.69	-0.0
1,113,851	+		MPMX19_03675	0.69	-1.9
1,113,851	+		MPMX19_03675	0.69	-0.9
1,113,851	+		MPMX19_03675	0.69	-0.4
1,113,851	+		MPMX19_03675	0.69	+0.4
1,114,116	+				+0.3
1,114,116	+				-0.3
1,114,116	+				-0.5
1,114,116	+				-0.8
1,114,116	+				-0.0
1,114,116	+				-0.1
1,114,117	-				+0.6
1,114,117	-				+0.3
1,114,117	-				-0.4
1,114,122	+				-0.1
1,114,122	+				-0.5
1,114,122	+				+0.6
1,114,122	+				-0.9
1,114,122	+				-0.6
1,114,122	+				-1.1
1,114,122	+				-0.9
1,114,122	+				-1.2
1,114,122	+				+0.5
1,114,122	+				+0.6
1,114,122	+				-0.9
1,114,122	+				+0.3
1,114,122	+				-0.5
1,114,122	+				-2.1
1,114,123	-				+0.8
1,114,123	-				-0.4
1,114,123	-				-0.7
1,114,123	-				-0.4
1,114,123	-				-2.6
1,114,123	-				-0.9
1,114,123	-				+0.3
1,114,123	-				+0.6
1,114,123	-				+0.5
1,114,123	-				-0.5
1,114,254	+				-1.1
1,114,254	+				-1.9
1,114,254	+				+0.2
1,114,255	-				-0.9
1,114,392	+		MPMX19_03676	0.13	-0.3
1,114,402	+		MPMX19_03676	0.16	+0.5
1,114,402	+		MPMX19_03676	0.16	-0.7
1,114,403	-		MPMX19_03676	0.16	-0.4
1,114,533	+		MPMX19_03676	0.46	-0.1
1,114,533	+		MPMX19_03676	0.46	-0.9
1,114,533	+		MPMX19_03676	0.46	+0.1
1,114,533	+		MPMX19_03676	0.46	-1.5
1,114,534	-		MPMX19_03676	0.46	-0.7
1,114,534	-		MPMX19_03676	0.46	+1.4
1,114,534	-		MPMX19_03676	0.46	+0.3
1,114,955	+		MPMX19_03677	0.16	-1.4
1,114,955	+		MPMX19_03677	0.16	-0.5
1,114,955	+		MPMX19_03677	0.16	-0.1
1,114,955	+		MPMX19_03677	0.16	+0.1
1,114,955	+		MPMX19_03677	0.16	-0.4
1,114,955	+		MPMX19_03677	0.16	-0.9
1,114,955	+		MPMX19_03677	0.16	-0.6
1,114,955	+		MPMX19_03677	0.16	+1.1
1,114,955	+		MPMX19_03677	0.16	-0.8
1,114,955	+		MPMX19_03677	0.16	-1.4
1,114,956	-		MPMX19_03677	0.16	-1.0
1,114,956	-		MPMX19_03677	0.16	-0.2
1,114,956	-		MPMX19_03677	0.16	-1.2
1,114,956	-		MPMX19_03677	0.16	-1.7
1,114,956	-		MPMX19_03677	0.16	-2.3
1,114,956	-		MPMX19_03677	0.16	-2.4
1,114,956	-		MPMX19_03677	0.16	-0.4
1,114,956	-		MPMX19_03677	0.16	-2.4
1,114,956	-		MPMX19_03677	0.16	-0.4
1,114,956	-		MPMX19_03677	0.16	+0.4
1,114,956	-		MPMX19_03677	0.16	-1.1
1,114,956	-		MPMX19_03677	0.16	-0.7
1,114,956	-		MPMX19_03677	0.16	-1.4