Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02389

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,512,136	+		MPMX19_02387	0.82	-0.6
2,512,136	+		MPMX19_02387	0.82	-1.3
2,512,136	+		MPMX19_02387	0.82	+0.5
2,512,136	+		MPMX19_02387	0.82	+0.5
2,512,136	+		MPMX19_02387	0.82	-1.2
2,512,136	+		MPMX19_02387	0.82	+1.5
2,512,136	+		MPMX19_02387	0.82	-1.2
2,512,136	+		MPMX19_02387	0.82	-0.5
2,512,136	+		MPMX19_02387	0.82	+1.8
2,512,136	+		MPMX19_02387	0.82	+0.1
2,512,136	+		MPMX19_02387	0.82	-0.9
2,512,137	-		MPMX19_02387	0.82	-0.2
2,512,137	-		MPMX19_02387	0.82	+1.1
2,512,137	-		MPMX19_02387	0.82	-0.7
2,512,137	-		MPMX19_02387	0.82	-1.9
2,512,142	+		MPMX19_02387	0.83	-1.1
2,512,142	+		MPMX19_02387	0.83	+0.3
2,512,142	+		MPMX19_02387	0.83	+0.3
2,512,142	+		MPMX19_02387	0.83	-1.5
2,512,142	+		MPMX19_02387	0.83	-2.0
2,512,142	+		MPMX19_02387	0.83	+0.3
2,512,143	-		MPMX19_02387	0.83	-1.3
2,512,143	-		MPMX19_02387	0.83	-0.7
2,512,143	-		MPMX19_02387	0.83	-0.3
2,512,143	-		MPMX19_02387	0.83	-2.7
2,512,143	-		MPMX19_02387	0.83	+0.4
2,512,143	-		MPMX19_02387	0.83	-0.2
2,512,143	-		MPMX19_02387	0.83	+0.1
2,512,143	-		MPMX19_02387	0.83	-1.3
2,512,143	-		MPMX19_02387	0.83	-0.6
2,512,143	-		MPMX19_02387	0.83	+0.1
2,512,247	+				-0.2
2,512,247	+				-1.4
2,512,247	+				+0.8
2,512,247	+				-1.3
2,512,247	+				-0.2
2,512,247	+				+0.7
2,512,247	+				-1.2
2,512,247	+				+0.1
2,512,248	-				-0.7
2,512,248	-				+1.3
2,512,248	-				-0.6
2,512,248	-				+0.3
2,512,248	-				-0.4
2,512,248	-				+0.1
2,512,248	-				-0.2
2,512,248	-				+1.7
2,512,248	-				+1.5
2,512,248	-				-2.1
2,512,248	-				+0.7
2,512,248	-				+0.5
2,512,248	-				-0.4
2,512,248	-				+1.3
2,512,248	-				-0.6
2,512,304	+				-1.3
2,512,304	+				+0.2
2,512,304	+				-0.4
2,512,305	-				-1.3
2,512,305	-				+0.3
2,512,487	+		MPMX19_02388	0.43	-1.0
2,512,487	+		MPMX19_02388	0.43	-2.2
2,512,487	+		MPMX19_02388	0.43	-2.6
2,512,487	+		MPMX19_02388	0.43	+0.8
2,512,488	-		MPMX19_02388	0.43	+1.0
2,512,488	-		MPMX19_02388	0.43	+0.5
2,512,553	+		MPMX19_02388	0.58	-0.0
2,512,553	+		MPMX19_02388	0.58	+0.1
2,512,553	+		MPMX19_02388	0.58	-1.3
2,512,554	-		MPMX19_02388	0.59	+0.7
2,512,554	-		MPMX19_02388	0.59	-0.6
2,512,554	-		MPMX19_02388	0.59	+0.5
2,512,554	-		MPMX19_02388	0.59	+0.7
2,512,554	-		MPMX19_02388	0.59	-0.2
2,512,554	-		MPMX19_02388	0.59	+0.3
2,512,582	+		MPMX19_02388	0.65	-0.9
2,512,583	-		MPMX19_02388	0.65	+0.1
2,512,583	-		MPMX19_02388	0.65	+1.5
2,512,583	-		MPMX19_02388	0.65	-0.7
2,512,810	+				+0.7
2,512,811	-				-0.7
2,512,811	-				-0.0
2,512,811	-				-2.1
2,512,820	+				+0.0
2,512,821	-				-0.6
2,512,821	-				+1.8
2,512,841	+				-1.0
2,512,842	-				-0.7
2,512,907	+				-1.0
2,512,907	+				-1.5
2,512,907	+				+0.1
2,512,907	+				+0.1
2,512,907	+				+0.8
2,512,908	-				+0.5
2,512,908	-				-1.1
2,512,908	-				-0.4
2,512,908	-				+0.2
2,512,908	-				-1.1
2,512,908	-				-2.4
2,513,197	+		MPMX19_02389	0.36	-1.0
2,513,244	+		MPMX19_02389	0.42	+0.3
2,513,245	-		MPMX19_02389	0.42	+0.6
2,513,369	+		MPMX19_02389	0.59	-0.4
2,513,369	+		MPMX19_02389	0.59	-0.9
2,513,369	+		MPMX19_02389	0.59	-2.2
2,513,369	+		MPMX19_02389	0.59	-1.3
2,513,370	-		MPMX19_02389	0.59	+0.5
2,513,370	-		MPMX19_02389	0.59	-0.3
2,513,370	-		MPMX19_02389	0.59	-0.2
2,513,370	-		MPMX19_02389	0.59	-0.7
2,513,370	-		MPMX19_02389	0.59	+0.2
2,513,370	-		MPMX19_02389	0.59	-0.0
2,513,396	+		MPMX19_02389	0.62	+0.1
2,513,396	+		MPMX19_02389	0.62	+0.3
2,513,397	-		MPMX19_02389	0.62	-1.0
2,513,397	-		MPMX19_02389	0.62	-1.7
2,513,591	+		MPMX19_02389	0.88	-0.3
2,513,591	+		MPMX19_02389	0.88	+0.3
2,513,591	+		MPMX19_02389	0.88	+0.3
2,513,591	+		MPMX19_02389	0.88	+0.3
2,513,591	+		MPMX19_02389	0.88	+0.4
2,513,591	+		MPMX19_02389	0.88	-2.0
2,513,591	+		MPMX19_02389	0.88	-0.7
2,513,591	+		MPMX19_02389	0.88	-0.2
2,513,591	+		MPMX19_02389	0.88	-0.7
2,513,591	+		MPMX19_02389	0.88	-0.7
2,513,591	+		MPMX19_02389	0.88	+0.5
2,513,591	+		MPMX19_02389	0.88	-0.0
2,513,592	-		MPMX19_02389	0.88	-1.7
2,513,592	-		MPMX19_02389	0.88	+1.2
2,513,592	-		MPMX19_02389	0.88	+0.5
2,513,592	-		MPMX19_02389	0.88	+0.7
2,513,592	-		MPMX19_02389	0.88	-0.6
2,513,592	-		MPMX19_02389	0.88	+0.6
2,513,592	-		MPMX19_02389	0.88	-0.3
2,513,592	-		MPMX19_02389	0.88	+0.0
2,513,592	-		MPMX19_02389	0.88	-0.4
2,513,592	-		MPMX19_02389	0.88	+0.2
2,513,592	-		MPMX19_02389	0.88	+0.7
2,513,592	-		MPMX19_02389	0.88	-0.4
2,513,592	-		MPMX19_02389	0.88	+0.4
2,513,611	+				+0.3
2,513,611	+				-0.2
2,513,611	+				-1.0
2,513,611	+				-0.3
2,513,611	+				+0.5
2,513,611	+				-0.1
2,513,611	+				+0.3
2,513,611	+				+1.1
2,513,611	+				-0.7
2,513,611	+				-2.5
2,513,612	-				-0.4
2,513,612	-				-1.2
2,513,612	-				-0.9
2,513,612	-				+0.3
2,513,612	-				+0.2
2,513,612	-				-0.6
2,513,612	-				+0.4
2,513,681	+				+1.5
2,513,681	+				+0.3
2,513,682	-				-1.6
2,513,682	-				-2.5
2,513,682	-				+1.1
2,513,710	+				+0.2
2,513,710	+				+0.2
2,513,711	-				+0.0
2,514,027	+				-1.2
2,514,027	+				+0.5
2,514,027	+				-0.8
2,514,027	+				+1.6
2,514,028	-				-0.3
2,514,028	-				-0.8
2,514,028	-				-2.4
2,514,028	-				-2.8
2,514,045	+				-0.3
2,514,045	+				+1.4
2,514,045	+				-1.3
2,514,045	+				+0.5
2,514,045	+				-1.4
2,514,045	+				-0.7
2,514,045	+				-0.9
2,514,045	+				-0.2
2,514,045	+				-0.1
2,514,046	-				+0.3
2,514,046	-				-0.4
2,514,046	-				-1.3
2,514,046	-				+1.3
2,514,046	-				-0.7
2,514,046	-				-0.2
2,514,053	+				-0.7
2,514,053	+				-1.7
2,514,053	+				-0.5
2,514,240	-				-0.2
2,514,259	+				+0.3
2,514,259	+				-2.2
2,514,259	+				-0.2
2,514,260	-				-1.7
2,514,260	-				+0.2
2,514,260	-				-0.3
2,514,260	-				+0.5
2,514,260	-				+0.1
2,514,260	-				-0.2
2,514,427	+		MPMX19_02391	0.27	-0.9
2,514,427	+		MPMX19_02391	0.27	+1.4
2,514,427	+		MPMX19_02391	0.27	-0.5
2,514,428	-		MPMX19_02391	0.27	+0.5
2,514,428	-		MPMX19_02391	0.27	-0.1
2,514,428	-		MPMX19_02391	0.27	-0.5
2,514,428	-		MPMX19_02391	0.27	-0.7
2,514,526	+		MPMX19_02391	0.45	-0.3
2,514,526	+		MPMX19_02391	0.45	+0.4
2,514,526	+		MPMX19_02391	0.45	-2.3
2,514,526	+		MPMX19_02391	0.45	-1.1
2,514,527	-		MPMX19_02391	0.45	-0.0
2,514,527	-		MPMX19_02391	0.45	-1.2
2,514,532	+		MPMX19_02391	0.46	+0.1
2,514,532	+		MPMX19_02391	0.46	-1.3
2,514,532	+		MPMX19_02391	0.46	-1.3
2,514,532	+		MPMX19_02391	0.46	-1.3
2,514,532	+		MPMX19_02391	0.46	+0.1
2,514,532	+		MPMX19_02391	0.46	+0.4
2,514,532	+		MPMX19_02391	0.46	-0.3
2,514,532	+		MPMX19_02391	0.46	-0.5
2,514,532	+		MPMX19_02391	0.46	-0.7
2,514,532	+		MPMX19_02391	0.46	+1.4
2,514,532	+		MPMX19_02391	0.46	-1.6
2,514,532	+		MPMX19_02391	0.46	-1.1
2,514,532	+		MPMX19_02391	0.46	+0.3
2,514,532	+		MPMX19_02391	0.46	+1.0
2,514,532	+		MPMX19_02391	0.46	-0.6
2,514,532	+		MPMX19_02391	0.46	-0.5
2,514,532	+		MPMX19_02391	0.46	+0.2
2,514,533	-		MPMX19_02391	0.46	-0.3
2,514,533	-		MPMX19_02391	0.46	+0.6
2,514,533	-		MPMX19_02391	0.46	-0.5
2,514,533	-		MPMX19_02391	0.46	-2.0
2,514,533	-		MPMX19_02391	0.46	-0.5
2,514,533	-		MPMX19_02391	0.46	-1.2
2,514,533	-		MPMX19_02391	0.46	+0.3
2,514,533	-		MPMX19_02391	0.46	-0.5
2,514,533	-		MPMX19_02391	0.46	-0.7
2,514,533	-		MPMX19_02391	0.46	-1.0
2,514,533	-		MPMX19_02391	0.46	-0.3
2,514,533	-		MPMX19_02391	0.46	-1.0
2,514,533	-		MPMX19_02391	0.46	+0.3
2,514,533	-		MPMX19_02391	0.46	+1.0
2,514,533	-		MPMX19_02391	0.46	+0.4
2,514,533	-		MPMX19_02391	0.46	-1.3
2,514,533	-		MPMX19_02391	0.46	-2.1
2,514,533	-		MPMX19_02391	0.46	+0.3
2,514,533	-		MPMX19_02391	0.46	+0.0