Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01254

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,303,988	+		MPMX19_01253	0.37	+0.2
1,303,988	+		MPMX19_01253	0.37	-0.0
1,303,988	+		MPMX19_01253	0.37	+0.1
1,303,988	+		MPMX19_01253	0.37	-1.7
1,303,989	-		MPMX19_01253	0.37	-1.2
1,303,989	-		MPMX19_01253	0.37	+0.6
1,304,027	+		MPMX19_01253	0.40	+0.1
1,304,027	+		MPMX19_01253	0.40	-1.2
1,304,027	+		MPMX19_01253	0.40	-0.2
1,304,027	+		MPMX19_01253	0.40	-1.0
1,304,027	+		MPMX19_01253	0.40	-0.0
1,304,027	+		MPMX19_01253	0.40	+0.2
1,304,027	+		MPMX19_01253	0.40	-1.5
1,304,027	+		MPMX19_01253	0.40	-1.7
1,304,027	+		MPMX19_01253	0.40	-1.0
1,304,027	+		MPMX19_01253	0.40	+1.4
1,304,027	+		MPMX19_01253	0.40	-1.0
1,304,028	-		MPMX19_01253	0.40	-0.4
1,304,028	-		MPMX19_01253	0.40	-0.4
1,304,028	-		MPMX19_01253	0.40	+0.4
1,304,028	-		MPMX19_01253	0.40	-0.9
1,304,028	-		MPMX19_01253	0.40	+0.2
1,304,028	-		MPMX19_01253	0.40	-0.1
1,304,028	-		MPMX19_01253	0.40	-1.6
1,304,028	-		MPMX19_01253	0.40	-1.0
1,304,028	-		MPMX19_01253	0.40	-0.7
1,304,028	-		MPMX19_01253	0.40	-0.2
1,304,028	-		MPMX19_01253	0.40	-0.2
1,304,028	-		MPMX19_01253	0.40	+0.8
1,304,028	-		MPMX19_01253	0.40	-0.9
1,304,028	-		MPMX19_01253	0.40	-0.7
1,304,028	-		MPMX19_01253	0.40	-1.4
1,304,028	-		MPMX19_01253	0.40	-0.3
1,304,028	-		MPMX19_01253	0.40	-0.5
1,304,028	-		MPMX19_01253	0.40	-0.5
1,304,028	-		MPMX19_01253	0.40	-0.0
1,304,028	-		MPMX19_01253	0.40	-0.5
1,304,028	-		MPMX19_01253	0.40	-1.3
1,304,028	-		MPMX19_01253	0.40	+0.3
1,304,028	-		MPMX19_01253	0.40	-0.9
1,304,028	-		MPMX19_01253	0.40	-0.7
1,304,028	-		MPMX19_01253	0.40	-0.1
1,304,028	-		MPMX19_01253	0.40	-1.3
1,304,282	+		MPMX19_01253	0.60	-0.9
1,304,282	+		MPMX19_01253	0.60	-1.1
1,304,282	+		MPMX19_01253	0.60	-1.0
1,304,282	+		MPMX19_01253	0.60	-0.5
1,304,282	+		MPMX19_01253	0.60	-2.6
1,304,282	+		MPMX19_01253	0.60	-0.9
1,304,283	-		MPMX19_01253	0.60	+0.3
1,304,283	-		MPMX19_01253	0.60	+0.4
1,304,283	-		MPMX19_01253	0.60	+0.2
1,304,283	-		MPMX19_01253	0.60	+0.2
1,304,283	-		MPMX19_01253	0.60	-0.3
1,304,283	-		MPMX19_01253	0.60	-0.2
1,304,283	-		MPMX19_01253	0.60	-0.5
1,304,283	-		MPMX19_01253	0.60	-0.5
1,304,283	-		MPMX19_01253	0.60	+0.3
1,304,606	+		MPMX19_01253	0.86	-0.2
1,304,606	+		MPMX19_01253	0.86	+0.2
1,304,606	+		MPMX19_01253	0.86	-0.6
1,304,606	+		MPMX19_01253	0.86	-1.2
1,304,606	+		MPMX19_01253	0.86	+0.1
1,304,606	+		MPMX19_01253	0.86	-0.9
1,304,606	+		MPMX19_01253	0.86	-0.3
1,304,606	+		MPMX19_01253	0.86	-1.9
1,304,606	+		MPMX19_01253	0.86	-1.2
1,304,606	+		MPMX19_01253	0.86	-1.7
1,304,606	+		MPMX19_01253	0.86	+0.6
1,304,606	+		MPMX19_01253	0.86	-0.4
1,304,606	+		MPMX19_01253	0.86	+1.2
1,304,606	+		MPMX19_01253	0.86	-1.7
1,304,606	+		MPMX19_01253	0.86	+0.4
1,304,606	+		MPMX19_01253	0.86	+1.0
1,304,606	+		MPMX19_01253	0.86	-0.2
1,304,606	+		MPMX19_01253	0.86	+0.6
1,304,606	+		MPMX19_01253	0.86	-1.4
1,304,606	+		MPMX19_01253	0.86	-2.1
1,304,606	+		MPMX19_01253	0.86	-0.8
1,304,606	+		MPMX19_01253	0.86	-0.4
1,304,606	+		MPMX19_01253	0.86	-0.8
1,304,607	-		MPMX19_01253	0.86	-1.6
1,304,607	-		MPMX19_01253	0.86	+0.5
1,304,607	-		MPMX19_01253	0.86	-0.2
1,304,607	-		MPMX19_01253	0.86	-0.3
1,304,607	-		MPMX19_01253	0.86	-0.4
1,304,607	-		MPMX19_01253	0.86	-0.2
1,304,607	-		MPMX19_01253	0.86	+0.8
1,304,607	-		MPMX19_01253	0.86	+0.2
1,304,607	-		MPMX19_01253	0.86	-1.0
1,304,607	-		MPMX19_01253	0.86	-1.2
1,304,607	-		MPMX19_01253	0.86	-0.3
1,304,607	-		MPMX19_01253	0.86	-1.0
1,304,607	-		MPMX19_01253	0.86	-0.6
1,304,607	-		MPMX19_01253	0.86	-1.4
1,304,607	-		MPMX19_01253	0.86	-0.6
1,304,728	+				-1.5
1,304,728	+				-0.1
1,304,728	+				-1.0
1,304,728	+				+0.1
1,304,728	+				-1.2
1,304,728	+				-1.0
1,304,728	+				+1.4
1,304,729	-				-0.7
1,304,729	-				-0.0
1,304,729	-				+0.5
1,304,729	-				-0.9
1,304,729	-				-0.8
1,304,729	-				+0.4
1,304,840	+				-2.0
1,304,840	+				-0.7
1,304,840	+				-2.4
1,304,840	+				-1.5
1,304,840	+				-0.7
1,304,840	+				-1.3
1,304,840	+				-1.2
1,304,840	+				+0.5
1,304,840	+				+0.7
1,304,840	+				-1.0
1,304,840	+				-2.2
1,304,840	+				-1.8
1,304,840	+				+0.2
1,304,840	+				-2.3
1,304,840	+				-0.3
1,304,840	+				-0.0
1,304,840	+				-1.0
1,304,840	+				-0.2
1,304,840	+				+1.1
1,304,840	+				-0.2
1,304,840	+				-2.4
1,304,840	+				-0.9
1,304,840	+				-0.6
1,304,840	+				-1.3
1,304,840	+				-1.6
1,304,840	+				+0.1
1,304,840	+				-0.6
1,304,840	+				-2.1
1,304,840	+				+0.4
1,304,840	+				-0.2
1,304,840	+				-1.3
1,304,840	+				-0.9
1,304,840	+				-1.9
1,304,840	+				-0.6
1,304,840	+				+0.4
1,304,840	+				+0.7
1,304,840	+				-0.3
1,304,840	+				-1.1
1,304,840	+				-0.8
1,304,841	-				-0.0
1,304,841	-				-0.2
1,304,841	-				-0.4
1,304,841	-				-0.8
1,304,841	-				-1.6
1,304,841	-				-0.6
1,304,841	-				+0.2
1,304,841	-				+0.1
1,304,841	-				-0.5
1,304,841	-				+0.2
1,304,841	-				+1.0
1,304,841	-				+0.8
1,304,841	-				+0.1
1,304,841	-				-2.1
1,304,841	-				+0.8
1,304,841	-				-1.0
1,304,841	-				+1.3
1,304,841	-				-0.1
1,304,841	-				-0.7
1,304,842	+				+0.6
1,305,061	+		MPMX19_01254	0.17	-0.4
1,305,061	+		MPMX19_01254	0.17	-0.4
1,305,061	+		MPMX19_01254	0.17	+1.0
1,305,062	-		MPMX19_01254	0.17	-0.5
1,305,062	-		MPMX19_01254	0.17	-0.7
1,305,062	-		MPMX19_01254	0.17	-0.3
1,305,137	+		MPMX19_01254	0.24	-0.7
1,305,137	+		MPMX19_01254	0.24	-0.2
1,305,137	+		MPMX19_01254	0.24	+0.2
1,305,137	+		MPMX19_01254	0.24	+0.3
1,305,138	-		MPMX19_01254	0.24	+0.8
1,305,138	-		MPMX19_01254	0.24	-1.1
1,305,138	-		MPMX19_01254	0.24	-0.0
1,305,138	-		MPMX19_01254	0.24	-1.4
1,305,138	-		MPMX19_01254	0.24	-1.4
1,305,313	+		MPMX19_01254	0.41	+0.3
1,305,313	+		MPMX19_01254	0.41	+0.5
1,305,313	+		MPMX19_01254	0.41	+0.2
1,305,313	+		MPMX19_01254	0.41	+0.4
1,305,313	+		MPMX19_01254	0.41	-1.4
1,305,313	+		MPMX19_01254	0.41	-0.0
1,305,313	+		MPMX19_01254	0.41	-0.9
1,305,313	+		MPMX19_01254	0.41	-2.1
1,305,313	+		MPMX19_01254	0.41	-0.6
1,305,313	+		MPMX19_01254	0.41	+0.3
1,305,313	+		MPMX19_01254	0.41	-1.9
1,305,313	+		MPMX19_01254	0.41	-0.6
1,305,313	+		MPMX19_01254	0.41	-1.0
1,305,313	+		MPMX19_01254	0.41	+2.2
1,305,313	+		MPMX19_01254	0.41	+0.4
1,305,313	+		MPMX19_01254	0.41	-0.4
1,305,313	+		MPMX19_01254	0.41	+0.6
1,305,313	+		MPMX19_01254	0.41	-1.2
1,305,313	+		MPMX19_01254	0.41	+1.0
1,305,313	+		MPMX19_01254	0.41	-1.7
1,305,313	+		MPMX19_01254	0.41	-0.6
1,305,313	+		MPMX19_01254	0.41	-0.2
1,305,313	+		MPMX19_01254	0.41	-0.7
1,305,313	+		MPMX19_01254	0.41	+0.2
1,305,314	-		MPMX19_01254	0.41	-0.8
1,305,314	-		MPMX19_01254	0.41	-2.0
1,305,314	-		MPMX19_01254	0.41	+0.3
1,305,314	-		MPMX19_01254	0.41	-0.7
1,305,314	-		MPMX19_01254	0.41	-0.7
1,305,314	-		MPMX19_01254	0.41	-2.0
1,305,314	-		MPMX19_01254	0.41	-0.5
1,305,314	-		MPMX19_01254	0.41	-0.9
1,305,314	-		MPMX19_01254	0.41	-2.3
1,305,314	-		MPMX19_01254	0.41	+0.4
1,305,314	-		MPMX19_01254	0.41	+0.3
1,305,314	-		MPMX19_01254	0.41	-0.6
1,305,314	-		MPMX19_01254	0.41	-0.1
1,305,314	-		MPMX19_01254	0.41	-0.5
1,305,314	-		MPMX19_01254	0.41	-0.4
1,305,314	-		MPMX19_01254	0.41	-2.0
1,305,314	-		MPMX19_01254	0.41	+1.0
1,305,314	-		MPMX19_01254	0.41	-1.2
1,305,314	-		MPMX19_01254	0.41	-1.0
1,305,314	-		MPMX19_01254	0.41	-0.5
1,305,448	+		MPMX19_01254	0.54	-0.2
1,305,448	+		MPMX19_01254	0.54	-0.3
1,305,448	+		MPMX19_01254	0.54	+0.2
1,305,448	+		MPMX19_01254	0.54	-2.7
1,305,448	+		MPMX19_01254	0.54	-1.4
1,305,449	-		MPMX19_01254	0.54	+0.6
1,305,449	-		MPMX19_01254	0.54	+0.4
1,305,460	+		MPMX19_01254	0.55	-0.9
1,305,460	+		MPMX19_01254	0.55	+0.1
1,305,460	+		MPMX19_01254	0.55	-1.0
1,305,460	+		MPMX19_01254	0.55	+1.2
1,305,460	+		MPMX19_01254	0.55	-0.7
1,305,460	+		MPMX19_01254	0.55	+0.3
1,305,461	-		MPMX19_01254	0.55	-1.9
1,305,461	-		MPMX19_01254	0.55	-0.3
1,305,720	+		MPMX19_01254	0.80	-0.6
1,305,720	+		MPMX19_01254	0.80	-0.9
1,305,720	+		MPMX19_01254	0.80	+0.2
1,305,720	+		MPMX19_01254	0.80	-1.2
1,305,720	+		MPMX19_01254	0.80	-1.9
1,305,720	+		MPMX19_01254	0.80	-1.5
1,305,720	+		MPMX19_01254	0.80	+0.8
1,305,721	-		MPMX19_01254	0.80	-0.6
1,305,721	-		MPMX19_01254	0.80	+0.2
1,305,721	-		MPMX19_01254	0.80	-0.5
1,305,902	+				-0.2
1,305,902	+				+0.4
1,305,902	+				-1.1
1,305,902	+				+0.4
1,305,903	-				-1.2
1,305,903	-				-0.7
1,305,981	+				-2.0
1,305,981	+				-0.7
1,305,981	+				-0.8
1,305,982	-				-0.9
1,305,982	-				-0.7
1,305,982	-				-0.5
1,306,094	+				-2.7
1,306,095	-				-0.7
1,306,236	+		MPMX19_01255	0.43	+0.8
1,306,236	+		MPMX19_01255	0.43	-1.0
1,306,236	+		MPMX19_01255	0.43	-1.0
1,306,236	+		MPMX19_01255	0.43	+0.6
1,306,236	+		MPMX19_01255	0.43	+0.6
1,306,236	+		MPMX19_01255	0.43	-1.4
1,306,236	+		MPMX19_01255	0.43	-0.2
1,306,236	+		MPMX19_01255	0.43	-0.4
1,306,237	-		MPMX19_01255	0.44	-0.7
1,306,237	-		MPMX19_01255	0.44	-0.2
1,306,237	-		MPMX19_01255	0.44	+1.0
1,306,237	-		MPMX19_01255	0.44	+1.6
1,306,237	-		MPMX19_01255	0.44	+1.6
1,306,237	-		MPMX19_01255	0.44	-1.7
1,306,237	-		MPMX19_01255	0.44	+0.2
1,306,237	-		MPMX19_01255	0.44	-0.7
1,306,237	-		MPMX19_01255	0.44	+0.2
1,306,350	+				-1.9
1,306,350	+				-0.3
1,306,350	+				-1.4
1,306,351	-				+0.9
1,306,488	+				+0.1
1,306,488	+				-0.6
1,306,488	+				+0.1
1,306,488	+				+0.4
1,306,489	-				-0.9
1,306,489	-				+0.2
1,306,489	-				+0.3
1,306,489	-				-1.6
1,306,500	-				-0.5
1,306,635	+		MPMX19_01256	0.17	-1.0
1,306,635	+		MPMX19_01256	0.17	-0.2
1,306,635	+		MPMX19_01256	0.17	-1.6
1,306,635	+		MPMX19_01256	0.17	+0.1
1,306,635	+		MPMX19_01256	0.17	-0.1
1,306,636	-		MPMX19_01256	0.17	-1.4
1,306,636	-		MPMX19_01256	0.17	-0.5
1,306,636	-		MPMX19_01256	0.17	-0.2
1,306,636	-		MPMX19_01256	0.17	-0.1
1,306,758	-		MPMX19_01256	0.27	-1.2
1,306,861	-		MPMX19_01256	0.36	+0.7
1,306,861	-		MPMX19_01256	0.36	+1.0
1,306,861	-		MPMX19_01256	0.36	-1.2