Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00186 and MPMX19_00187 are separated by 834 nucleotides
MPMX19_00186: MPMX19_00186 - hypothetical protein, at 195,602 to 195,994
_00186
MPMX19_00187: MPMX19_00187 - Methionine aminopeptidase, at 196,829 to 197,575
_00187
Position (kb) 195
196 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 195.368 kb on + strand at 195.377 kb on + strand at 195.466 kb on - strand at 195.466 kb on - strand at 195.476 kb on - strand at 195.487 kb on + strand at 195.488 kb on - strand at 195.536 kb on + strand at 195.598 kb on + strand at 195.631 kb on - strand at 195.679 kb on + strand, within MPMX19_00186 at 195.680 kb on - strand, within MPMX19_00186 at 195.752 kb on + strand, within MPMX19_00186 at 195.762 kb on - strand, within MPMX19_00186 at 195.764 kb on - strand, within MPMX19_00186 at 195.969 kb on + strand at 196.013 kb on + strand at 196.039 kb on + strand at 196.112 kb on - strand at 196.112 kb on - strand at 196.112 kb on - strand at 196.120 kb on + strand at 196.120 kb on + strand at 196.120 kb on + strand at 196.121 kb on - strand at 196.200 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.402 kb on + strand at 196.403 kb on - strand at 196.403 kb on - strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.535 kb on + strand at 196.536 kb on - strand at 196.624 kb on - strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.826 kb on - strand at 196.826 kb on - strand at 196.826 kb on - strand at 196.826 kb on - strand at 196.857 kb on + strand at 196.857 kb on + strand at 196.858 kb on - strand at 196.858 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum remove 195,368 + -1.0 195,377 + -0.1 195,466 - -0.5 195,466 - -0.2 195,476 - +0.2 195,487 + +0.6 195,488 - -0.8 195,536 + -1.2 195,598 + -0.1 195,631 - -0.1 195,679 + MPMX19_00186 0.20 -2.1 195,680 - MPMX19_00186 0.20 -1.9 195,752 + MPMX19_00186 0.38 -0.8 195,762 - MPMX19_00186 0.41 -0.5 195,764 - MPMX19_00186 0.41 -1.0 195,969 + -2.8 196,013 + -0.8 196,039 + -1.0 196,112 - -0.1 196,112 - -1.1 196,112 - +0.4 196,120 + +0.1 196,120 + -0.0 196,120 + -0.2 196,121 - -1.5 196,200 + -0.5 196,328 + -0.2 196,328 + -0.0 196,328 + -0.4 196,328 + -0.7 196,328 + +0.5 196,328 + -1.3 196,328 + -0.3 196,328 + -0.2 196,328 + -1.7 196,328 + -0.9 196,329 - -1.3 196,329 - -0.5 196,329 - +0.8 196,329 - +0.2 196,329 - +0.3 196,329 - +0.5 196,329 - +0.6 196,329 - -1.2 196,329 - -0.4 196,329 - +0.5 196,329 - -0.3 196,402 + +0.6 196,403 - -0.9 196,403 - -1.7 196,478 + -1.7 196,478 + -1.5 196,478 + -0.5 196,478 + -2.1 196,478 + -1.4 196,478 + +0.5 196,478 + +0.4 196,478 + +0.6 196,479 - +1.3 196,479 - -1.1 196,479 - -0.2 196,479 - -1.7 196,479 - -0.8 196,479 - -2.6 196,479 - -1.1 196,535 + -0.9 196,536 - +0.1 196,624 - -0.5 196,825 + -1.4 196,825 + -1.2 196,825 + -0.9 196,825 + -2.7 196,825 + -0.2 196,825 + -0.0 196,825 + +0.7 196,825 + -2.0 196,826 - +1.2 196,826 - +0.2 196,826 - -1.8 196,826 - -1.4 196,857 + +1.0 196,857 + -0.5 196,858 - -0.4 196,858 - -0.6
Or see this region's nucleotide sequence