Strain Fitness in Escherichia coli ECOR38 around HEPCGN_21830

Experiment: Bas19

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas19
3,121,065	+				+0.0
3,121,192	+	mepA	HEPCGN_21825	0.13	+0.3
3,121,206	-	mepA	HEPCGN_21825	0.15	-0.3
3,121,214	+	mepA	HEPCGN_21825	0.16	+0.1
3,121,215	-	mepA	HEPCGN_21825	0.16	-0.8
3,121,255	-	mepA	HEPCGN_21825	0.21	-0.6
3,121,269	-	mepA	HEPCGN_21825	0.23	-0.5
3,121,313	+	mepA	HEPCGN_21825	0.28	-0.1
3,121,373	+	mepA	HEPCGN_21825	0.35	-1.6
3,121,676	+	mepA	HEPCGN_21825	0.72	+0.4
3,121,709	+	mepA	HEPCGN_21825	0.76	+0.7
3,121,717	+	mepA	HEPCGN_21825	0.77	-0.9
3,121,717	+	mepA	HEPCGN_21825	0.77	+0.4
3,121,723	+	mepA	HEPCGN_21825	0.78	-0.2
3,121,905	+				-0.7
3,121,906	-				-0.2
3,121,919	-				-0.6
3,121,919	-				-0.5
3,121,921	+				+0.5
3,121,921	+				-0.4
3,122,074	+	yfcA	HEPCGN_21830	0.21	+0.3
3,122,113	+	yfcA	HEPCGN_21830	0.25	+0.3
3,122,113	+	yfcA	HEPCGN_21830	0.25	-0.2
3,122,114	-	yfcA	HEPCGN_21830	0.26	-0.8
3,122,114	-	yfcA	HEPCGN_21830	0.26	+0.4
3,122,117	+	yfcA	HEPCGN_21830	0.26	-0.9
3,122,118	-	yfcA	HEPCGN_21830	0.26	+0.2
3,122,118	-	yfcA	HEPCGN_21830	0.26	+0.4
3,122,213	+	yfcA	HEPCGN_21830	0.38	+1.5
3,122,214	-	yfcA	HEPCGN_21830	0.38	-1.6
3,122,214	-	yfcA	HEPCGN_21830	0.38	-0.0
3,122,325	-	yfcA	HEPCGN_21830	0.52	-1.6
3,122,325	-	yfcA	HEPCGN_21830	0.52	-0.7
3,122,470	-	yfcA	HEPCGN_21830	0.70	-1.2
3,122,470	-	yfcA	HEPCGN_21830	0.70	-1.8
3,122,665	-				-0.8
3,122,724	+				+0.4
3,122,760	+				+0.3
3,122,818	+	epmC	HEPCGN_21835	0.19	+0.6
3,122,819	-	epmC	HEPCGN_21835	0.19	+0.4
3,122,845	+	epmC	HEPCGN_21835	0.23	+0.0
3,122,845	+	epmC	HEPCGN_21835	0.23	-0.7
3,122,845	+	epmC	HEPCGN_21835	0.23	-0.2
3,122,846	-	epmC	HEPCGN_21835	0.24	-0.2
3,122,846	-	epmC	HEPCGN_21835	0.24	-0.8
3,122,846	-	epmC	HEPCGN_21835	0.24	-0.2
3,122,875	+	epmC	HEPCGN_21835	0.29	+0.8
3,122,910	+	epmC	HEPCGN_21835	0.35	+1.1
3,122,910	+	epmC	HEPCGN_21835	0.35	-2.1
3,122,956	+	epmC	HEPCGN_21835	0.44	-0.4
3,123,070	-	epmC	HEPCGN_21835	0.64	+0.2
3,123,129	-	epmC	HEPCGN_21835	0.75	+1.0
3,123,189	+	epmC	HEPCGN_21835	0.86	-0.5
3,123,225	+				+0.5
3,123,456	-	yfcL	HEPCGN_21840	0.57	+0.2
3,123,459	+	yfcL	HEPCGN_21840	0.58	-1.4
3,123,459	+	yfcL	HEPCGN_21840	0.58	-0.5
3,123,460	-	yfcL	HEPCGN_21840	0.58	+0.4
3,123,460	-	yfcL	HEPCGN_21840	0.58	-0.8
3,123,460	-	yfcL	HEPCGN_21840	0.58	-1.1
3,123,460	-	yfcL	HEPCGN_21840	0.58	-1.1
3,123,460	-	yfcL	HEPCGN_21840	0.58	-2.2
3,123,460	-	yfcL	HEPCGN_21840	0.58	-0.4
3,123,537	+	yfcL	HEPCGN_21840	0.86	+1.7
3,123,538	-	yfcL	HEPCGN_21840	0.86	-0.3
3,123,538	-	yfcL	HEPCGN_21840	0.86	+0.7
3,123,574	+				+0.4
3,123,574	+				-0.1
3,123,575	-				+0.1
3,123,575	-				-0.6
3,123,578	+				-0.3
3,123,578	+				-0.5
3,123,578	+				-0.4
3,123,578	+				-0.4
3,123,579	-				-0.1
3,123,634	-				+0.3