Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01351

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,405,696	+				+0.6
1,405,696	+				+0.3
1,405,696	+				+0.8
1,405,696	+				-0.8
1,405,696	+				-1.0
1,405,696	+				+0.1
1,405,696	+				-0.5
1,405,696	+				+0.2
1,405,696	+				-2.1
1,405,696	+				-0.8
1,405,696	+				+0.3
1,405,696	+				+1.3
1,405,696	+				-0.5
1,405,696	+				+0.7
1,405,696	+				-0.4
1,405,697	-				-0.1
1,405,697	-				-0.7
1,405,697	-				-0.1
1,405,697	-				-0.4
1,405,697	-				+0.4
1,405,697	-				-0.1
1,405,697	-				-1.1
1,405,697	-				+0.0
1,405,697	-				+0.1
1,405,697	-				-0.1
1,405,840	+				-0.7
1,405,915	+				+0.1
1,405,915	+				+0.8
1,405,915	+				+0.2
1,405,915	+				-1.0
1,405,915	+				-1.0
1,405,915	+				+0.2
1,405,915	+				+0.4
1,405,916	-				-0.3
1,405,916	-				-0.7
1,405,916	-				+0.6
1,405,916	-				+0.1
1,405,916	-				+0.5
1,405,916	-				+0.0
1,405,916	-				+1.1
1,405,916	-				+0.2
1,405,916	-				+1.0
1,405,916	-				-2.6
1,405,916	-				+0.9
1,405,916	-				-1.6
1,405,927	-				+1.3
1,406,012	+				-1.4
1,406,012	+				+0.6
1,406,012	+				-0.4
1,406,012	+				+0.4
1,406,012	+				-0.1
1,406,012	+				-1.2
1,406,013	-				-1.0
1,406,013	-				+0.0
1,406,013	-				+0.3
1,406,013	-				+0.3
1,406,013	-				+0.6
1,406,013	-				-1.0
1,406,013	-				-0.2
1,406,022	+				-0.5
1,406,023	-				-0.4
1,406,029	+				+0.0
1,406,030	-				-0.6
1,406,030	-				+0.2
1,406,030	-				-1.2
1,406,598	+				+0.6
1,406,599	-				+0.0
1,406,656	+				-0.2
1,406,656	+				+0.3
1,406,656	+				+0.6
1,406,656	+				-0.1
1,406,656	+				+0.3
1,406,656	+				-0.1
1,406,656	+				-0.2
1,406,656	+				-0.4
1,406,656	+				+1.4
1,406,656	+				-0.6
1,406,656	+				+0.7
1,406,656	+				-0.1
1,406,657	-				-0.5
1,406,657	-				-0.7
1,406,657	-				-0.3
1,406,657	-				-1.5
1,406,657	-				+0.9
1,406,657	-				-1.3
1,406,857	+		MPMX19_01351	0.71	+0.2
1,406,857	+		MPMX19_01351	0.71	-1.4
1,406,857	+		MPMX19_01351	0.71	-0.5
1,406,857	+		MPMX19_01351	0.71	-0.4
1,406,857	+		MPMX19_01351	0.71	-0.1
1,406,857	+		MPMX19_01351	0.71	+0.3
1,406,857	+		MPMX19_01351	0.71	-0.3
1,406,857	+		MPMX19_01351	0.71	-0.9
1,406,857	+		MPMX19_01351	0.71	-1.6
1,406,858	-		MPMX19_01351	0.71	-1.0
1,406,858	-		MPMX19_01351	0.71	-1.9
1,406,858	-		MPMX19_01351	0.71	-0.2
1,406,858	-		MPMX19_01351	0.71	-0.7
1,406,858	-		MPMX19_01351	0.71	-1.9
1,406,858	-		MPMX19_01351	0.71	-0.7
1,406,858	-		MPMX19_01351	0.71	-0.6
1,406,858	-		MPMX19_01351	0.71	-1.3
1,406,974	+				+0.2
1,406,974	+				-0.5
1,406,974	+				+1.6
1,406,974	+				+0.4
1,406,974	+				+0.0
1,406,974	+				+1.0
1,406,974	+				+0.0
1,406,974	+				-2.0
1,406,974	+				+0.0
1,406,974	+				-0.1
1,406,974	+				-0.7
1,406,974	+				-2.9
1,406,974	+				-0.3
1,406,974	+				-0.6
1,406,974	+				-2.4
1,406,974	+				+0.4
1,406,974	+				+0.0
1,406,974	+				+0.0
1,406,974	+				-1.2
1,406,974	+				-0.7
1,406,974	+				-1.2
1,406,974	+				+2.3
1,406,974	+				-1.1
1,406,974	+				-1.1
1,406,974	+				-1.7
1,406,974	+				+2.0
1,406,974	+				-0.2
1,406,974	+				-0.2
1,406,974	+				-1.0
1,406,974	+				-0.7
1,406,974	+				+0.1
1,406,974	+				-0.5
1,406,974	+				-0.3
1,406,974	+				-0.1
1,406,974	+				-1.5
1,406,974	+				+0.3
1,406,974	+				+0.3
1,406,974	+				-0.7
1,406,974	-				-0.1
1,406,975	-				-2.9
1,406,975	-				-0.2
1,406,975	-				+0.1
1,406,975	-				-3.1
1,406,975	-				-2.2
1,406,975	-				-1.0
1,406,975	-				+0.0
1,406,975	-				+0.2
1,406,975	-				-0.7
1,406,975	-				-0.3
1,406,975	-				+0.1
1,406,975	-				+0.0
1,406,975	-				-1.7
1,406,975	-				-1.2
1,406,975	-				-1.5
1,406,975	-				+1.1
1,406,975	-				+0.5
1,406,975	-				+1.6
1,406,975	-				+0.0
1,406,975	-				+1.4
1,406,975	-				+1.1
1,406,975	-				-0.6
1,406,975	-				-1.6
1,406,975	-				-0.6
1,406,975	-				-1.9
1,406,975	-				+0.0
1,406,975	-				-0.5
1,406,975	-				+1.0
1,406,975	-				-0.9
1,406,975	-				-0.1
1,406,975	-				-0.1
1,406,975	-				-0.5
1,406,975	-				-0.4
1,406,975	-				+1.6
1,406,981	+				-2.0
1,406,981	+				+2.2
1,406,981	+				+0.2
1,406,981	+				-1.0
1,406,981	+				+0.4
1,406,981	+				-0.4
1,406,981	+				+2.2
1,406,981	+				+0.2
1,406,981	+				+0.6
1,406,981	+				-0.1
1,406,981	+				-0.4
1,406,981	+				+0.0
1,406,981	+				+2.0
1,406,981	+				-2.8
1,406,981	+				-0.2
1,406,981	+				-0.6
1,406,981	+				+0.0
1,406,981	+				-0.4
1,406,981	+				+1.4
1,406,981	+				+0.3
1,406,981	+				+0.6
1,406,982	-				-0.1
1,406,982	-				-0.5
1,406,982	-				-0.6
1,406,982	-				-1.4
1,406,982	-				+1.6
1,406,982	-				+0.4
1,406,982	-				+0.4
1,406,982	-				-0.0
1,406,982	-				+1.6
1,406,982	-				-1.2
1,406,983	-				-0.1
1,406,986	+				-0.1
1,406,987	-				-2.2
1,406,987	-				-1.9
1,406,987	-				-1.1
1,407,034	+		MPMX19_01352	0.11	-0.2
1,407,035	-		MPMX19_01352	0.11	-1.1
1,407,035	-		MPMX19_01352	0.11	+1.1
1,407,035	-		MPMX19_01352	0.11	-1.2
1,407,035	-		MPMX19_01352	0.11	-0.2
1,407,142	+		MPMX19_01352	0.28	+0.4
1,407,142	+		MPMX19_01352	0.28	-0.3
1,407,142	+		MPMX19_01352	0.28	-1.1
1,407,142	+		MPMX19_01352	0.28	-1.2
1,407,142	+		MPMX19_01352	0.28	+0.7
1,407,143	-		MPMX19_01352	0.28	-0.1
1,407,143	-		MPMX19_01352	0.28	-1.0
1,407,143	-		MPMX19_01352	0.28	-0.2
1,407,143	-		MPMX19_01352	0.28	+0.8
1,407,143	-		MPMX19_01352	0.28	+0.6
1,407,143	-		MPMX19_01352	0.28	+0.1
1,407,143	-		MPMX19_01352	0.28	+2.8
1,407,143	-		MPMX19_01352	0.28	+0.7
1,407,376	+		MPMX19_01352	0.63	+0.9
1,407,377	-		MPMX19_01352	0.63	-0.9
1,407,377	-		MPMX19_01352	0.63	-0.4
1,407,502	+		MPMX19_01352	0.82	-0.3
1,407,502	+		MPMX19_01352	0.82	-1.2
1,407,502	+		MPMX19_01352	0.82	+0.0
1,407,502	+		MPMX19_01352	0.82	-1.6
1,407,654	+				-1.7
1,407,654	+				+0.0
1,407,654	+				-0.3
1,407,654	+				-0.3
1,407,654	+				-0.9
1,407,655	-				+0.5
1,407,655	-				-0.2
1,407,655	-				-0.3
1,407,655	-				-0.5
1,407,885	+		MPMX19_01353	0.73	-0.1
1,407,885	+		MPMX19_01353	0.73	+0.0
1,407,885	+		MPMX19_01353	0.73	-0.4
1,407,885	+		MPMX19_01353	0.73	-0.2
1,407,886	-		MPMX19_01353	0.74	-0.3
1,407,886	-		MPMX19_01353	0.74	-0.5