Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02711

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,841,738	+		MPMX19_02709	0.41	+0.0
2,841,738	+		MPMX19_02709	0.41	-1.5
2,841,738	+		MPMX19_02709	0.41	+0.9
2,841,738	+		MPMX19_02709	0.41	-0.1
2,841,738	+		MPMX19_02709	0.41	-0.1
2,841,738	+		MPMX19_02709	0.41	+0.3
2,841,738	+		MPMX19_02709	0.41	+1.2
2,841,739	-		MPMX19_02709	0.41	-1.2
2,841,739	-		MPMX19_02709	0.41	-0.3
2,841,739	-		MPMX19_02709	0.41	+2.1
2,841,739	-		MPMX19_02709	0.41	+0.9
2,841,739	-		MPMX19_02709	0.41	-0.7
2,841,776	+		MPMX19_02709	0.46	+0.9
2,841,776	+		MPMX19_02709	0.46	-0.2
2,841,777	-		MPMX19_02709	0.46	+0.3
2,841,777	-		MPMX19_02709	0.46	+0.7
2,841,851	+		MPMX19_02709	0.54	-0.1
2,841,851	+		MPMX19_02709	0.54	-0.6
2,841,852	-		MPMX19_02709	0.54	-0.2
2,841,852	-		MPMX19_02709	0.54	-0.2
2,841,892	+		MPMX19_02709	0.59	-2.3
2,841,892	+		MPMX19_02709	0.59	-0.9
2,841,892	+		MPMX19_02709	0.59	+0.6
2,841,893	-		MPMX19_02709	0.59	+0.2
2,841,893	-		MPMX19_02709	0.59	+0.3
2,841,893	-		MPMX19_02709	0.59	-1.8
2,841,893	-		MPMX19_02709	0.59	+0.5
2,841,893	-		MPMX19_02709	0.59	-0.8
2,841,904	+		MPMX19_02709	0.60	-0.5
2,842,078	+		MPMX19_02709	0.79	-1.4
2,842,078	+		MPMX19_02709	0.79	-0.9
2,842,078	+		MPMX19_02709	0.79	+1.3
2,842,078	+		MPMX19_02709	0.79	+0.5
2,842,078	+		MPMX19_02709	0.79	-0.7
2,842,079	-		MPMX19_02709	0.79	+1.0
2,842,411	+		MPMX19_02710	0.60	+0.9
2,842,411	+		MPMX19_02710	0.60	-0.1
2,842,411	+		MPMX19_02710	0.60	-0.5
2,842,411	+		MPMX19_02710	0.60	-1.8
2,842,411	+		MPMX19_02710	0.60	-2.0
2,842,411	+		MPMX19_02710	0.60	+2.5
2,842,411	+		MPMX19_02710	0.60	-0.1
2,842,411	+		MPMX19_02710	0.60	-0.9
2,842,411	+		MPMX19_02710	0.60	-0.1
2,842,411	+		MPMX19_02710	0.60	-1.5
2,842,411	+		MPMX19_02710	0.60	+0.9
2,842,411	+		MPMX19_02710	0.60	-1.9
2,842,411	+		MPMX19_02710	0.60	-0.9
2,842,411	+		MPMX19_02710	0.60	-0.9
2,842,411	+		MPMX19_02710	0.60	+0.6
2,842,411	+		MPMX19_02710	0.60	+0.5
2,842,411	+		MPMX19_02710	0.60	+1.1
2,842,411	+		MPMX19_02710	0.60	-2.7
2,842,411	+		MPMX19_02710	0.60	+0.9
2,842,411	+		MPMX19_02710	0.60	-0.4
2,842,412	-		MPMX19_02710	0.61	+0.9
2,842,412	-		MPMX19_02710	0.61	-1.3
2,842,412	-		MPMX19_02710	0.61	+1.1
2,842,412	-		MPMX19_02710	0.61	+0.0
2,842,412	-		MPMX19_02710	0.61	-0.6
2,842,412	-		MPMX19_02710	0.61	+1.9
2,842,412	-		MPMX19_02710	0.61	+0.3
2,842,412	-		MPMX19_02710	0.61	-1.6
2,842,412	-		MPMX19_02710	0.61	-0.5
2,842,412	-		MPMX19_02710	0.61	+1.0
2,842,412	-		MPMX19_02710	0.61	-1.5
2,842,412	-		MPMX19_02710	0.61	-2.2
2,842,412	-		MPMX19_02710	0.61	+0.5
2,842,412	-		MPMX19_02710	0.61	-0.7
2,842,412	-		MPMX19_02710	0.61	-0.1
2,842,412	-		MPMX19_02710	0.61	-0.0
2,842,412	-		MPMX19_02710	0.61	+0.9
2,842,413	+		MPMX19_02710	0.61	+0.1
2,842,413	+		MPMX19_02710	0.61	-0.1
2,842,413	+		MPMX19_02710	0.61	-0.1
2,842,414	-		MPMX19_02710	0.62	-1.5
2,842,414	-		MPMX19_02710	0.62	+2.3
2,842,414	-		MPMX19_02710	0.62	+0.1
2,842,450	+		MPMX19_02710	0.82	-0.1
2,842,450	+		MPMX19_02710	0.82	+0.2
2,842,450	+		MPMX19_02710	0.82	-0.4
2,842,450	+		MPMX19_02710	0.82	+0.3
2,842,450	+		MPMX19_02710	0.82	+0.9
2,842,450	+		MPMX19_02710	0.82	-1.0
2,842,450	+		MPMX19_02710	0.82	-2.0
2,842,450	+		MPMX19_02710	0.82	-1.1
2,842,450	+		MPMX19_02710	0.82	+0.2
2,842,450	+		MPMX19_02710	0.82	-0.6
2,842,450	+		MPMX19_02710	0.82	-0.3
2,842,450	+		MPMX19_02710	0.82	-0.3
2,842,451	-		MPMX19_02710	0.82	+0.2
2,842,451	-		MPMX19_02710	0.82	-1.7
2,842,451	-		MPMX19_02710	0.82	-0.5
2,842,451	-		MPMX19_02710	0.82	-0.2
2,842,451	-		MPMX19_02710	0.82	+3.9
2,842,451	-		MPMX19_02710	0.82	-1.5
2,842,451	-		MPMX19_02710	0.82	+1.2
2,842,471	+				-2.0
2,842,471	+				+0.3
2,842,471	+				+0.5
2,842,471	+				-0.0
2,842,471	+				-0.7
2,842,471	+				-2.5
2,842,471	+				-1.3
2,842,471	+				-1.7
2,842,471	+				-0.0
2,842,471	+				+0.9
2,842,471	+				-0.4
2,842,471	+				-0.0
2,842,471	+				-0.1
2,842,471	+				-0.1
2,842,472	-				+0.6
2,842,472	-				-2.2
2,842,472	-				+0.9
2,842,472	-				+0.3
2,842,472	-				+0.5
2,842,472	-				-0.5
2,842,472	-				+0.5
2,842,472	-				-1.3
2,842,472	-				-1.3
2,842,472	-				+0.5
2,842,472	-				+0.3
2,842,472	-				-0.1
2,842,473	+				+1.0
2,842,473	+				-0.0
2,842,473	+				-0.9
2,842,473	+				-1.9
2,842,473	+				-0.8
2,842,473	+				+1.4
2,842,473	+				+1.5
2,842,473	+				-0.6
2,842,473	+				-1.1
2,842,473	+				+0.3
2,842,473	+				-0.4
2,842,473	+				+1.9
2,842,473	+				-0.3
2,842,473	+				-0.3
2,842,473	+				+0.1
2,842,473	+				+0.2
2,842,473	+				+0.0
2,842,473	+				-0.4
2,842,473	+				-1.7
2,842,473	+				+0.2
2,842,473	+				-1.0
2,842,473	+				-0.1
2,842,473	+				-1.7
2,842,473	+				-1.7
2,842,474	-				-0.8
2,842,474	-				+0.5
2,842,474	-				-1.8
2,842,474	-				-0.3
2,842,474	-				+0.3
2,842,474	-				-1.4
2,842,474	-				-0.3
2,842,474	-				-0.1
2,842,474	-				+0.3
2,842,474	-				-0.6
2,842,474	-				-1.0
2,842,474	-				-0.1
2,842,474	-				-0.7
2,842,474	-				+0.9
2,842,474	-				-0.7
2,842,474	-				+0.9
2,842,474	-				-0.5
2,842,474	-				-0.6
2,842,474	-				+1.1
2,842,474	-				-0.5
2,842,474	-				-0.2
2,842,474	-				-1.3
2,842,474	-				-1.6
2,842,474	-				-1.7
2,842,480	+				-0.6
2,842,480	+				-1.0
2,842,480	+				-1.1
2,842,480	+				+0.3
2,842,480	+				+0.9
2,842,480	+				+2.9
2,842,480	+				+0.9
2,842,480	+				-0.9
2,842,480	+				+0.2
2,842,480	+				-0.8
2,842,480	+				-0.9
2,842,480	+				+1.9
2,842,480	+				-0.2
2,842,480	+				+0.5
2,842,480	+				+0.6
2,842,481	-				-0.6
2,842,481	-				+1.1
2,842,481	-				+0.1
2,842,481	-				+0.3
2,842,481	-				+0.7
2,842,481	-				-0.5
2,842,481	-				+0.2
2,842,481	-				-1.9
2,842,481	-				+1.7
2,842,481	-				-0.6
2,842,481	-				-1.5
2,842,481	-				-0.8
2,842,481	-				+0.5
2,842,515	+				+1.0
2,842,516	-				+0.3
2,842,516	-				+1.5
2,842,537	+				-1.1
2,842,537	+				-1.2
2,842,537	+				-0.6
2,842,537	+				-0.6
2,842,537	+				+0.5
2,842,537	+				-0.0
2,842,537	+				+0.1
2,842,538	-				+1.1
2,842,538	-				+0.4
2,842,538	-				+0.1
2,842,538	-				-0.7
2,842,538	-				-0.9
2,842,538	-				-0.1
2,842,601	+				+0.1
2,842,601	+				-2.9
2,842,601	+				+0.1
2,842,601	+				-1.6
2,842,601	+				+0.5
2,842,601	+				-0.4
2,842,601	+				+0.3
2,842,601	+				-0.6
2,842,601	+				-0.5
2,842,602	-				-0.9
2,842,602	-				-1.3
2,842,602	-				+0.1
2,842,602	-				+0.5
2,842,602	-				-0.8
2,842,602	-				-1.7
2,842,602	-				-0.1
2,842,602	-				-1.3
2,842,627	+				+0.3
2,842,627	+				-0.8
2,842,627	+				+1.2
2,842,627	+				-1.5
2,842,627	+				+1.0
2,842,627	+				-0.0
2,842,627	+				-0.8
2,842,628	-				+1.0
2,842,628	-				-1.7
2,842,628	-				-1.3
2,842,628	-				-1.6
2,842,688	+				-0.0
2,842,689	-				-0.9
2,842,931	+		MPMX19_02711	0.33	-0.9
2,842,931	+		MPMX19_02711	0.33	+1.1
2,842,931	+		MPMX19_02711	0.33	-1.2
2,842,931	+		MPMX19_02711	0.33	-0.9
2,842,932	-		MPMX19_02711	0.33	+0.3
2,842,932	-		MPMX19_02711	0.33	-0.6
2,842,932	-		MPMX19_02711	0.33	+0.1
2,842,932	-		MPMX19_02711	0.33	-0.7
2,842,932	-		MPMX19_02711	0.33	-0.0
2,842,932	-		MPMX19_02711	0.33	+0.1
2,842,932	-		MPMX19_02711	0.33	-0.8
2,843,109	+		MPMX19_02711	0.61	-0.5
2,843,109	+		MPMX19_02711	0.61	+0.1
2,843,109	+		MPMX19_02711	0.61	-0.2
2,843,109	+		MPMX19_02711	0.61	-1.3
2,843,109	+		MPMX19_02711	0.61	-0.9
2,843,109	+		MPMX19_02711	0.61	-1.2
2,843,109	+		MPMX19_02711	0.61	-0.2
2,843,109	+		MPMX19_02711	0.61	-0.3
2,843,110	-		MPMX19_02711	0.61	-2.2
2,843,110	-		MPMX19_02711	0.61	+0.3
2,843,110	-		MPMX19_02711	0.61	-1.4
2,843,110	-		MPMX19_02711	0.61	-1.1
2,843,110	-		MPMX19_02711	0.61	-0.1
2,843,154	+		MPMX19_02711	0.68	-0.9
2,843,154	+		MPMX19_02711	0.68	-0.7
2,843,155	-		MPMX19_02711	0.68	-2.1
2,843,351	+				+0.5
2,843,351	+				-0.2
2,843,351	+				-1.8
2,843,351	+				+0.5
2,843,351	+				+0.2
2,843,351	+				+1.3
2,843,351	+				-2.6
2,843,351	+				+0.0
2,843,351	+				-0.4
2,843,351	+				-0.3
2,843,351	+				-1.1
2,843,351	+				-0.2
2,843,351	+				+0.5
2,843,351	+				+0.1
2,843,352	-				-0.9
2,843,352	-				-0.5
2,843,352	-				+0.5
2,843,352	-				-0.2
2,843,353	+				-0.1
2,843,353	+				-1.1
2,843,353	+				-1.6
2,843,353	+				+0.4
2,843,353	+				-0.9
2,843,353	+				-1.1
2,843,353	+				+0.6
2,843,353	+				+1.2
2,843,353	+				-0.7
2,843,353	+				-1.5
2,843,353	+				-1.0
2,843,353	+				-0.4
2,843,353	+				-1.7
2,843,353	+				+0.2
2,843,354	-				-0.0
2,843,354	-				+0.3
2,843,354	-				+0.6
2,843,354	-				-1.9
2,843,354	-				+1.1
2,843,354	-				+1.9
2,843,354	-				+0.5
2,843,354	-				-0.2
2,843,354	-				+0.1
2,843,354	-				+0.1
2,843,354	-				+0.3
2,843,354	-				+0.5
2,843,354	-				-0.7
2,843,354	-				-0.7
2,843,354	-				-0.9
2,843,354	-				-1.3
2,843,354	-				-1.0
2,843,388	+				-1.3
2,843,388	+				-0.9
2,843,388	+				-1.1
2,843,388	+				-1.6
2,843,388	+				-0.1
2,843,388	+				+1.1
2,843,389	-				-0.7
2,843,389	-				-1.6
2,843,389	-				+0.8
2,843,389	-				-0.1
2,843,389	-				-1.5
2,843,389	-				-1.5
2,843,389	-				-0.5
2,843,389	-				-0.6
2,843,389	-				-1.0
2,843,408	+				-0.3
2,843,408	+				+0.3
2,843,409	-				+0.3
2,843,413	+				-0.1
2,843,413	+				-0.6
2,843,413	+				-0.7
2,843,413	+				-0.9
2,843,413	+				+1.1
2,843,413	+				-2.0
2,843,413	+				-0.0
2,843,413	+				-0.8
2,843,413	+				-0.1
2,843,414	-				+0.1
2,843,414	-				+1.3
2,843,414	-				+0.7
2,843,414	-				+0.1
2,843,440	+				+0.1
2,843,440	+				-0.8
2,843,440	+				-0.5
2,843,440	+				-0.8
2,843,440	+				-0.6
2,843,441	-				-0.3
2,843,441	-				+0.5
2,843,474	+				+1.7
2,843,474	+				+0.9
2,843,474	+				-1.5
2,843,474	+				-0.5
2,843,474	+				-0.5
2,843,474	+				-0.2
2,843,474	+				-1.8
2,843,474	+				-1.4
2,843,474	+				-0.1
2,843,474	+				+0.2
2,843,474	+				-0.5
2,843,474	+				-1.2
2,843,474	+				-0.9
2,843,474	+				-0.0
2,843,474	+				-0.6
2,843,474	+				-1.5
2,843,474	+				-2.4
2,843,474	+				-0.8
2,843,474	+				-1.1
2,843,474	+				-1.5
2,843,474	+				+0.5
2,843,475	-				-0.0
2,843,475	-				-2.5
2,843,475	-				-0.6
2,843,475	-				-2.1
2,843,475	-				+0.0
2,843,475	-				+0.9
2,843,475	-				-0.8
2,843,475	-				-1.0
2,843,475	-				+0.1
2,843,475	-				-0.3
2,843,475	-				+0.9
2,843,475	-				+0.5
2,843,475	-				-0.5
2,843,475	-				+1.1
2,843,475	-				+0.8
2,843,475	-				+0.2
2,843,475	-				-1.6
2,843,475	-				+0.3
2,843,475	-				-0.1
2,843,475	-				+0.3
2,843,475	-				+0.7
2,843,475	-				+2.1
2,843,475	-				+0.3
2,843,475	-				+0.6
2,843,475	-				-0.5
2,843,475	-				-0.5
2,843,475	-				-0.8
2,843,475	-				-0.1
2,843,480	+				+1.3
2,843,501	+				+1.0
2,843,501	+				+1.6
2,843,501	+				-1.0
2,843,528	+				+0.4
2,843,529	-				-0.7
2,843,548	+				-0.3
2,843,548	+				+0.2
2,843,548	+				-0.4
2,843,548	+				-1.2
2,843,548	+				-0.0
2,843,548	+				-0.9
2,843,548	+				-0.2
2,843,548	+				+0.3
2,843,548	+				+0.4
2,843,548	+				+0.9
2,843,548	+				+0.2
2,843,549	-				-1.6
2,843,549	-				+0.1
2,843,549	-				+0.4
2,843,549	-				-1.1
2,843,549	-				-0.8
2,843,549	-				-1.6
2,843,549	-				-1.1
2,843,549	-				-0.3
2,843,549	-				+0.6
2,843,553	-				-0.5
2,843,553	-				-1.9
2,843,553	-				+0.5
2,843,569	+				-1.1
2,843,570	-				-2.7
2,843,598	+				+0.7
2,843,598	+				-1.1
2,843,598	+				+0.6
2,843,598	+				-0.8
2,843,598	+				+0.1
2,843,598	+				+0.3
2,843,599	-				-0.0
2,843,599	-				+0.4
2,843,639	+				-2.1
2,843,639	+				-0.5
2,843,639	+				-1.1
2,843,640	-				-0.7
2,843,696	+				+0.5
2,843,696	+				-0.1
2,843,696	+				-0.5
2,843,696	+				+0.3
2,843,696	+				-0.5
2,843,696	+				-0.1
2,843,696	+				+0.2
2,843,697	-				+0.3
2,843,697	-				+0.7
2,843,697	-				-0.8
2,843,830	+		MPMX19_02712	0.11	+2.1
2,843,830	+		MPMX19_02712	0.11	+1.2
2,843,831	-		MPMX19_02712	0.11	+1.5
2,843,831	-		MPMX19_02712	0.11	-0.3
2,843,869	-		MPMX19_02712	0.13	+0.4
2,843,869	-		MPMX19_02712	0.13	+0.3
2,843,869	-		MPMX19_02712	0.13	-2.1
2,843,869	-		MPMX19_02712	0.13	-0.1
2,843,954	+		MPMX19_02712	0.18	+1.9
2,843,955	-		MPMX19_02712	0.18	+0.1
2,843,996	+		MPMX19_02712	0.21	+0.6
2,843,996	+		MPMX19_02712	0.21	-1.0
2,843,997	-		MPMX19_02712	0.21	+0.6
2,843,997	-		MPMX19_02712	0.21	-1.6
2,844,154	+		MPMX19_02712	0.30	-2.0
2,844,154	+		MPMX19_02712	0.30	+0.3
2,844,154	+		MPMX19_02712	0.30	-0.5
2,844,154	+		MPMX19_02712	0.30	-0.4
2,844,155	-		MPMX19_02712	0.30	+0.9
2,844,155	-		MPMX19_02712	0.30	+0.1
2,844,155	-		MPMX19_02712	0.30	-0.1
2,844,155	-		MPMX19_02712	0.30	-0.8
2,844,155	-		MPMX19_02712	0.30	+0.7
2,844,155	-		MPMX19_02712	0.30	-2.2
2,844,155	-		MPMX19_02712	0.30	-1.3
2,844,155	-		MPMX19_02712	0.30	+1.1
2,844,155	-		MPMX19_02712	0.30	+0.9
2,844,155	-		MPMX19_02712	0.30	-1.8
2,844,155	-		MPMX19_02712	0.30	-0.7
2,844,155	-		MPMX19_02712	0.30	-1.2
2,844,155	-		MPMX19_02712	0.30	+0.1
2,844,168	+		MPMX19_02712	0.31	+0.4
2,844,168	+		MPMX19_02712	0.31	-0.5
2,844,168	+		MPMX19_02712	0.31	-0.8
2,844,168	+		MPMX19_02712	0.31	+0.6
2,844,168	+		MPMX19_02712	0.31	+0.2
2,844,168	+		MPMX19_02712	0.31	+1.2
2,844,169	-		MPMX19_02712	0.31	-0.9
2,844,169	-		MPMX19_02712	0.31	-1.0
2,844,169	-		MPMX19_02712	0.31	+2.3
2,844,169	-		MPMX19_02712	0.31	-0.2
2,844,169	-		MPMX19_02712	0.31	-0.5
2,844,169	-		MPMX19_02712	0.31	-0.4
2,844,175	+		MPMX19_02712	0.31	-2.2
2,844,175	+		MPMX19_02712	0.31	-0.5
2,844,175	+		MPMX19_02712	0.31	-1.0
2,844,175	+		MPMX19_02712	0.31	+0.6
2,844,175	+		MPMX19_02712	0.31	-1.6
2,844,176	-		MPMX19_02712	0.31	-2.0
2,844,176	-		MPMX19_02712	0.31	+1.6
2,844,178	+		MPMX19_02712	0.31	-0.3
2,844,178	+		MPMX19_02712	0.31	+0.9
2,844,178	+		MPMX19_02712	0.31	+0.9
2,844,178	+		MPMX19_02712	0.31	+0.5
2,844,178	+		MPMX19_02712	0.31	-0.7
2,844,178	+		MPMX19_02712	0.31	-2.2
2,844,178	+		MPMX19_02712	0.31	-0.9
2,844,178	+		MPMX19_02712	0.31	+0.1
2,844,178	+		MPMX19_02712	0.31	+0.3
2,844,178	+		MPMX19_02712	0.31	-0.1
2,844,178	+		MPMX19_02712	0.31	+1.7
2,844,178	+		MPMX19_02712	0.31	+0.3
2,844,178	+		MPMX19_02712	0.31	-0.5
2,844,178	+		MPMX19_02712	0.31	+0.2
2,844,179	-		MPMX19_02712	0.31	-0.3
2,844,179	-		MPMX19_02712	0.31	-0.5
2,844,179	-		MPMX19_02712	0.31	-0.7
2,844,179	-		MPMX19_02712	0.31	+0.5
2,844,179	-		MPMX19_02712	0.31	+0.3
2,844,179	-		MPMX19_02712	0.31	+2.2
2,844,226	+		MPMX19_02712	0.34	+0.0
2,844,226	+		MPMX19_02712	0.34	+0.4
2,844,226	+		MPMX19_02712	0.34	+0.1
2,844,226	+		MPMX19_02712	0.34	+0.0
2,844,227	-		MPMX19_02712	0.34	-0.5
2,844,227	-		MPMX19_02712	0.34	-0.1
2,844,227	-		MPMX19_02712	0.34	-0.1
2,844,227	-		MPMX19_02712	0.34	-0.8
2,844,264	-		MPMX19_02712	0.36	+0.7
2,844,264	-		MPMX19_02712	0.36	-0.7
2,844,299	+		MPMX19_02712	0.38	-1.1