Strain Fitness in Escherichia coli ECOR38 around HEPCGN_16485

Experiment: Bas19

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas19
2,044,027	-	acrE	HEPCGN_16480	0.49	-0.3
2,044,066	-	acrE	HEPCGN_16480	0.53	+0.1
2,044,095	+	acrE	HEPCGN_16480	0.55	+0.4
2,044,095	+	acrE	HEPCGN_16480	0.55	-0.2
2,044,095	+	acrE	HEPCGN_16480	0.55	-0.4
2,044,187	+	acrE	HEPCGN_16480	0.63	+0.6
2,044,188	-	acrE	HEPCGN_16480	0.63	-0.2
2,044,314	-	acrE	HEPCGN_16480	0.74	-0.4
2,044,420	+	acrE	HEPCGN_16480	0.83	+1.2
2,044,422	+	acrE	HEPCGN_16480	0.84	-0.3
2,044,422	+	acrE	HEPCGN_16480	0.84	-0.9
2,044,427	+	acrE	HEPCGN_16480	0.84	-0.6
2,044,485	+	acrE	HEPCGN_16480	0.89	-0.8
2,044,540	-				-0.1
2,044,573	-				+0.6
2,044,642	-				-0.7
2,044,933	+				-0.4
2,045,095	+	acrS	HEPCGN_16485	0.13	-0.2
2,045,186	+	acrS	HEPCGN_16485	0.27	-1.1
2,045,224	+	acrS	HEPCGN_16485	0.32	-0.2
2,045,224	+	acrS	HEPCGN_16485	0.32	+1.2
2,045,307	-	acrS	HEPCGN_16485	0.45	+0.2
2,045,501	+	acrS	HEPCGN_16485	0.74	-0.2
2,045,599	+	acrS	HEPCGN_16485	0.89	-0.3
2,045,710	+	yhdU	HEPCGN_16490	0.19	+0.2
2,045,841	+				-0.7
2,045,842	-				+0.3
2,045,895	+				-0.8
2,045,898	-				-0.3
2,045,928	+				-0.3
2,045,972	-				+0.7
2,046,080	+	yhdJ	HEPCGN_16495	0.16	+0.6
2,046,081	-	yhdJ	HEPCGN_16495	0.16	+0.1
2,046,144	+	yhdJ	HEPCGN_16495	0.23	+1.4
2,046,144	+	yhdJ	HEPCGN_16495	0.23	+0.2
2,046,144	+	yhdJ	HEPCGN_16495	0.23	+0.2
2,046,145	-	yhdJ	HEPCGN_16495	0.23	+0.5
2,046,443	+	yhdJ	HEPCGN_16495	0.57	+0.8
2,046,443	+	yhdJ	HEPCGN_16495	0.57	-1.1
2,046,444	-	yhdJ	HEPCGN_16495	0.57	+0.1
2,046,489	-	yhdJ	HEPCGN_16495	0.62	-0.5
2,046,489	-	yhdJ	HEPCGN_16495	0.62	-0.2
2,046,543	+	yhdJ	HEPCGN_16495	0.68	-0.6
2,046,576	-	yhdJ	HEPCGN_16495	0.72	+1.2
2,046,576	-	yhdJ	HEPCGN_16495	0.72	+0.3