Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02515

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,631,513	+		MPMX19_02514	0.29	+0.5
2,631,513	+		MPMX19_02514	0.29	+0.9
2,631,513	+		MPMX19_02514	0.29	+0.6
2,631,514	-		MPMX19_02514	0.29	-0.7
2,631,514	-		MPMX19_02514	0.29	+0.9
2,632,189	+				-0.2
2,632,189	+				-0.4
2,632,189	+				-0.5
2,632,189	+				-0.4
2,632,189	+				-0.9
2,632,189	+				-0.6
2,632,189	+				-0.4
2,632,190	-				-1.8
2,632,190	-				-0.7
2,632,190	-				-0.0
2,632,190	-				+0.3
2,632,190	-				-1.6
2,632,190	-				-0.9
2,632,397	+				-0.3
2,632,397	+				-1.0
2,632,397	+				-0.7
2,632,397	+				-0.0
2,632,397	+				-0.2
2,632,397	+				+0.5
2,632,397	+				-0.5
2,632,397	+				+2.3
2,632,397	+				-0.5
2,632,397	+				+1.2
2,632,397	+				+0.1
2,632,397	+				-0.9
2,632,397	+				-0.7
2,632,397	+				-0.7
2,632,397	+				-0.6
2,632,397	+				-0.1
2,632,397	+				+1.1
2,632,397	+				-0.1
2,632,397	+				+0.0
2,632,397	+				-0.1
2,632,397	+				+0.3
2,632,397	+				-1.5
2,632,397	+				+0.7
2,632,397	+				+1.3
2,632,397	+				+0.7
2,632,397	+				-1.6
2,632,397	+				+0.5
2,632,397	+				+0.0
2,632,397	+				-1.6
2,632,397	+				+0.7
2,632,397	+				-1.1
2,632,397	+				-0.7
2,632,397	+				+0.5
2,632,397	+				-0.0
2,632,397	+				-0.5
2,632,397	+				-1.6
2,632,397	+				-0.2
2,632,397	+				-0.3
2,632,397	+				+0.3
2,632,397	+				+1.5
2,632,397	+				+0.5
2,632,397	+				-0.4
2,632,397	+				-0.7
2,632,398	-				-0.9
2,632,398	-				-1.1
2,632,398	-				-0.3
2,632,398	-				+0.1
2,632,398	-				-0.4
2,632,398	-				+1.6
2,632,398	-				-0.4
2,632,398	-				-1.1
2,632,398	-				-0.0
2,632,398	-				-0.7
2,632,398	-				-0.3
2,632,398	-				-0.7
2,632,398	-				+0.1
2,632,398	-				-0.2
2,632,398	-				+0.3
2,632,398	-				+0.5
2,632,398	-				-1.5
2,632,398	-				-0.2
2,632,398	-				-0.9
2,632,398	-				+0.5
2,632,398	-				+0.3
2,632,398	-				-0.2
2,632,398	-				-0.7
2,632,398	-				+0.3
2,632,398	-				-0.8
2,632,398	-				-0.7
2,632,398	-				-1.1
2,632,398	-				-0.7
2,632,398	-				+0.1
2,632,398	-				-0.5
2,632,398	-				+0.4
2,632,398	-				-1.8
2,632,398	-				-1.5
2,632,401	+				-0.1
2,632,401	+				+0.2
2,632,401	+				-0.3
2,632,401	+				-2.0
2,632,401	+				+0.1
2,632,401	+				-0.5
2,632,401	+				-0.5
2,632,401	+				-0.3
2,632,401	+				-0.5
2,632,401	+				+0.4
2,632,401	+				-2.1
2,632,401	+				+0.9
2,632,401	+				-1.1
2,632,401	+				-0.5
2,632,402	-				-0.7
2,632,402	-				-0.5
2,632,402	-				+0.3
2,632,402	-				-0.1
2,632,402	-				+0.7
2,632,402	-				-0.9
2,632,402	-				-0.7
2,632,402	-				-1.3
2,632,402	-				-0.5
2,632,402	-				-1.2
2,632,402	-				-0.0
2,632,402	-				-0.9
2,632,402	-				-1.3
2,632,402	-				-0.1
2,632,402	-				-1.7
2,632,402	-				-0.8
2,632,402	-				-0.3
2,632,402	-				-1.2
2,632,724	+		MPMX19_02515	0.16	+0.5
2,632,724	+		MPMX19_02515	0.16	+0.7
2,632,724	+		MPMX19_02515	0.16	-0.3
2,632,724	+		MPMX19_02515	0.16	-2.3
2,632,724	+		MPMX19_02515	0.16	+1.5
2,632,724	+		MPMX19_02515	0.16	+0.3
2,632,724	+		MPMX19_02515	0.16	-0.8
2,632,725	-		MPMX19_02515	0.16	+0.6
2,632,725	-		MPMX19_02515	0.16	+0.1
2,632,725	-		MPMX19_02515	0.16	-1.4
2,632,725	-		MPMX19_02515	0.16	-0.1
2,632,725	-		MPMX19_02515	0.16	-2.0
2,632,725	-		MPMX19_02515	0.16	+0.2
2,632,725	-		MPMX19_02515	0.16	+0.1
2,632,725	-		MPMX19_02515	0.16	+0.9
2,632,970	+		MPMX19_02515	0.32	-2.5
2,632,970	+		MPMX19_02515	0.32	-0.5
2,632,970	+		MPMX19_02515	0.32	+0.8
2,632,970	+		MPMX19_02515	0.32	-0.6
2,632,971	-		MPMX19_02515	0.32	-1.6
2,632,971	-		MPMX19_02515	0.32	-0.8
2,633,024	+		MPMX19_02515	0.35	-1.2
2,633,024	+		MPMX19_02515	0.35	-0.6
2,633,024	+		MPMX19_02515	0.35	+2.1
2,633,024	+		MPMX19_02515	0.35	-0.0
2,633,024	+		MPMX19_02515	0.35	+1.2
2,633,024	+		MPMX19_02515	0.35	+0.1
2,633,024	+		MPMX19_02515	0.35	-0.2
2,633,024	+		MPMX19_02515	0.35	-0.2
2,633,024	+		MPMX19_02515	0.35	+0.3
2,633,024	+		MPMX19_02515	0.35	+0.3
2,633,024	+		MPMX19_02515	0.35	-1.7
2,633,024	+		MPMX19_02515	0.35	-0.0
2,633,024	+		MPMX19_02515	0.35	+0.8
2,633,024	+		MPMX19_02515	0.35	+1.5
2,633,024	+		MPMX19_02515	0.35	-0.6
2,633,024	+		MPMX19_02515	0.35	+1.4
2,633,024	+		MPMX19_02515	0.35	+1.4
2,633,024	+		MPMX19_02515	0.35	+1.0
2,633,024	+		MPMX19_02515	0.35	-0.0
2,633,024	+		MPMX19_02515	0.35	+0.5
2,633,024	+		MPMX19_02515	0.35	-0.1
2,633,025	-		MPMX19_02515	0.35	-1.9
2,633,025	-		MPMX19_02515	0.35	+0.6
2,633,025	-		MPMX19_02515	0.35	-1.1
2,633,025	-		MPMX19_02515	0.35	+0.4
2,633,025	-		MPMX19_02515	0.35	-0.2
2,633,025	-		MPMX19_02515	0.35	+0.9
2,633,025	-		MPMX19_02515	0.35	+0.7
2,633,025	-		MPMX19_02515	0.35	-1.6
2,633,025	-		MPMX19_02515	0.35	-0.3
2,633,025	-		MPMX19_02515	0.35	-1.0
2,633,025	-		MPMX19_02515	0.35	-0.7
2,633,025	-		MPMX19_02515	0.35	+1.2
2,633,025	-		MPMX19_02515	0.35	-0.5
2,633,025	-		MPMX19_02515	0.35	+1.0
2,633,025	-		MPMX19_02515	0.35	-0.6
2,633,025	-		MPMX19_02515	0.35	-0.7
2,633,025	-		MPMX19_02515	0.35	-1.5
2,633,025	-		MPMX19_02515	0.35	-0.9
2,633,025	-		MPMX19_02515	0.35	-1.6
2,633,025	-		MPMX19_02515	0.35	+0.9
2,633,025	-		MPMX19_02515	0.35	-0.9
2,633,025	-		MPMX19_02515	0.35	-0.8
2,633,025	-		MPMX19_02515	0.35	-1.3
2,633,025	-		MPMX19_02515	0.35	-1.6
2,633,483	+		MPMX19_02515	0.63	-0.6
2,633,483	+		MPMX19_02515	0.63	+0.9
2,633,483	+		MPMX19_02515	0.63	+0.5
2,633,484	-		MPMX19_02515	0.63	-0.7
2,633,484	-		MPMX19_02515	0.63	-1.5
2,633,484	-		MPMX19_02515	0.63	-1.1
2,633,484	-		MPMX19_02515	0.63	+0.1
2,633,484	-		MPMX19_02515	0.63	-1.7
2,633,534	+		MPMX19_02515	0.67	-0.9
2,633,535	-		MPMX19_02515	0.67	-1.3
2,633,567	+		MPMX19_02515	0.69	+0.3
2,633,567	+		MPMX19_02515	0.69	-0.0
2,633,567	+		MPMX19_02515	0.69	-1.7
2,633,567	+		MPMX19_02515	0.69	+0.3
2,633,567	+		MPMX19_02515	0.69	-3.3
2,633,567	+		MPMX19_02515	0.69	-1.0
2,633,567	+		MPMX19_02515	0.69	+1.9
2,633,567	+		MPMX19_02515	0.69	-2.1
2,633,567	+		MPMX19_02515	0.69	-0.8
2,633,567	+		MPMX19_02515	0.69	+0.6
2,633,567	+		MPMX19_02515	0.69	+1.0
2,633,567	+		MPMX19_02515	0.69	-1.2
2,633,567	+		MPMX19_02515	0.69	-2.0
2,633,567	+		MPMX19_02515	0.69	+0.1
2,633,567	+		MPMX19_02515	0.69	+0.6
2,633,567	+		MPMX19_02515	0.69	+0.5
2,633,567	+		MPMX19_02515	0.69	-0.5
2,633,567	+		MPMX19_02515	0.69	+1.4
2,633,567	+		MPMX19_02515	0.69	-1.6
2,633,567	+		MPMX19_02515	0.69	-0.1
2,633,567	+		MPMX19_02515	0.69	+0.9
2,633,567	+		MPMX19_02515	0.69	-0.0
2,633,567	+		MPMX19_02515	0.69	-0.9
2,633,567	+		MPMX19_02515	0.69	-0.4
2,633,567	+		MPMX19_02515	0.69	+1.7
2,633,567	+		MPMX19_02515	0.69	-0.7
2,633,567	+		MPMX19_02515	0.69	-1.5
2,633,567	+		MPMX19_02515	0.69	-0.1
2,633,567	+		MPMX19_02515	0.69	-1.6
2,633,567	+		MPMX19_02515	0.69	-1.5
2,633,567	+		MPMX19_02515	0.69	-0.7
2,633,567	+		MPMX19_02515	0.69	+0.1
2,633,567	+		MPMX19_02515	0.69	+0.5
2,633,567	+		MPMX19_02515	0.69	-0.1
2,633,567	+		MPMX19_02515	0.69	-1.2
2,633,567	+		MPMX19_02515	0.69	+0.8
2,633,567	+		MPMX19_02515	0.69	-0.9
2,633,567	+		MPMX19_02515	0.69	-1.6
2,633,567	+		MPMX19_02515	0.69	+0.6
2,633,567	+		MPMX19_02515	0.69	-0.5
2,633,568	-		MPMX19_02515	0.69	-2.4
2,633,568	-		MPMX19_02515	0.69	+0.1
2,633,568	-		MPMX19_02515	0.69	-0.2
2,633,568	-		MPMX19_02515	0.69	+0.7
2,633,568	-		MPMX19_02515	0.69	-1.1
2,633,568	-		MPMX19_02515	0.69	-0.5
2,633,568	-		MPMX19_02515	0.69	-0.5
2,633,568	-		MPMX19_02515	0.69	-1.6
2,633,568	-		MPMX19_02515	0.69	-0.2
2,633,568	-		MPMX19_02515	0.69	+0.1
2,633,568	-		MPMX19_02515	0.69	-2.1
2,633,568	-		MPMX19_02515	0.69	-0.0
2,633,568	-		MPMX19_02515	0.69	-0.9
2,633,568	-		MPMX19_02515	0.69	-0.7
2,633,568	-		MPMX19_02515	0.69	-1.1
2,633,568	-		MPMX19_02515	0.69	-0.5
2,633,568	-		MPMX19_02515	0.69	-1.4
2,633,568	-		MPMX19_02515	0.69	-1.7
2,633,568	-		MPMX19_02515	0.69	+1.1
2,633,568	-		MPMX19_02515	0.69	-0.5
2,633,568	-		MPMX19_02515	0.69	-0.7
2,633,569	+		MPMX19_02515	0.69	+1.0
2,633,569	+		MPMX19_02515	0.69	+0.3
2,633,569	+		MPMX19_02515	0.69	+0.3
2,633,569	+		MPMX19_02515	0.69	+0.4
2,633,569	+		MPMX19_02515	0.69	+0.5
2,633,569	+		MPMX19_02515	0.69	-0.7
2,633,569	+		MPMX19_02515	0.69	+0.2
2,633,569	+		MPMX19_02515	0.69	-1.4
2,633,569	+		MPMX19_02515	0.69	+0.1
2,633,569	+		MPMX19_02515	0.69	+0.3
2,633,569	+		MPMX19_02515	0.69	+0.9
2,633,569	+		MPMX19_02515	0.69	+0.9
2,633,569	+		MPMX19_02515	0.69	-1.7
2,633,569	+		MPMX19_02515	0.69	+1.5
2,633,569	+		MPMX19_02515	0.69	+1.2
2,633,569	+		MPMX19_02515	0.69	-1.5
2,633,569	+		MPMX19_02515	0.69	+0.5
2,633,569	+		MPMX19_02515	0.69	-0.1
2,633,570	-		MPMX19_02515	0.69	-0.1
2,633,570	-		MPMX19_02515	0.69	+1.9
2,633,570	-		MPMX19_02515	0.69	-0.8
2,633,570	-		MPMX19_02515	0.69	-0.7
2,633,570	-		MPMX19_02515	0.69	+0.1
2,633,570	-		MPMX19_02515	0.69	-1.1
2,633,570	-		MPMX19_02515	0.69	+0.3
2,633,570	-		MPMX19_02515	0.69	-1.8
2,633,570	-		MPMX19_02515	0.69	-0.5
2,633,570	-		MPMX19_02515	0.69	+0.9
2,633,570	-		MPMX19_02515	0.69	-1.8
2,633,570	-		MPMX19_02515	0.69	-1.7
2,633,570	-		MPMX19_02515	0.69	-0.1
2,633,570	-		MPMX19_02515	0.69	-1.5
2,633,570	-		MPMX19_02515	0.69	-1.0
2,633,570	-		MPMX19_02515	0.69	-0.9
2,633,570	-		MPMX19_02515	0.69	-1.6
2,633,570	-		MPMX19_02515	0.69	-1.3
2,633,570	-		MPMX19_02515	0.69	-0.0
2,633,705	+		MPMX19_02515	0.77	-0.6
2,633,705	+		MPMX19_02515	0.77	+0.5
2,633,705	+		MPMX19_02515	0.77	+1.6
2,633,705	+		MPMX19_02515	0.77	-1.1
2,633,706	-		MPMX19_02515	0.77	-0.5
2,633,706	-		MPMX19_02515	0.77	-0.9
2,633,786	+		MPMX19_02515	0.82	-1.3
2,633,787	-		MPMX19_02515	0.82	+0.5
2,633,787	-		MPMX19_02515	0.82	+0.3
2,633,787	-		MPMX19_02515	0.82	-0.4
2,633,862	+		MPMX19_02515	0.87	-0.9
2,633,862	+		MPMX19_02515	0.87	+0.1
2,633,862	+		MPMX19_02515	0.87	-0.4
2,633,863	-		MPMX19_02515	0.87	+0.2
2,633,863	-		MPMX19_02515	0.87	-1.6
2,633,875	+		MPMX19_02515	0.88	+1.0
2,633,876	-		MPMX19_02515	0.88	+0.5
2,633,903	+		MPMX19_02515	0.89	-0.3
2,633,904	-		MPMX19_02515	0.89	+0.1
2,633,904	-		MPMX19_02515	0.89	+0.5
2,633,953	+				-1.7
2,633,990	+				+1.5
2,634,021	+				-1.5
2,634,021	+				+0.2
2,634,030	+				-1.5
2,634,030	+				-0.8
2,634,030	+				-0.1
2,634,030	+				-0.2
2,634,030	+				-2.8
2,634,030	+				+0.7
2,634,030	+				-0.0
2,634,031	-				-1.0
2,634,031	-				-1.0
2,634,031	-				-0.7
2,634,031	-				+0.3
2,634,031	-				-0.6
2,634,063	-				+0.5
2,634,082	+				-0.5
2,634,082	+				+0.6
2,634,082	+				-0.5
2,634,082	+				+0.1
2,634,082	+				-1.3
2,634,082	+				+0.1
2,634,082	+				+0.3
2,634,082	+				-1.8
2,634,082	+				+0.3
2,634,082	+				-0.8
2,634,082	+				+0.6
2,634,083	-				-0.1
2,634,083	-				-0.3
2,634,083	-				+0.5
2,634,083	-				-0.7
2,634,083	-				+0.2
2,634,091	+				-1.5
2,634,091	+				-0.4
2,634,091	+				-0.9
2,634,091	+				-1.5
2,634,091	+				-0.9
2,634,091	+				+0.5
2,634,091	+				+0.8
2,634,091	+				-0.6
2,634,091	+				-0.5
2,634,091	+				-0.3
2,634,091	+				+0.6
2,634,091	+				-0.4
2,634,091	+				-1.2
2,634,091	+				+0.1
2,634,091	+				-1.3
2,634,091	+				-0.1
2,634,091	+				+0.3
2,634,091	+				-0.0
2,634,091	+				-0.9
2,634,091	+				-0.6
2,634,091	+				+0.2
2,634,091	+				-1.2
2,634,091	+				-0.4
2,634,091	+				-0.7
2,634,092	-				-2.1
2,634,092	-				-1.3
2,634,092	-				-0.5
2,634,092	-				+0.9
2,634,092	-				-0.1
2,634,092	-				-0.5
2,634,092	-				-0.7
2,634,092	-				+0.3
2,634,092	-				-1.1
2,634,092	-				-0.5
2,634,092	-				-0.3
2,634,092	-				-0.5
2,634,092	-				-1.0
2,634,092	-				+0.4
2,634,092	-				-0.3
2,634,092	-				+2.1
2,634,153	+				-0.8
2,634,153	+				-2.5
2,634,153	+				-2.1
2,634,161	+				-1.3
2,634,161	+				+0.0
2,634,161	+				-0.1
2,634,161	+				-2.0
2,634,161	+				-0.9
2,634,161	+				-1.2
2,634,162	-				-0.7
2,634,168	+				+0.5
2,634,168	+				-1.7
2,634,172	+				+0.3
2,634,173	-				+1.1
2,634,197	-				-0.1
2,634,387	+		MPMX19_02516	0.37	+0.3
2,634,388	-		MPMX19_02516	0.37	-0.5
2,634,388	-		MPMX19_02516	0.37	-1.5
2,634,388	-		MPMX19_02516	0.37	+1.6
2,634,388	-		MPMX19_02516	0.37	-0.5
2,634,388	-		MPMX19_02516	0.37	-1.8
2,634,388	-		MPMX19_02516	0.37	-1.5
2,634,388	-		MPMX19_02516	0.37	-0.3
2,634,555	+		MPMX19_02516	0.71	+0.2
2,634,555	+		MPMX19_02516	0.71	-1.7
2,634,555	+		MPMX19_02516	0.71	+1.9
2,634,555	+		MPMX19_02516	0.71	-1.6
2,634,555	+		MPMX19_02516	0.71	-1.1
2,634,555	+		MPMX19_02516	0.71	-0.9
2,634,555	+		MPMX19_02516	0.71	-1.5
2,634,555	+		MPMX19_02516	0.71	+0.9
2,634,555	+		MPMX19_02516	0.71	-1.5
2,634,555	+		MPMX19_02516	0.71	-0.5
2,634,555	+		MPMX19_02516	0.71	-1.3
2,634,556	-		MPMX19_02516	0.71	-1.9
2,634,556	-		MPMX19_02516	0.71	-0.1
2,634,556	-		MPMX19_02516	0.71	-1.1
2,634,556	-		MPMX19_02516	0.71	-1.1
2,634,556	-		MPMX19_02516	0.71	+1.1
2,634,556	-		MPMX19_02516	0.71	+0.9
2,634,556	-		MPMX19_02516	0.71	+0.6
2,634,606	+		MPMX19_02516	0.81	-0.0
2,634,609	+		MPMX19_02516	0.82	-1.8
2,634,609	+		MPMX19_02516	0.82	-0.9
2,634,609	+		MPMX19_02516	0.82	+0.7
2,634,610	-		MPMX19_02516	0.82	-1.1
2,634,696	+				-1.5
2,634,697	-				-1.7
2,634,697	-				+0.4
2,634,697	-				-1.0
2,634,697	-				+0.5
2,634,697	-				+0.5
2,634,697	-				-1.1
2,634,697	-				-0.5
2,634,818	+				-0.7
2,634,818	+				+0.6
2,634,819	-				-1.1
2,634,819	-				-1.0
2,634,852	-				-0.5
2,634,883	+				+0.9
2,634,883	+				-0.2
2,634,883	+				-0.2
2,634,883	+				+0.1
2,634,883	+				-0.3
2,634,883	+				+0.9
2,634,883	+				-1.8
2,634,883	+				-0.7
2,634,883	+				+0.5
2,634,883	+				-0.3
2,634,883	+				-0.3
2,634,883	+				-1.5
2,634,883	+				-1.1
2,634,883	+				-0.6
2,634,883	+				+0.6
2,634,883	+				+2.3
2,634,883	+				-0.7
2,634,883	+				-1.6
2,634,883	+				-1.1
2,634,883	+				+1.0
2,634,883	+				+1.3
2,634,883	+				-0.3
2,634,883	+				-0.5
2,634,884	-				+1.0
2,634,884	-				-0.1
2,634,884	-				+1.5
2,634,884	-				-1.5
2,634,884	-				-0.4
2,634,884	-				-0.5
2,634,884	-				-0.1
2,634,884	-				-1.6
2,634,884	-				-1.8
2,634,884	-				-1.6
2,634,884	-				+0.3
2,634,884	-				+0.8
2,634,884	-				+0.4
2,634,884	-				-0.7
2,634,884	-				-0.1
2,634,884	-				+0.3
2,634,884	-				-0.5
2,634,884	-				-2.7
2,634,884	-				-0.8
2,634,884	-				-1.9
2,634,884	-				-0.1
2,634,906	+				+0.4
2,634,906	+				-0.6