Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02027

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
2,120,208	+		MPMX19_02026	0.82	+0.3
2,120,208	+		MPMX19_02026	0.82	-1.3
2,120,208	+		MPMX19_02026	0.82	-0.8
2,120,208	+		MPMX19_02026	0.82	+0.3
2,120,208	+		MPMX19_02026	0.82	+0.9
2,120,208	+		MPMX19_02026	0.82	-2.0
2,120,209	-		MPMX19_02026	0.82	+0.1
2,120,209	-		MPMX19_02026	0.82	-0.0
2,120,271	+		MPMX19_02026	0.83	-0.1
2,120,271	+		MPMX19_02026	0.83	+0.1
2,120,276	+		MPMX19_02026	0.83	+0.1
2,120,276	+		MPMX19_02026	0.83	+0.7
2,120,276	+		MPMX19_02026	0.83	+1.3
2,120,277	-		MPMX19_02026	0.83	-2.3
2,120,277	-		MPMX19_02026	0.83	+0.7
2,120,277	-		MPMX19_02026	0.83	-0.1
2,120,277	-		MPMX19_02026	0.83	+0.5
2,120,277	-		MPMX19_02026	0.83	-0.7
2,120,277	-		MPMX19_02026	0.83	-1.0
2,120,277	-		MPMX19_02026	0.83	-1.5
2,120,318	+		MPMX19_02026	0.84	+1.0
2,120,319	-		MPMX19_02026	0.84	+0.3
2,120,319	-		MPMX19_02026	0.84	+0.0
2,120,330	+		MPMX19_02026	0.85	-1.1
2,120,330	+		MPMX19_02026	0.85	-0.4
2,120,330	+		MPMX19_02026	0.85	-2.0
2,120,330	+		MPMX19_02026	0.85	-1.5
2,120,330	+		MPMX19_02026	0.85	+0.9
2,120,330	+		MPMX19_02026	0.85	-0.4
2,120,330	+		MPMX19_02026	0.85	+0.4
2,120,330	+		MPMX19_02026	0.85	-0.1
2,120,330	+		MPMX19_02026	0.85	-0.0
2,120,330	+		MPMX19_02026	0.85	-0.6
2,120,330	+		MPMX19_02026	0.85	+0.0
2,120,330	+		MPMX19_02026	0.85	-0.5
2,120,331	-		MPMX19_02026	0.85	+0.3
2,120,331	-		MPMX19_02026	0.85	+0.5
2,120,331	-		MPMX19_02026	0.85	+1.3
2,120,331	-		MPMX19_02026	0.85	+0.3
2,120,331	-		MPMX19_02026	0.85	-0.5
2,120,331	-		MPMX19_02026	0.85	-1.0
2,120,331	-		MPMX19_02026	0.85	-0.3
2,120,331	-		MPMX19_02026	0.85	-1.3
2,120,333	+		MPMX19_02026	0.85	-1.2
2,120,333	+		MPMX19_02026	0.85	-1.3
2,120,333	+		MPMX19_02026	0.85	-1.2
2,120,333	+		MPMX19_02026	0.85	+0.5
2,120,333	+		MPMX19_02026	0.85	-0.7
2,120,333	+		MPMX19_02026	0.85	+0.5
2,120,333	+		MPMX19_02026	0.85	+0.2
2,120,334	-		MPMX19_02026	0.85	-0.7
2,120,334	-		MPMX19_02026	0.85	+0.1
2,120,334	-		MPMX19_02026	0.85	-1.3
2,120,334	-		MPMX19_02026	0.85	-0.2
2,120,334	-		MPMX19_02026	0.85	-0.9
2,120,334	-		MPMX19_02026	0.85	+0.1
2,120,334	-		MPMX19_02026	0.85	+0.7
2,120,334	-		MPMX19_02026	0.85	+1.4
2,120,651	+				-0.2
2,120,652	-				-0.7
2,120,760	+				+1.0
2,120,761	-				+0.2
2,120,761	-				+0.4
2,120,761	-				-0.3
2,120,798	+				-1.4
2,120,798	+				+0.2
2,120,798	+				-0.9
2,120,798	+				+1.2
2,120,798	+				+0.3
2,120,798	+				-0.5
2,120,798	+				+0.2
2,120,798	+				-0.4
2,120,798	+				+0.0
2,120,798	+				-0.2
2,120,798	+				+0.4
2,120,798	+				-1.7
2,120,798	+				-0.1
2,120,799	-				-0.0
2,120,799	-				-1.4
2,120,799	-				-1.4
2,120,799	-				-1.4
2,120,799	-				+0.1
2,120,799	-				+0.1
2,120,799	-				+0.2
2,120,799	-				+2.4
2,120,799	-				-0.4
2,120,975	+				-1.6
2,120,975	+				-1.5
2,120,976	-				+2.3
2,120,976	-				+0.9
2,120,976	-				-0.4
2,120,976	-				-0.1
2,120,976	-				-0.7
2,120,989	+				+0.5
2,120,989	+				+0.4
2,120,989	+				-0.1
2,120,989	+				-0.6
2,120,990	-				-0.5
2,121,079	+				+0.1
2,121,080	-				-1.6
2,121,108	+				-0.1
2,121,108	+				+0.7
2,121,108	+				-1.2
2,121,108	+				+0.2
2,121,108	+				+0.7
2,121,108	+				-1.9
2,121,108	+				-0.4
2,121,109	-				+0.3
2,121,109	-				-0.5
2,121,109	-				+0.1
2,121,133	+				-1.1
2,121,133	+				-0.0
2,121,146	+				-0.2
2,121,146	+				-0.6
2,121,147	-				-1.9
2,121,147	-				-0.3
2,121,376	+		MPMX19_02027	0.12	+0.1
2,121,376	+		MPMX19_02027	0.12	+1.9
2,121,376	+		MPMX19_02027	0.12	+0.3
2,121,376	+		MPMX19_02027	0.12	-0.6
2,121,376	+		MPMX19_02027	0.12	+0.1
2,121,376	+		MPMX19_02027	0.12	-2.1
2,121,377	-		MPMX19_02027	0.13	-0.6
2,121,377	-		MPMX19_02027	0.13	-0.8
2,121,377	-		MPMX19_02027	0.13	-0.7
2,121,817	+		MPMX19_02027	0.45	-0.2
2,121,817	+		MPMX19_02027	0.45	-1.1
2,121,817	+		MPMX19_02027	0.45	+0.4
2,121,817	+		MPMX19_02027	0.45	+0.3
2,121,818	-		MPMX19_02027	0.45	+0.6
2,121,818	-		MPMX19_02027	0.45	-0.2
2,121,818	-		MPMX19_02027	0.45	-0.7
2,121,818	-		MPMX19_02027	0.45	-0.5
2,121,818	-		MPMX19_02027	0.45	-0.1
2,121,818	-		MPMX19_02027	0.45	+0.9
2,121,913	+		MPMX19_02027	0.52	-1.6
2,121,913	+		MPMX19_02027	0.52	+1.3
2,121,913	+		MPMX19_02027	0.52	+0.7
2,121,913	+		MPMX19_02027	0.52	+0.1
2,121,913	+		MPMX19_02027	0.52	-0.1
2,121,913	+		MPMX19_02027	0.52	+1.1
2,121,913	+		MPMX19_02027	0.52	-1.2
2,121,913	+		MPMX19_02027	0.52	-0.7
2,121,913	+		MPMX19_02027	0.52	+0.6
2,121,913	+		MPMX19_02027	0.52	+0.3
2,121,913	+		MPMX19_02027	0.52	+0.8
2,121,914	-		MPMX19_02027	0.52	-0.1
2,121,914	-		MPMX19_02027	0.52	-1.0
2,121,914	-		MPMX19_02027	0.52	+0.5
2,121,914	-		MPMX19_02027	0.52	+0.1
2,121,973	+		MPMX19_02027	0.56	+0.3
2,121,973	+		MPMX19_02027	0.56	-0.1
2,121,973	+		MPMX19_02027	0.56	+0.5
2,121,973	+		MPMX19_02027	0.56	-0.7
2,121,973	+		MPMX19_02027	0.56	-0.5
2,121,973	+		MPMX19_02027	0.56	+0.5
2,121,973	+		MPMX19_02027	0.56	+1.7
2,121,973	+		MPMX19_02027	0.56	+0.5
2,121,973	+		MPMX19_02027	0.56	-0.4
2,121,973	+		MPMX19_02027	0.56	-0.5
2,121,973	+		MPMX19_02027	0.56	-1.2
2,121,973	+		MPMX19_02027	0.56	-1.6
2,121,973	+		MPMX19_02027	0.56	+0.6
2,121,973	+		MPMX19_02027	0.56	-1.4
2,121,974	-		MPMX19_02027	0.56	+0.4
2,121,974	-		MPMX19_02027	0.56	+0.5
2,121,974	-		MPMX19_02027	0.56	+2.0
2,121,974	-		MPMX19_02027	0.56	-2.0
2,121,974	-		MPMX19_02027	0.56	+1.1
2,121,974	-		MPMX19_02027	0.56	-0.4
2,121,974	-		MPMX19_02027	0.56	-0.1
2,121,974	-		MPMX19_02027	0.56	+0.1
2,121,974	-		MPMX19_02027	0.56	-0.1
2,121,974	-		MPMX19_02027	0.56	+0.1
2,122,054	+		MPMX19_02027	0.62	+0.3
2,122,054	+		MPMX19_02027	0.62	-0.2
2,122,054	+		MPMX19_02027	0.62	-1.2
2,122,054	+		MPMX19_02027	0.62	+1.1
2,122,054	+		MPMX19_02027	0.62	+0.9
2,122,054	+		MPMX19_02027	0.62	-0.4
2,122,054	+		MPMX19_02027	0.62	+0.5
2,122,054	+		MPMX19_02027	0.62	-2.4
2,122,054	+		MPMX19_02027	0.62	-0.4
2,122,054	+		MPMX19_02027	0.62	-0.1
2,122,054	+		MPMX19_02027	0.62	-0.0
2,122,055	-		MPMX19_02027	0.62	-0.4
2,122,055	-		MPMX19_02027	0.62	-0.5
2,122,055	-		MPMX19_02027	0.62	-0.7
2,122,055	-		MPMX19_02027	0.62	+0.5
2,122,055	-		MPMX19_02027	0.62	+0.5
2,122,055	-		MPMX19_02027	0.62	-1.2
2,122,055	-		MPMX19_02027	0.62	+0.5
2,122,055	-		MPMX19_02027	0.62	+0.1
2,122,066	+		MPMX19_02027	0.63	+1.1
2,122,066	+		MPMX19_02027	0.63	-0.3
2,122,066	+		MPMX19_02027	0.63	-1.3
2,122,066	+		MPMX19_02027	0.63	+0.4
2,122,067	-		MPMX19_02027	0.63	+0.1
2,122,067	-		MPMX19_02027	0.63	-2.4
2,122,067	-		MPMX19_02027	0.63	-0.1
2,122,072	+		MPMX19_02027	0.63	-1.4
2,122,072	+		MPMX19_02027	0.63	-2.4
2,122,072	+		MPMX19_02027	0.63	-0.8
2,122,072	+		MPMX19_02027	0.63	+0.5
2,122,072	+		MPMX19_02027	0.63	+0.6
2,122,072	+		MPMX19_02027	0.63	-1.5
2,122,072	+		MPMX19_02027	0.63	-0.2
2,122,072	+		MPMX19_02027	0.63	-1.1
2,122,072	+		MPMX19_02027	0.63	+1.1
2,122,072	+		MPMX19_02027	0.63	+0.1
2,122,072	+		MPMX19_02027	0.63	+1.4
2,122,072	+		MPMX19_02027	0.63	+1.0
2,122,072	+		MPMX19_02027	0.63	+0.5
2,122,072	+		MPMX19_02027	0.63	-1.1
2,122,073	-		MPMX19_02027	0.63	-0.1
2,122,073	-		MPMX19_02027	0.63	+0.1
2,122,073	-		MPMX19_02027	0.63	+1.0
2,122,073	-		MPMX19_02027	0.63	+0.6
2,122,073	-		MPMX19_02027	0.63	+0.7
2,122,073	-		MPMX19_02027	0.63	-1.1
2,122,073	-		MPMX19_02027	0.63	+1.4
2,122,073	-		MPMX19_02027	0.63	-2.6
2,122,073	-		MPMX19_02027	0.63	-0.4
2,122,073	-		MPMX19_02027	0.63	-2.1
2,122,276	+		MPMX19_02027	0.78	-0.6
2,122,276	+		MPMX19_02027	0.78	-0.0
2,122,276	+		MPMX19_02027	0.78	+0.4
2,122,277	-		MPMX19_02027	0.78	-0.7
2,122,277	-		MPMX19_02027	0.78	+0.0
2,122,277	-		MPMX19_02027	0.78	-0.3
2,122,277	-		MPMX19_02027	0.78	-2.3
2,122,339	+		MPMX19_02027	0.83	-0.7
2,122,339	+		MPMX19_02027	0.83	+0.1
2,122,339	+		MPMX19_02027	0.83	-1.0
2,122,339	+		MPMX19_02027	0.83	-0.9
2,122,339	+		MPMX19_02027	0.83	+0.4
2,122,339	+		MPMX19_02027	0.83	-1.5
2,122,339	+		MPMX19_02027	0.83	-2.4
2,122,339	+		MPMX19_02027	0.83	-0.5
2,122,340	-		MPMX19_02027	0.83	+1.0
2,122,340	-		MPMX19_02027	0.83	-1.2
2,122,340	-		MPMX19_02027	0.83	+0.3
2,122,340	-		MPMX19_02027	0.83	+1.7
2,122,340	-		MPMX19_02027	0.83	-1.1
2,122,340	-		MPMX19_02027	0.83	-1.5
2,122,340	-		MPMX19_02027	0.83	-0.3
2,122,516	+				+0.1
2,122,516	+				-0.7
2,122,517	-				+0.6
2,122,517	-				-0.1
2,122,517	-				+0.2
2,122,662	+		MPMX19_02028	0.27	-1.3
2,122,662	+		MPMX19_02028	0.27	-0.7
2,122,662	+		MPMX19_02028	0.27	-1.7
2,122,662	+		MPMX19_02028	0.27	+0.5
2,122,662	+		MPMX19_02028	0.27	-2.1
2,122,662	+		MPMX19_02028	0.27	+1.0
2,122,662	+		MPMX19_02028	0.27	-1.5
2,122,662	+		MPMX19_02028	0.27	-0.2
2,122,662	+		MPMX19_02028	0.27	-1.4
2,122,662	+		MPMX19_02028	0.27	+0.1
2,122,662	+		MPMX19_02028	0.27	+0.5
2,122,662	+		MPMX19_02028	0.27	+0.3
2,122,662	+		MPMX19_02028	0.27	-0.5
2,122,663	-		MPMX19_02028	0.27	-0.4
2,122,663	-		MPMX19_02028	0.27	+0.3
2,122,663	-		MPMX19_02028	0.27	+1.0
2,122,663	-		MPMX19_02028	0.27	-0.2
2,122,663	-		MPMX19_02028	0.27	-0.1
2,122,663	-		MPMX19_02028	0.27	+0.1
2,122,663	-		MPMX19_02028	0.27	+0.1
2,122,663	-		MPMX19_02028	0.27	-0.9
2,122,663	-		MPMX19_02028	0.27	+0.3
2,122,663	-		MPMX19_02028	0.27	+1.4
2,122,663	-		MPMX19_02028	0.27	+0.7
2,122,663	-		MPMX19_02028	0.27	-1.7
2,122,665	+		MPMX19_02028	0.28	-1.9
2,122,665	+		MPMX19_02028	0.28	-1.6
2,122,665	+		MPMX19_02028	0.28	-0.2
2,122,665	+		MPMX19_02028	0.28	+1.3
2,122,665	+		MPMX19_02028	0.28	+0.4
2,122,665	+		MPMX19_02028	0.28	+0.0
2,122,665	+		MPMX19_02028	0.28	-0.6
2,122,665	+		MPMX19_02028	0.28	+0.1
2,122,665	+		MPMX19_02028	0.28	-0.2
2,122,665	+		MPMX19_02028	0.28	-0.9
2,122,665	+		MPMX19_02028	0.28	+0.7
2,122,665	+		MPMX19_02028	0.28	+0.1
2,122,665	+		MPMX19_02028	0.28	+0.4
2,122,665	+		MPMX19_02028	0.28	+0.6
2,122,665	+		MPMX19_02028	0.28	-0.6
2,122,665	+		MPMX19_02028	0.28	-1.0
2,122,665	+		MPMX19_02028	0.28	+0.1
2,122,665	+		MPMX19_02028	0.28	+0.1
2,122,665	+		MPMX19_02028	0.28	+0.7
2,122,665	+		MPMX19_02028	0.28	-0.0
2,122,665	+		MPMX19_02028	0.28	-0.3
2,122,665	+		MPMX19_02028	0.28	-0.1
2,122,665	+		MPMX19_02028	0.28	+0.1
2,122,665	+		MPMX19_02028	0.28	-1.5
2,122,665	+		MPMX19_02028	0.28	+1.3
2,122,665	+		MPMX19_02028	0.28	+1.5
2,122,665	+		MPMX19_02028	0.28	+0.3
2,122,665	+		MPMX19_02028	0.28	+1.7
2,122,665	+		MPMX19_02028	0.28	-2.0
2,122,666	-		MPMX19_02028	0.28	-0.6
2,122,666	-		MPMX19_02028	0.28	-0.4
2,122,666	-		MPMX19_02028	0.28	-1.2
2,122,666	-		MPMX19_02028	0.28	-0.4
2,122,666	-		MPMX19_02028	0.28	-1.5
2,122,666	-		MPMX19_02028	0.28	-0.8
2,122,666	-		MPMX19_02028	0.28	-0.1
2,122,666	-		MPMX19_02028	0.28	-1.0
2,122,666	-		MPMX19_02028	0.28	-1.7
2,122,666	-		MPMX19_02028	0.28	+0.0
2,122,666	-		MPMX19_02028	0.28	-1.3
2,122,666	-		MPMX19_02028	0.28	-0.4
2,122,666	-		MPMX19_02028	0.28	+0.6
2,122,666	-		MPMX19_02028	0.28	-1.5
2,122,666	-		MPMX19_02028	0.28	+0.2
2,122,666	-		MPMX19_02028	0.28	+0.1
2,122,666	-		MPMX19_02028	0.28	-1.8
2,122,666	-		MPMX19_02028	0.28	-0.3
2,122,666	-		MPMX19_02028	0.28	-0.3
2,122,666	-		MPMX19_02028	0.28	+1.5
2,122,666	-		MPMX19_02028	0.28	-0.9
2,122,666	-		MPMX19_02028	0.28	-0.5
2,122,666	-		MPMX19_02028	0.28	-0.9
2,122,666	-		MPMX19_02028	0.28	-1.1
2,122,666	-		MPMX19_02028	0.28	-1.3
2,122,666	-		MPMX19_02028	0.28	+0.7
2,122,666	-		MPMX19_02028	0.28	-0.8
2,122,666	-		MPMX19_02028	0.28	+1.5
2,122,666	-		MPMX19_02028	0.28	-1.1
2,122,666	-		MPMX19_02028	0.28	+0.1
2,122,666	-		MPMX19_02028	0.28	-0.9
2,122,666	-		MPMX19_02028	0.28	-0.9
2,122,666	-		MPMX19_02028	0.28	+0.1
2,122,666	-		MPMX19_02028	0.28	-2.0
2,122,666	-		MPMX19_02028	0.28	+1.0
2,122,666	-		MPMX19_02028	0.28	+0.1
2,122,791	+		MPMX19_02028	0.70	+0.1
2,122,791	+		MPMX19_02028	0.70	-0.9
2,122,791	+		MPMX19_02028	0.70	-0.5
2,122,791	+		MPMX19_02028	0.70	-0.6
2,122,791	+		MPMX19_02028	0.70	-0.5
2,122,792	-		MPMX19_02028	0.70	+0.9
2,122,792	-		MPMX19_02028	0.70	+0.2
2,122,851	+				-1.5
2,122,851	+				+0.1
2,122,851	+				-1.2
2,122,851	+				+0.0
2,122,851	+				+0.5
2,122,851	+				+0.7
2,122,851	+				-0.4
2,122,851	+				-0.7
2,122,851	+				+2.1
2,122,852	-				-0.7
2,122,852	-				-1.7
2,122,852	-				-1.1
2,122,852	-				-1.3
2,122,852	-				-0.1
2,122,852	-				-0.7
2,122,852	-				+0.3
2,122,852	-				-0.4
2,123,115	+				+1.1
2,123,115	+				-0.3
2,123,115	+				-0.9
2,123,115	+				-0.3
2,123,116	-				-0.6
2,123,116	-				-0.5
2,123,116	-				-0.3
2,123,116	-				-0.6
2,123,116	-				-0.6
2,123,132	+				-0.4
2,123,132	+				-0.8
2,123,132	+				-0.3
2,123,132	+				+0.1
2,123,133	-				+1.7
2,123,133	-				+0.7
2,123,133	-				+0.1
2,123,133	-				-1.9
2,123,133	-				-0.9
2,123,133	-				-0.7
2,123,179	+				+0.1
2,123,179	+				-0.6
2,123,179	+				-0.6
2,123,179	+				+0.6
2,123,179	+				+0.3
2,123,179	+				+0.5
2,123,179	+				+0.1
2,123,179	+				+0.7
2,123,179	+				+0.4
2,123,179	+				-0.2
2,123,179	+				+0.6
2,123,179	+				-0.2
2,123,179	+				-0.2
2,123,180	-				-0.2
2,123,180	-				+0.6
2,123,180	-				+0.5
2,123,180	-				+0.7
2,123,180	-				-0.1
2,123,180	-				-0.6
2,123,180	-				-1.3
2,123,180	-				+0.6
2,123,180	-				-0.0
2,123,180	-				-1.1
2,123,180	-				-0.0
2,123,180	-				-0.6
2,123,180	-				-1.5
2,123,180	-				+0.5
2,123,180	-				+0.0
2,123,180	-				-0.3
2,123,335	+		MPMX19_02029	0.15	+0.8
2,123,335	+		MPMX19_02029	0.15	-1.5
2,123,335	+		MPMX19_02029	0.15	+0.2
2,123,335	+		MPMX19_02029	0.15	-1.5
2,123,335	+		MPMX19_02029	0.15	+0.9
2,123,335	+		MPMX19_02029	0.15	+0.2
2,123,336	-		MPMX19_02029	0.15	-1.7
2,123,336	-		MPMX19_02029	0.15	+0.5
2,123,545	-		MPMX19_02029	0.29	-0.9