Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03211

Experiment: T6 MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T6 MOI1
3,349,961	-				-0.5
3,349,984	-				-0.5
3,350,018	+				+0.7
3,350,019	-				-0.1
3,350,019	-				-0.2
3,350,031	+				-0.1
3,350,031	+				+0.3
3,350,031	+				+0.3
3,350,031	+				-0.0
3,350,031	+				-0.3
3,350,031	+				+0.2
3,350,031	+				-0.5
3,350,031	+				+1.2
3,350,031	+				-0.3
3,350,032	-				-0.2
3,350,032	-				-1.4
3,350,032	-				-0.1
3,350,032	-				+0.4
3,350,032	-				-1.0
3,350,032	-				-0.5
3,350,117	+				-0.9
3,350,118	-				+0.0
3,350,208	+				-0.7
3,350,208	+				-0.2
3,350,208	+				+0.7
3,350,209	-				-0.2
3,350,209	-				-0.0
3,350,209	-				-1.2
3,350,209	-				-1.3
3,350,209	-				+0.0
3,350,209	-				+0.4
3,350,303	-		OHPLBJKB_03210	0.21	-0.1
3,350,318	-		OHPLBJKB_03210	0.24	-0.6
3,350,318	-		OHPLBJKB_03210	0.24	-1.7
3,350,340	-		OHPLBJKB_03210	0.27	-1.0
3,350,369	-		OHPLBJKB_03210	0.31	+0.1
3,350,400	+		OHPLBJKB_03210	0.36	-0.3
3,350,400	+		OHPLBJKB_03210	0.36	-0.3
3,350,419	+		OHPLBJKB_03210	0.39	+0.5
3,350,419	+		OHPLBJKB_03210	0.39	-0.8
3,350,420	-		OHPLBJKB_03210	0.39	-0.3
3,350,420	-		OHPLBJKB_03210	0.39	-0.1
3,350,420	-		OHPLBJKB_03210	0.39	+0.0
3,350,474	+		OHPLBJKB_03210	0.48	-0.2
3,350,476	+		OHPLBJKB_03210	0.48	+1.6
3,350,476	+		OHPLBJKB_03210	0.48	-1.9
3,350,476	+		OHPLBJKB_03210	0.48	-0.8
3,350,477	-		OHPLBJKB_03210	0.48	-1.5
3,350,477	-		OHPLBJKB_03210	0.48	+0.4
3,350,490	-		OHPLBJKB_03210	0.50	-0.4
3,350,534	+		OHPLBJKB_03210	0.57	-0.7
3,350,534	+		OHPLBJKB_03210	0.57	-0.6
3,350,534	+		OHPLBJKB_03210	0.57	-1.3
3,350,534	+		OHPLBJKB_03210	0.57	-0.6
3,350,538	-		OHPLBJKB_03210	0.58	-0.3
3,350,538	-		OHPLBJKB_03210	0.58	+0.6
3,350,547	-		OHPLBJKB_03210	0.59	-0.6
3,350,547	-		OHPLBJKB_03210	0.59	-1.2
3,350,549	+		OHPLBJKB_03210	0.59	-0.5
3,350,584	-		OHPLBJKB_03210	0.65	+0.3
3,350,656	+		OHPLBJKB_03210	0.76	-0.5
3,350,667	+		OHPLBJKB_03210	0.77	+0.0
3,350,668	-		OHPLBJKB_03210	0.78	+0.3
3,350,751	-				+0.1
3,350,812	+				-0.1
3,350,812	+				-1.8
3,350,812	+				+0.1
3,350,813	-				-0.6
3,350,846	-				+0.1
3,350,859	+				-0.3
3,350,859	+				+1.5
3,350,863	+				-1.1
3,350,868	+				+0.3
3,350,880	-				+0.5
3,350,882	+				-0.6
3,350,882	+				+0.1
3,350,882	+				-1.2
3,350,882	+				-0.7
3,350,882	+				+0.1
3,350,883	-				+0.2
3,350,903	-				+0.4
3,350,903	-				+0.1
3,350,949	+				+0.3
3,350,949	+				-0.0
3,350,949	+				+0.1
3,350,949	+				+0.1
3,350,950	-				+0.4
3,350,950	-				-0.7
3,350,950	-				-0.4
3,350,954	-				+0.1
3,350,954	-				-0.7
3,350,954	-				+0.6
3,350,954	-				-1.4
3,350,975	-				-1.2
3,351,013	-				-0.9
3,351,079	-		OHPLBJKB_03211	0.10	-1.2
3,351,081	+		OHPLBJKB_03211	0.11	-0.1
3,351,190	+		OHPLBJKB_03211	0.20	-0.3
3,351,205	+		OHPLBJKB_03211	0.21	-1.2
3,351,234	-		OHPLBJKB_03211	0.23	-0.2
3,351,254	+		OHPLBJKB_03211	0.25	-3.0
3,351,254	+		OHPLBJKB_03211	0.25	+0.3
3,351,255	-		OHPLBJKB_03211	0.25	-0.8
3,351,266	+		OHPLBJKB_03211	0.26	+0.5
3,351,267	-		OHPLBJKB_03211	0.26	+1.1
3,351,267	-		OHPLBJKB_03211	0.26	+0.1
3,351,267	-		OHPLBJKB_03211	0.26	+0.9
3,351,267	-		OHPLBJKB_03211	0.26	-1.0
3,351,362	+		OHPLBJKB_03211	0.34	-0.7
3,351,362	+		OHPLBJKB_03211	0.34	-0.3
3,351,363	-		OHPLBJKB_03211	0.34	-0.7
3,351,363	-		OHPLBJKB_03211	0.34	-0.2
3,351,370	+		OHPLBJKB_03211	0.35	-0.0
3,351,371	-		OHPLBJKB_03211	0.35	-0.1
3,351,380	+		OHPLBJKB_03211	0.36	-0.1
3,351,381	-		OHPLBJKB_03211	0.36	+0.3
3,351,470	+		OHPLBJKB_03211	0.43	+0.5
3,351,471	-		OHPLBJKB_03211	0.43	-0.1
3,351,509	-		OHPLBJKB_03211	0.46	-1.2
3,351,538	-		OHPLBJKB_03211	0.49	-0.3
3,351,590	+		OHPLBJKB_03211	0.53	-0.2
3,351,590	+		OHPLBJKB_03211	0.53	+0.4
3,351,590	+		OHPLBJKB_03211	0.53	-0.8
3,351,590	+		OHPLBJKB_03211	0.53	-0.1
3,351,590	+		OHPLBJKB_03211	0.53	-0.7
3,351,591	-		OHPLBJKB_03211	0.53	+0.1
3,351,591	-		OHPLBJKB_03211	0.53	+0.2
3,351,710	-		OHPLBJKB_03211	0.63	+0.1
3,351,748	+		OHPLBJKB_03211	0.66	+0.3
3,351,772	+		OHPLBJKB_03211	0.69	-0.1
3,351,773	-		OHPLBJKB_03211	0.69	+0.9
3,351,824	-		OHPLBJKB_03211	0.73	+0.6
3,351,921	+		OHPLBJKB_03211	0.81	-0.4
3,351,928	-		OHPLBJKB_03211	0.82	-0.2
3,351,928	-		OHPLBJKB_03211	0.82	+0.4
3,351,980	-		OHPLBJKB_03211	0.86	+0.1
3,352,029	+				-0.1
3,352,032	+				+0.4
3,352,032	+				+0.5
3,352,035	+				-0.2
3,352,035	+				-0.7
3,352,035	+				-0.1
3,352,036	-				-0.7
3,352,036	-				+0.4
3,352,071	+				+0.7
3,352,072	-				-1.3
3,352,100	-				-1.0
3,352,175	+				-0.1
3,352,176	-				+0.1
3,352,220	+				-0.5
3,352,278	-				-1.3
3,352,398	+				-0.6
3,352,398	+				-0.3
3,352,398	+				-0.1
3,352,398	+				-0.4
3,352,398	+				+0.2
3,352,398	+				-0.7
3,352,398	+				+0.4
3,352,398	+				+1.3
3,352,398	+				-0.3
3,352,398	+				-0.1
3,352,398	+				+0.9
3,352,398	+				+0.1
3,352,398	+				-0.1
3,352,398	+				-0.0
3,352,398	+				+0.7
3,352,410	-				+0.7
3,352,628	+		OHPLBJKB_03212	0.15	-1.2
3,352,639	-		OHPLBJKB_03212	0.15	-0.9
3,352,639	-		OHPLBJKB_03212	0.15	-2.0
3,352,868	+		OHPLBJKB_03212	0.22	-2.2
3,352,868	+		OHPLBJKB_03212	0.22	-0.4
3,352,871	+		OHPLBJKB_03212	0.22	+0.2
3,352,872	-		OHPLBJKB_03212	0.22	-1.1
3,352,992	+		OHPLBJKB_03212	0.26	+0.3
3,352,992	+		OHPLBJKB_03212	0.26	+0.0
3,352,992	+		OHPLBJKB_03212	0.26	-0.4
3,352,993	-		OHPLBJKB_03212	0.26	-0.6
3,352,993	-		OHPLBJKB_03212	0.26	-0.6