Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00009

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
9,007	+		MPMX19_00007	0.78	+0.3
9,007	+		MPMX19_00007	0.78	-0.8
9,007	+		MPMX19_00007	0.78	+0.3
9,007	+		MPMX19_00007	0.78	+0.5
9,007	+		MPMX19_00007	0.78	-0.1
9,007	+		MPMX19_00007	0.78	+0.9
9,007	+		MPMX19_00007	0.78	-0.4
9,007	+		MPMX19_00007	0.78	+0.8
9,007	+		MPMX19_00007	0.78	+1.4
9,007	+		MPMX19_00007	0.78	-1.0
9,007	+		MPMX19_00007	0.78	-0.2
9,007	+		MPMX19_00007	0.78	-1.0
9,007	+		MPMX19_00007	0.78	-0.1
9,007	+		MPMX19_00007	0.78	+0.1
9,007	+		MPMX19_00007	0.78	+0.0
9,007	+		MPMX19_00007	0.78	+0.7
9,007	+		MPMX19_00007	0.78	+1.3
9,008	-		MPMX19_00007	0.78	-0.5
9,008	-		MPMX19_00007	0.78	+0.8
9,008	-		MPMX19_00007	0.78	-1.2
9,008	-		MPMX19_00007	0.78	+0.0
9,008	-		MPMX19_00007	0.78	-1.5
9,008	-		MPMX19_00007	0.78	+0.5
9,008	-		MPMX19_00007	0.78	+0.9
9,008	-		MPMX19_00007	0.78	+0.4
9,008	-		MPMX19_00007	0.78	-0.9
9,008	-		MPMX19_00007	0.78	+0.2
9,008	-		MPMX19_00007	0.78	-1.2
9,079	+		MPMX19_00007	0.81	-0.5
9,079	+		MPMX19_00007	0.81	-0.2
9,079	+		MPMX19_00007	0.81	+0.4
9,079	+		MPMX19_00007	0.81	-0.1
9,079	+		MPMX19_00007	0.81	+0.5
9,079	+		MPMX19_00007	0.81	-0.1
9,079	+		MPMX19_00007	0.81	+0.4
9,079	+		MPMX19_00007	0.81	-0.8
9,079	+		MPMX19_00007	0.81	-0.2
9,079	+		MPMX19_00007	0.81	-0.0
9,079	+		MPMX19_00007	0.81	-1.9
9,079	+		MPMX19_00007	0.81	-0.7
9,079	+		MPMX19_00007	0.81	+0.2
9,079	+		MPMX19_00007	0.81	-1.0
9,079	+		MPMX19_00007	0.81	+0.9
9,079	+		MPMX19_00007	0.81	+1.1
9,080	-		MPMX19_00007	0.81	+0.6
9,080	-		MPMX19_00007	0.81	+1.6
9,080	-		MPMX19_00007	0.81	-1.5
9,080	-		MPMX19_00007	0.81	-1.1
9,080	-		MPMX19_00007	0.81	+0.8
9,080	-		MPMX19_00007	0.81	-0.4
9,080	-		MPMX19_00007	0.81	-1.5
9,080	-		MPMX19_00007	0.81	-0.2
9,080	-		MPMX19_00007	0.81	+1.0
9,080	-		MPMX19_00007	0.81	+0.4
9,080	-		MPMX19_00007	0.81	-0.1
9,080	-		MPMX19_00007	0.81	+0.7
9,080	-		MPMX19_00007	0.81	-1.5
9,080	-		MPMX19_00007	0.81	-1.8
9,080	-		MPMX19_00007	0.81	-0.2
9,080	-		MPMX19_00007	0.81	-0.1
9,316	+		MPMX19_00007	0.90	-1.5
9,316	+		MPMX19_00007	0.90	-0.2
9,316	+		MPMX19_00007	0.90	-1.1
9,316	+		MPMX19_00007	0.90	-0.0
9,316	+		MPMX19_00007	0.90	-0.7
9,317	-				+0.4
9,317	-				-0.8
9,317	-				+0.6
9,317	-				-0.4
9,317	-				-0.2
9,317	-				+0.0
9,317	-				+0.1
9,400	+				-0.0
9,400	+				-1.1
9,400	+				+0.2
9,400	+				+0.4
9,400	+				+0.2
9,400	+				-1.0
9,400	+				-1.5
9,400	+				+0.8
9,400	+				-0.4
9,400	+				-0.4
9,400	+				-1.6
9,400	+				+0.5
9,400	+				+1.0
9,401	-				-1.3
9,401	-				+0.2
9,401	-				-0.5
9,401	-				+0.6
9,401	-				-0.2
9,401	-				-1.0
9,401	-				-1.0
9,401	-				-1.6
9,401	-				-1.2
9,401	-				+0.1
9,401	-				-0.4
9,401	-				-0.2
9,401	-				+0.3
9,401	-				-2.2
9,401	-				-1.0
9,478	+				-0.2
9,478	+				+0.3
9,478	+				+1.2
9,478	+				+0.7
9,478	+				+0.5
9,478	+				+0.5
9,478	+				+0.1
9,478	+				+1.2
9,478	+				+0.2
9,478	+				-1.5
9,478	+				-0.1
9,478	+				-0.5
9,478	+				-0.0
9,478	+				-1.5
9,478	+				-0.7
9,478	+				-1.1
9,479	-				-1.4
9,479	-				+0.0
9,479	-				-1.0
9,479	-				+0.5
9,479	-				-1.0
9,479	-				+1.2
9,479	-				+0.6
9,479	-				+0.5
9,479	-				-1.7
9,479	-				-1.4
9,479	-				-1.7
9,479	-				-1.0
9,479	-				+0.5
9,479	-				+1.4
9,479	-				-1.7
9,479	-				-1.1
9,575	+				+0.4
9,575	+				+1.2
9,576	-				+1.0
9,624	+				+1.6
9,624	+				+1.0
9,624	+				+0.6
9,624	+				+0.0
9,624	+				-0.9
9,624	+				-2.3
9,624	+				-0.0
9,624	+				-0.4
9,624	+				+0.8
9,624	+				-0.9
9,624	+				-1.5
9,624	+				-0.8
9,624	+				-1.0
9,624	+				+0.2
9,624	+				+0.3
9,624	+				-1.7
9,624	+				-0.9
9,624	+				+0.1
9,624	+				+0.3
9,624	+				+0.9
9,624	+				-0.7
9,625	-				+0.4
9,625	-				+0.4
9,625	-				-0.8
9,625	-				-1.8
9,625	-				+1.4
9,625	-				+0.2
9,625	-				+0.8
9,625	-				+0.1
9,625	-				+0.1
9,625	-				+1.4
9,625	-				+0.3
9,625	-				+1.8
9,625	-				+1.0
9,625	-				-0.2
9,625	-				-0.6
9,625	-				-0.5
9,625	-				+0.8
9,625	-				+0.0
9,625	-				-2.4
9,625	-				-1.2
9,625	-				-1.4
9,625	-				-1.2
9,625	-				+0.2
9,669	+				+0.3
9,744	+		MPMX19_00008	0.56	+1.5
9,744	+		MPMX19_00008	0.56	+0.9
9,744	+		MPMX19_00008	0.56	-1.4
9,745	-		MPMX19_00008	0.57	+1.3
9,745	-		MPMX19_00008	0.57	+0.3
9,755	+		MPMX19_00008	0.64	-2.4
9,755	+		MPMX19_00008	0.64	-2.8
9,756	-		MPMX19_00008	0.65	-0.1
9,756	-		MPMX19_00008	0.65	-1.1
9,756	-		MPMX19_00008	0.65	-1.6
9,939	+				-0.8
9,939	+				-0.3
9,939	+				-0.7
9,939	+				-1.2
9,939	+				+1.0
9,939	+				+1.2
9,939	+				-0.2
9,939	+				-1.2
9,939	+				+1.8
9,939	+				+0.8
9,939	+				-1.5
9,939	+				-0.0
9,939	+				-0.7
9,939	+				+0.6
9,940	-				-1.0
9,940	-				+0.3
9,940	-				-1.3
9,940	-				+0.1
9,940	-				-1.1
9,940	-				+0.6
9,940	-				-0.9
9,940	-				-0.9
9,940	-				+0.6
10,059	+		MPMX19_00009	0.20	-0.4
10,059	+		MPMX19_00009	0.20	-0.7
10,059	+		MPMX19_00009	0.20	-0.1
10,059	+		MPMX19_00009	0.20	-0.4
10,059	+		MPMX19_00009	0.20	-2.9
10,059	+		MPMX19_00009	0.20	+0.1
10,059	+		MPMX19_00009	0.20	-0.5
10,059	+		MPMX19_00009	0.20	-0.4
10,059	+		MPMX19_00009	0.20	-1.0
10,059	+		MPMX19_00009	0.20	+1.5
10,059	+		MPMX19_00009	0.20	+1.0
10,059	+		MPMX19_00009	0.20	-0.9
10,059	+		MPMX19_00009	0.20	-1.8
10,059	+		MPMX19_00009	0.20	-0.7
10,059	+		MPMX19_00009	0.20	+0.5
10,060	-		MPMX19_00009	0.20	-0.2
10,060	-		MPMX19_00009	0.20	+0.5
10,060	-		MPMX19_00009	0.20	+0.7
10,060	-		MPMX19_00009	0.20	-0.5
10,060	-		MPMX19_00009	0.20	+0.3
10,060	-		MPMX19_00009	0.20	+0.1
10,060	-		MPMX19_00009	0.20	-1.0
10,060	-		MPMX19_00009	0.20	+0.8
10,060	-		MPMX19_00009	0.20	+0.4
10,060	-		MPMX19_00009	0.20	-1.0
10,060	-		MPMX19_00009	0.20	-2.0
10,139	+		MPMX19_00009	0.33	+0.3
10,139	+		MPMX19_00009	0.33	+0.2
10,139	+		MPMX19_00009	0.33	-0.0
10,139	+		MPMX19_00009	0.33	+1.0
10,139	+		MPMX19_00009	0.33	+0.3
10,139	+		MPMX19_00009	0.33	+0.5
10,140	-		MPMX19_00009	0.33	-1.4
10,140	-		MPMX19_00009	0.33	-0.1
10,140	-		MPMX19_00009	0.33	-0.1
10,140	-		MPMX19_00009	0.33	-0.5
10,140	-		MPMX19_00009	0.33	+0.6
10,361	+		MPMX19_00009	0.70	-0.8
10,361	+		MPMX19_00009	0.70	+0.2
10,361	+		MPMX19_00009	0.70	+1.1
10,361	+		MPMX19_00009	0.70	-0.2
10,362	-		MPMX19_00009	0.71	-0.5
10,362	-		MPMX19_00009	0.71	-1.4
10,362	-		MPMX19_00009	0.71	-0.3
10,362	-		MPMX19_00009	0.71	+0.9
10,568	+				-0.6
10,568	+				-0.9
10,568	+				+0.1
10,568	+				-1.4
10,568	+				+0.5
10,569	-				-1.4
10,569	-				-1.4
10,569	-				+0.9
10,569	-				-1.4
10,569	-				+1.1
10,569	-				+0.3
10,590	+				-1.9
10,590	+				-1.1
10,590	+				-0.2
10,590	+				-0.0
10,590	+				+0.2
10,590	+				+1.0
10,590	+				-0.8
10,590	+				-1.0
10,590	+				+0.3
10,590	+				-0.2
10,590	+				+0.2
10,591	-				+1.8
10,591	-				+0.2
10,591	-				+0.6
10,591	-				-0.7
10,591	-				-1.7
10,591	-				-1.1
10,591	-				-0.9
10,591	-				+0.6
10,591	-				-0.4
10,591	-				+0.3
10,591	-				-0.1
10,591	-				-1.1
10,591	-				+0.7
10,591	-				+1.4
10,591	-				+1.8
10,591	-				+0.4
10,693	-				-0.1
10,702	+				-1.1
10,702	+				+0.8
10,702	+				+0.3
10,702	+				-0.5
10,702	+				-2.0
10,703	-				+0.0
10,703	-				-0.3
10,731	+				+0.9
10,731	+				+0.2
10,731	+				+0.1
10,731	+				-1.4
10,731	+				-0.0
10,732	-				+0.1
10,732	-				-0.3
10,732	-				-0.4
10,732	-				-1.0
11,088	+		MPMX19_00010	0.42	-0.8
11,088	+		MPMX19_00010	0.42	+0.2
11,088	+		MPMX19_00010	0.42	-0.3
11,089	-		MPMX19_00010	0.42	+1.6
11,089	-		MPMX19_00010	0.42	-1.2
11,089	-		MPMX19_00010	0.42	-0.5
11,089	-		MPMX19_00010	0.42	-1.2
11,089	-		MPMX19_00010	0.42	+1.1
11,089	-		MPMX19_00010	0.42	+0.8
11,286	+		MPMX19_00010	0.68	-0.0
11,286	+		MPMX19_00010	0.68	-0.9
11,287	-		MPMX19_00010	0.68	-1.2
11,287	-		MPMX19_00010	0.68	-0.1
11,287	-		MPMX19_00010	0.68	-0.5
11,287	-		MPMX19_00010	0.68	-1.4
11,287	-		MPMX19_00010	0.68	+0.3
11,287	-		MPMX19_00010	0.68	-0.8
11,287	-		MPMX19_00010	0.68	+0.5
11,478	+				-0.4
11,478	+				-1.0
11,478	+				-1.0
11,479	-				-1.0
11,479	-				-1.7