Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02181

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,280,868	+				-1.7
2,280,869	-				-0.8
2,280,869	-				+1.0
2,280,906	+				+2.2
2,280,906	+				+2.3
2,280,971	+				+1.2
2,280,971	+				+0.2
2,280,972	-				-0.6
2,281,169	-		MPMX19_02180	0.26	-1.0
2,281,348	+		MPMX19_02180	0.56	-1.7
2,281,348	+		MPMX19_02180	0.56	-0.3
2,281,348	+		MPMX19_02180	0.56	-0.3
2,281,348	+		MPMX19_02180	0.56	+0.5
2,281,348	+		MPMX19_02180	0.56	+0.2
2,281,349	-		MPMX19_02180	0.56	-1.7
2,281,349	-		MPMX19_02180	0.56	-0.7
2,281,375	+		MPMX19_02180	0.61	-1.3
2,281,376	-		MPMX19_02180	0.61	+0.3
2,281,376	-		MPMX19_02180	0.61	+0.2
2,281,696	+				-1.5
2,281,696	+				-2.4
2,281,696	+				-0.1
2,281,696	+				+0.5
2,281,696	+				-1.5
2,281,696	+				+0.0
2,281,696	+				-1.2
2,281,696	+				+1.8
2,281,696	+				-1.4
2,281,696	+				-0.8
2,281,696	+				-0.5
2,281,696	+				-0.1
2,281,696	+				-0.8
2,281,696	+				-0.7
2,281,696	+				+1.8
2,281,696	+				-0.3
2,281,696	+				+0.4
2,281,696	+				+0.2
2,281,696	+				+0.8
2,281,697	-				+1.8
2,281,697	-				-1.9
2,281,697	-				+0.6
2,281,697	-				-0.7
2,281,697	-				-1.2
2,281,697	-				-1.8
2,281,697	-				-0.2
2,281,697	-				+0.3
2,281,697	-				-1.9
2,281,697	-				-1.0
2,281,697	-				-0.9
2,281,697	-				-1.9
2,281,697	-				-1.3
2,281,697	-				+0.1
2,281,697	-				-1.8
2,281,697	-				-1.1
2,281,697	-				-0.2
2,281,697	-				-1.9
2,281,697	-				-0.9
2,281,697	-				-0.4
2,281,823	+		MPMX19_02181	0.57	-0.0
2,281,823	+		MPMX19_02181	0.57	-0.5
2,281,823	+		MPMX19_02181	0.57	-1.4
2,281,823	+		MPMX19_02181	0.57	-1.0
2,281,823	+		MPMX19_02181	0.57	+0.1
2,281,823	+		MPMX19_02181	0.57	+0.4
2,281,824	-		MPMX19_02181	0.57	-2.0
2,281,824	-		MPMX19_02181	0.57	-2.1
2,281,824	-		MPMX19_02181	0.57	-1.2
2,281,824	-		MPMX19_02181	0.57	-1.4
2,281,824	-		MPMX19_02181	0.57	-0.9
2,281,920	+				-0.5
2,281,920	+				-0.1
2,281,921	-				-0.7
2,281,930	+				+0.4
2,281,930	+				+1.4
2,281,930	+				+0.8
2,282,039	+				+0.1
2,282,040	-				+1.8
2,282,093	+				+0.0
2,282,093	+				-0.3
2,282,093	+				-1.4
2,282,093	+				+0.7
2,282,093	+				+0.3
2,282,094	-				-2.2
2,282,094	-				+1.9
2,282,094	-				-2.4
2,282,094	-				+0.2
2,282,204	+				-0.5
2,282,204	+				-0.7
2,282,204	+				-0.9
2,282,205	-				+0.5
2,282,205	-				+0.6
2,282,205	-				+0.8
2,282,205	-				+0.0
2,282,205	-				-1.0
2,282,417	+		MPMX19_02182	0.20	-2.2
2,282,417	+		MPMX19_02182	0.20	+0.3
2,282,417	+		MPMX19_02182	0.20	+0.5
2,282,417	+		MPMX19_02182	0.20	+0.2
2,282,417	+		MPMX19_02182	0.20	-0.1
2,282,417	+		MPMX19_02182	0.20	-0.5
2,282,417	+		MPMX19_02182	0.20	+0.5
2,282,417	+		MPMX19_02182	0.20	-0.7
2,282,417	+		MPMX19_02182	0.20	-0.4
2,282,417	+		MPMX19_02182	0.20	-1.2
2,282,417	+		MPMX19_02182	0.20	+0.1
2,282,417	+		MPMX19_02182	0.20	+0.7
2,282,417	+		MPMX19_02182	0.20	-0.3
2,282,418	-		MPMX19_02182	0.20	-1.5
2,282,418	-		MPMX19_02182	0.20	-1.0
2,282,418	-		MPMX19_02182	0.20	+1.1
2,282,418	-		MPMX19_02182	0.20	-0.8
2,282,418	-		MPMX19_02182	0.20	-0.7
2,282,418	-		MPMX19_02182	0.20	-1.7
2,282,418	-		MPMX19_02182	0.20	-1.3
2,282,418	-		MPMX19_02182	0.20	+1.2
2,282,418	-		MPMX19_02182	0.20	+1.5
2,282,418	-		MPMX19_02182	0.20	+0.4
2,282,418	-		MPMX19_02182	0.20	+1.4
2,282,418	-		MPMX19_02182	0.20	+0.8
2,282,418	-		MPMX19_02182	0.20	+0.6
2,282,418	-		MPMX19_02182	0.20	+1.0
2,282,418	-		MPMX19_02182	0.20	-0.5
2,282,762	+		MPMX19_02182	0.38	-0.4
2,282,762	+		MPMX19_02182	0.38	-1.1
2,282,762	+		MPMX19_02182	0.38	+0.2
2,282,762	+		MPMX19_02182	0.38	-0.8
2,282,762	+		MPMX19_02182	0.38	-0.2
2,282,763	-		MPMX19_02182	0.38	-1.4
2,282,763	-		MPMX19_02182	0.38	-0.7
2,282,763	-		MPMX19_02182	0.38	-1.1
2,282,763	-		MPMX19_02182	0.38	+0.1
2,282,763	-		MPMX19_02182	0.38	-1.6
2,282,763	-		MPMX19_02182	0.38	+1.0
2,282,763	-		MPMX19_02182	0.38	-1.5
2,282,763	-		MPMX19_02182	0.38	+0.8
2,282,763	-		MPMX19_02182	0.38	+0.4
2,282,763	-		MPMX19_02182	0.38	-0.1
2,282,895	+		MPMX19_02182	0.45	+1.0
2,282,895	+		MPMX19_02182	0.45	-0.7
2,282,895	+		MPMX19_02182	0.45	+0.3
2,282,895	+		MPMX19_02182	0.45	-0.6
2,282,895	+		MPMX19_02182	0.45	+0.3
2,282,895	+		MPMX19_02182	0.45	-0.1
2,282,896	-		MPMX19_02182	0.45	+0.5
2,282,896	-		MPMX19_02182	0.45	-2.2
2,282,896	-		MPMX19_02182	0.45	-0.9
2,282,896	-		MPMX19_02182	0.45	-1.4
2,282,897	+		MPMX19_02182	0.45	+0.6
2,282,897	+		MPMX19_02182	0.45	-0.3
2,282,897	+		MPMX19_02182	0.45	-0.7
2,282,897	+		MPMX19_02182	0.45	-1.2
2,282,897	+		MPMX19_02182	0.45	+0.2
2,282,897	+		MPMX19_02182	0.45	-1.0
2,282,897	+		MPMX19_02182	0.45	+1.6
2,282,897	+		MPMX19_02182	0.45	-1.1
2,282,897	+		MPMX19_02182	0.45	+0.1
2,282,897	+		MPMX19_02182	0.45	+0.4
2,282,897	+		MPMX19_02182	0.45	+0.2
2,282,897	+		MPMX19_02182	0.45	-0.8
2,282,897	+		MPMX19_02182	0.45	+0.3
2,282,897	+		MPMX19_02182	0.45	+1.5
2,282,897	+		MPMX19_02182	0.45	+0.1
2,282,897	+		MPMX19_02182	0.45	-0.7
2,282,897	+		MPMX19_02182	0.45	+0.9
2,282,897	+		MPMX19_02182	0.45	-1.5
2,282,897	+		MPMX19_02182	0.45	-1.8
2,282,897	+		MPMX19_02182	0.45	-1.0
2,282,897	+		MPMX19_02182	0.45	+1.5
2,282,897	+		MPMX19_02182	0.45	+0.1
2,282,897	+		MPMX19_02182	0.45	-0.9
2,282,897	+		MPMX19_02182	0.45	-1.3
2,282,897	+		MPMX19_02182	0.45	-0.9
2,282,897	+		MPMX19_02182	0.45	-0.6
2,282,897	+		MPMX19_02182	0.45	-1.5
2,282,897	+		MPMX19_02182	0.45	-0.5
2,282,897	+		MPMX19_02182	0.45	+0.6
2,282,897	+		MPMX19_02182	0.45	+0.2
2,282,897	+		MPMX19_02182	0.45	-0.9
2,282,897	+		MPMX19_02182	0.45	+0.2
2,282,897	+		MPMX19_02182	0.45	+1.0
2,282,897	+		MPMX19_02182	0.45	-1.0
2,282,897	+		MPMX19_02182	0.45	+0.5
2,282,897	+		MPMX19_02182	0.45	-0.5
2,282,897	+		MPMX19_02182	0.45	+0.4
2,282,897	+		MPMX19_02182	0.45	-0.7
2,282,897	+		MPMX19_02182	0.45	+1.2
2,282,897	+		MPMX19_02182	0.45	-0.4
2,282,897	+		MPMX19_02182	0.45	-0.2
2,282,897	+		MPMX19_02182	0.45	-2.1
2,282,897	+		MPMX19_02182	0.45	+0.6
2,282,897	+		MPMX19_02182	0.45	-1.4
2,282,898	-		MPMX19_02182	0.45	-0.4
2,282,898	-		MPMX19_02182	0.45	+0.5
2,282,898	-		MPMX19_02182	0.45	+3.4
2,282,898	-		MPMX19_02182	0.45	-0.4
2,282,898	-		MPMX19_02182	0.45	-1.0
2,282,898	-		MPMX19_02182	0.45	+0.4
2,282,898	-		MPMX19_02182	0.45	+0.9
2,282,898	-		MPMX19_02182	0.45	-0.3
2,282,898	-		MPMX19_02182	0.45	-1.4
2,282,898	-		MPMX19_02182	0.45	-0.7
2,282,898	-		MPMX19_02182	0.45	-0.5
2,282,898	-		MPMX19_02182	0.45	-1.2
2,282,898	-		MPMX19_02182	0.45	-1.9
2,282,898	-		MPMX19_02182	0.45	+0.6
2,282,898	-		MPMX19_02182	0.45	-0.9
2,282,898	-		MPMX19_02182	0.45	-0.3
2,282,898	-		MPMX19_02182	0.45	-0.5
2,282,898	-		MPMX19_02182	0.45	-0.2
2,282,898	-		MPMX19_02182	0.45	+1.2
2,282,898	-		MPMX19_02182	0.45	+0.5
2,282,898	-		MPMX19_02182	0.45	+0.7
2,282,898	-		MPMX19_02182	0.45	+0.5
2,282,898	-		MPMX19_02182	0.45	-0.5
2,282,898	-		MPMX19_02182	0.45	+0.2
2,282,898	-		MPMX19_02182	0.45	+0.2
2,282,898	-		MPMX19_02182	0.45	-1.7
2,282,898	-		MPMX19_02182	0.45	-0.2
2,282,898	-		MPMX19_02182	0.45	-0.1
2,282,898	-		MPMX19_02182	0.45	+0.4
2,282,898	-		MPMX19_02182	0.45	-0.4
2,282,898	-		MPMX19_02182	0.45	-1.0
2,282,898	-		MPMX19_02182	0.45	+0.3
2,282,898	-		MPMX19_02182	0.45	-0.8
2,282,898	-		MPMX19_02182	0.45	+0.2
2,282,898	-		MPMX19_02182	0.45	-0.3
2,282,898	-		MPMX19_02182	0.45	+0.6
2,282,898	-		MPMX19_02182	0.45	-0.1
2,282,898	-		MPMX19_02182	0.45	+0.3