Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03348

Experiment: T5 MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T5 MOI1
3,494,787	-				-1.0
3,494,789	+				+0.4
3,494,790	-				-0.7
3,494,893	-				+0.0
3,494,915	+		OHPLBJKB_03347	0.11	+0.4
3,494,960	-		OHPLBJKB_03347	0.16	-1.4
3,494,992	+		OHPLBJKB_03347	0.19	+0.1
3,494,993	-		OHPLBJKB_03347	0.19	-0.3
3,495,020	+		OHPLBJKB_03347	0.22	+0.7
3,495,020	+		OHPLBJKB_03347	0.22	-1.1
3,495,033	+		OHPLBJKB_03347	0.24	+0.5
3,495,083	+		OHPLBJKB_03347	0.29	-0.8
3,495,084	-		OHPLBJKB_03347	0.29	+0.1
3,495,084	-		OHPLBJKB_03347	0.29	+0.2
3,495,114	+		OHPLBJKB_03347	0.32	-0.1
3,495,114	+		OHPLBJKB_03347	0.32	+0.0
3,495,115	-		OHPLBJKB_03347	0.32	-1.8
3,495,115	-		OHPLBJKB_03347	0.32	+0.5
3,495,115	-		OHPLBJKB_03347	0.32	+0.9
3,495,115	-		OHPLBJKB_03347	0.32	+0.1
3,495,115	-		OHPLBJKB_03347	0.32	+0.5
3,495,206	+		OHPLBJKB_03347	0.41	+1.0
3,495,207	-		OHPLBJKB_03347	0.41	-0.3
3,495,207	-		OHPLBJKB_03347	0.41	+0.4
3,495,227	-		OHPLBJKB_03347	0.44	+0.5
3,495,236	+		OHPLBJKB_03347	0.44	-0.0
3,495,237	-		OHPLBJKB_03347	0.45	-0.2
3,495,251	-		OHPLBJKB_03347	0.46	-0.5
3,495,282	+		OHPLBJKB_03347	0.49	-0.2
3,495,282	+		OHPLBJKB_03347	0.49	-0.9
3,495,289	-		OHPLBJKB_03347	0.50	-1.5
3,495,289	-		OHPLBJKB_03347	0.50	-0.4
3,495,306	+		OHPLBJKB_03347	0.52	-0.5
3,495,320	-		OHPLBJKB_03347	0.53	-0.3
3,495,320	-		OHPLBJKB_03347	0.53	+0.1
3,495,368	-		OHPLBJKB_03347	0.58	-0.1
3,495,377	+		OHPLBJKB_03347	0.59	-0.7
3,495,424	+		OHPLBJKB_03347	0.64	-1.6
3,495,424	+		OHPLBJKB_03347	0.64	-2.2
3,495,425	-		OHPLBJKB_03347	0.64	+0.0
3,495,425	-		OHPLBJKB_03347	0.64	-1.0
3,495,474	-		OHPLBJKB_03347	0.69	+1.5
3,495,552	+		OHPLBJKB_03347	0.77	-0.4
3,495,635	-		OHPLBJKB_03347	0.85	+0.8
3,495,648	+		OHPLBJKB_03347	0.87	-0.6
3,495,648	+		OHPLBJKB_03347	0.87	-0.6
3,495,649	-		OHPLBJKB_03347	0.87	-0.7
3,495,649	-		OHPLBJKB_03347	0.87	+0.5
3,495,653	-		OHPLBJKB_03347	0.87	-0.9
3,495,735	-				+0.3
3,495,777	+				-0.2
3,495,777	+				-0.1
3,495,777	+				-1.6
3,495,777	+				-1.0
3,495,778	-				-0.5
3,495,824	+				+0.6
3,495,824	+				+1.8
3,495,939	-		OHPLBJKB_03348	0.12	-0.2
3,495,946	+		OHPLBJKB_03348	0.12	+0.2
3,495,946	+		OHPLBJKB_03348	0.12	+0.3
3,495,946	+		OHPLBJKB_03348	0.12	-0.7
3,495,947	-		OHPLBJKB_03348	0.12	+0.1
3,495,947	-		OHPLBJKB_03348	0.12	-0.8
3,495,948	+		OHPLBJKB_03348	0.12	-0.2
3,495,949	-		OHPLBJKB_03348	0.12	+0.1
3,495,949	-		OHPLBJKB_03348	0.12	-0.7
3,496,067	+		OHPLBJKB_03348	0.20	+0.9
3,496,067	+		OHPLBJKB_03348	0.20	-1.0
3,496,067	+		OHPLBJKB_03348	0.20	-1.9
3,496,116	+		OHPLBJKB_03348	0.23	+0.6
3,496,116	+		OHPLBJKB_03348	0.23	+0.8
3,496,174	-		OHPLBJKB_03348	0.27	-0.0
3,496,174	-		OHPLBJKB_03348	0.27	+0.6
3,496,194	-		OHPLBJKB_03348	0.29	-0.1
3,496,212	-		OHPLBJKB_03348	0.30	-0.5
3,496,259	-		OHPLBJKB_03348	0.33	-1.9
3,496,259	-		OHPLBJKB_03348	0.33	-1.1
3,496,259	-		OHPLBJKB_03348	0.33	-1.0
3,496,290	-		OHPLBJKB_03348	0.35	-0.1
3,496,292	+		OHPLBJKB_03348	0.35	+0.2
3,496,293	-		OHPLBJKB_03348	0.35	+0.9
3,496,293	-		OHPLBJKB_03348	0.35	+1.1
3,496,368	+		OHPLBJKB_03348	0.40	+0.3
3,496,436	+		OHPLBJKB_03348	0.45	-1.0
3,496,436	+		OHPLBJKB_03348	0.45	-0.5
3,496,437	-		OHPLBJKB_03348	0.45	+0.3
3,496,439	+		OHPLBJKB_03348	0.45	+1.2
3,496,443	+		OHPLBJKB_03348	0.45	-0.0
3,496,443	+		OHPLBJKB_03348	0.45	+1.3
3,496,443	+		OHPLBJKB_03348	0.45	+0.6
3,496,444	-		OHPLBJKB_03348	0.46	-1.1
3,496,448	-		OHPLBJKB_03348	0.46	+1.3
3,496,448	-		OHPLBJKB_03348	0.46	-0.5
3,496,464	+		OHPLBJKB_03348	0.47	-0.8
3,496,470	-		OHPLBJKB_03348	0.47	+0.9
3,496,626	-		OHPLBJKB_03348	0.58	-0.6
3,496,626	-		OHPLBJKB_03348	0.58	+0.3
3,496,714	-		OHPLBJKB_03348	0.64	-0.6
3,496,803	-		OHPLBJKB_03348	0.70	+0.0
3,496,848	-		OHPLBJKB_03348	0.73	+0.3
3,496,871	+		OHPLBJKB_03348	0.74	-1.1
3,497,105	+				+0.5
3,497,106	-				+0.4
3,497,171	+				+1.4
3,497,171	+				-0.4
3,497,172	-				-0.1
3,497,225	+				-1.4
3,497,226	-				-0.0
3,497,226	-				-0.6
3,497,305	+				-1.0
3,497,340	+				-0.9
3,497,340	+				-0.0
3,497,340	+				-1.2
3,497,341	-				+0.3
3,497,341	-				+0.0
3,497,357	+				+0.6
3,497,372	+				-0.7
3,497,373	-				-0.8
3,497,373	-				-0.1
3,497,373	-				+0.9
3,497,373	-				+0.3
3,497,373	-				+1.1
3,497,376	+				+0.7
3,497,376	+				+0.0
3,497,377	-				-0.0
3,497,377	-				-2.4
3,497,465	-		OHPLBJKB_03349	0.17	-0.5
3,497,485	+		OHPLBJKB_03349	0.19	-1.6
3,497,485	+		OHPLBJKB_03349	0.19	+0.4
3,497,486	-		OHPLBJKB_03349	0.19	-1.1
3,497,489	+		OHPLBJKB_03349	0.19	+0.5
3,497,490	-		OHPLBJKB_03349	0.19	-0.6
3,497,786	+		OHPLBJKB_03349	0.49	-1.3
3,497,787	-		OHPLBJKB_03349	0.49	+0.4
3,497,815	+		OHPLBJKB_03349	0.52	-0.1
3,497,815	+		OHPLBJKB_03349	0.52	-0.2
3,497,816	-		OHPLBJKB_03349	0.52	-0.1
3,497,816	-		OHPLBJKB_03349	0.52	+0.3
3,497,824	+		OHPLBJKB_03349	0.53	-0.4
3,497,824	+		OHPLBJKB_03349	0.53	+0.3
3,497,825	-		OHPLBJKB_03349	0.53	+0.2
3,497,825	-		OHPLBJKB_03349	0.53	-1.9
3,497,856	-		OHPLBJKB_03349	0.56	+0.7
3,497,856	-		OHPLBJKB_03349	0.56	+0.1
3,497,866	+		OHPLBJKB_03349	0.57	+2.1
3,497,867	-		OHPLBJKB_03349	0.57	-1.6
3,498,014	+		OHPLBJKB_03349	0.72	+0.5
3,498,015	-		OHPLBJKB_03349	0.72	-0.8
3,498,017	+		OHPLBJKB_03349	0.73	+0.0
3,498,018	-		OHPLBJKB_03349	0.73	+0.3
3,498,042	+		OHPLBJKB_03349	0.75	-0.0
3,498,042	+		OHPLBJKB_03349	0.75	-0.4
3,498,081	-		OHPLBJKB_03349	0.79	+0.5
3,498,185	+		OHPLBJKB_03349	0.90	+1.3
3,498,186	-		OHPLBJKB_03349	0.90	-0.3