Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17280

Experiment: Bas55

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas55
2,202,307	+	yhaM	HEPCGN_17270	0.59	+1.8
2,202,337	+	yhaM	HEPCGN_17270	0.61	+0.6
2,202,337	+	yhaM	HEPCGN_17270	0.61	-0.6
2,202,337	+	yhaM	HEPCGN_17270	0.61	-0.2
2,202,338	-	yhaM	HEPCGN_17270	0.62	+1.4
2,202,461	+	yhaM	HEPCGN_17270	0.71	-1.0
2,202,688	-	yhaM	HEPCGN_17270	0.88	+1.2
2,202,774	+				-0.1
2,202,908	-				-1.7
2,203,163	+				-0.1
2,203,164	-				-0.1
2,203,164	-				-0.1
2,203,215	+				-0.1
2,203,216	-				-0.6
2,203,222	-				+0.1
2,203,374	+	yhaK	HEPCGN_17280	0.30	+0.7
2,203,439	-	yhaK	HEPCGN_17280	0.39	-1.1
2,203,459	-	yhaK	HEPCGN_17280	0.42	+0.1
2,203,459	-	yhaK	HEPCGN_17280	0.42	-0.2
2,203,581	+	yhaK	HEPCGN_17280	0.60	-0.4
2,203,581	+	yhaK	HEPCGN_17280	0.60	+0.8
2,203,581	+	yhaK	HEPCGN_17280	0.60	-0.2
2,203,640	+	yhaK	HEPCGN_17280	0.68	+0.4
2,203,670	-	yhaK	HEPCGN_17280	0.72	-1.9
2,203,755	-	yhaK	HEPCGN_17280	0.84	-0.4
2,203,797	+				-0.3
2,203,798	-				-0.6
2,203,821	-				+1.1
2,203,863	+				-0.9
2,203,897	-				+0.5
2,204,082	-	yhaJ	HEPCGN_17285	0.13	-0.0
2,204,082	-	yhaJ	HEPCGN_17285	0.13	-0.9
2,204,082	-	yhaJ	HEPCGN_17285	0.13	+0.8
2,204,085	+	yhaJ	HEPCGN_17285	0.13	-0.5
2,204,085	+	yhaJ	HEPCGN_17285	0.13	+0.3
2,204,085	+	yhaJ	HEPCGN_17285	0.13	-0.6
2,204,085	+	yhaJ	HEPCGN_17285	0.13	-0.6
2,204,086	-	yhaJ	HEPCGN_17285	0.13	+0.3
2,204,213	+	yhaJ	HEPCGN_17285	0.27	-0.2
2,204,222	+	yhaJ	HEPCGN_17285	0.28	+0.8
2,204,471	+	yhaJ	HEPCGN_17285	0.56	+0.6
2,204,472	-	yhaJ	HEPCGN_17285	0.56	-1.0
2,204,472	-	yhaJ	HEPCGN_17285	0.56	+1.0
2,204,487	+	yhaJ	HEPCGN_17285	0.58	-0.4
2,204,488	-	yhaJ	HEPCGN_17285	0.58	+0.5
2,204,488	-	yhaJ	HEPCGN_17285	0.58	+0.4
2,204,658	-	yhaJ	HEPCGN_17285	0.77	-1.2
2,204,805	-				-1.0
2,204,805	-				-0.5