Experiment: T6 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00696 and OHPLBJKB_00697 are separated by 190 nucleotides OHPLBJKB_00697 and OHPLBJKB_00698 are separated by 39 nucleotides
OHPLBJKB_00696: OHPLBJKB_00696 - putative oxidoreductase YghA, at 715,524 to 716,408
_00696
OHPLBJKB_00697: OHPLBJKB_00697 - hypothetical protein, at 716,599 to 717,093
_00697
OHPLBJKB_00698: OHPLBJKB_00698 - L-glyceraldehyde 3-phosphate reductase, at 717,133 to 718,173
_00698
Position (kb) 716
717
718 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.674 kb on - strand, within OHPLBJKB_00696 at 715.674 kb on - strand, within OHPLBJKB_00696 at 715.733 kb on + strand, within OHPLBJKB_00696 at 715.733 kb on + strand, within OHPLBJKB_00696 at 715.734 kb on - strand, within OHPLBJKB_00696 at 715.783 kb on + strand, within OHPLBJKB_00696 at 715.783 kb on + strand, within OHPLBJKB_00696 at 715.814 kb on - strand, within OHPLBJKB_00696 at 715.821 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 716.015 kb on + strand, within OHPLBJKB_00696 at 716.016 kb on - strand, within OHPLBJKB_00696 at 716.170 kb on + strand, within OHPLBJKB_00696 at 716.170 kb on + strand, within OHPLBJKB_00696 at 716.226 kb on + strand, within OHPLBJKB_00696 at 716.227 kb on - strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.288 kb on - strand, within OHPLBJKB_00696 at 716.288 kb on - strand, within OHPLBJKB_00696 at 716.288 kb on - strand, within OHPLBJKB_00696 at 716.374 kb on + strand at 716.374 kb on + strand at 716.375 kb on - strand at 716.375 kb on - strand at 716.375 kb on - strand at 716.375 kb on - strand at 716.378 kb on - strand at 716.378 kb on - strand at 716.397 kb on + strand at 716.398 kb on - strand at 716.500 kb on + strand at 716.520 kb on + strand at 716.520 kb on + strand at 716.520 kb on + strand at 716.520 kb on + strand at 716.521 kb on - strand at 716.521 kb on - strand at 716.521 kb on - strand at 716.521 kb on - strand at 716.522 kb on + strand at 716.523 kb on - strand at 716.565 kb on - strand at 716.565 kb on - strand at 716.565 kb on - strand at 716.565 kb on - strand at 716.579 kb on + strand at 716.580 kb on - strand at 716.583 kb on + strand at 716.584 kb on - strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.599 kb on - strand at 716.599 kb on - strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.657 kb on - strand, within OHPLBJKB_00697 at 716.731 kb on - strand, within OHPLBJKB_00697 at 716.731 kb on - strand, within OHPLBJKB_00697 at 716.924 kb on + strand, within OHPLBJKB_00697 at 716.924 kb on + strand, within OHPLBJKB_00697 at 716.925 kb on - strand, within OHPLBJKB_00697 at 716.925 kb on - strand, within OHPLBJKB_00697 at 716.925 kb on - strand, within OHPLBJKB_00697 at 717.013 kb on + strand, within OHPLBJKB_00697 at 717.013 kb on + strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.062 kb on - strand at 717.085 kb on - strand at 717.085 kb on - strand at 717.127 kb on - strand at 717.127 kb on - strand at 717.139 kb on - strand at 717.139 kb on - strand at 717.213 kb on + strand at 717.213 kb on + strand at 717.251 kb on - strand, within OHPLBJKB_00698 at 717.426 kb on + strand, within OHPLBJKB_00698 at 717.426 kb on + strand, within OHPLBJKB_00698 at 717.427 kb on - strand, within OHPLBJKB_00698 at 717.508 kb on - strand, within OHPLBJKB_00698 at 717.508 kb on - strand, within OHPLBJKB_00698 at 717.517 kb on - strand, within OHPLBJKB_00698 at 717.517 kb on - strand, within OHPLBJKB_00698 at 717.562 kb on - strand, within OHPLBJKB_00698 at 717.581 kb on - strand, within OHPLBJKB_00698 at 717.604 kb on + strand, within OHPLBJKB_00698 at 717.605 kb on - strand, within OHPLBJKB_00698 at 717.683 kb on + strand, within OHPLBJKB_00698 at 717.683 kb on + strand, within OHPLBJKB_00698 at 717.684 kb on - strand, within OHPLBJKB_00698 at 717.684 kb on - strand, within OHPLBJKB_00698 at 717.684 kb on - strand, within OHPLBJKB_00698 at 717.782 kb on + strand, within OHPLBJKB_00698 at 717.782 kb on + strand, within OHPLBJKB_00698 at 717.783 kb on - strand, within OHPLBJKB_00698 at 717.783 kb on - strand, within OHPLBJKB_00698 at 717.783 kb on - strand, within OHPLBJKB_00698 at 717.830 kb on + strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.834 kb on + strand, within OHPLBJKB_00698 at 717.834 kb on + strand, within OHPLBJKB_00698 at 717.835 kb on - strand, within OHPLBJKB_00698 at 717.835 kb on - strand, within OHPLBJKB_00698 at 717.870 kb on + strand, within OHPLBJKB_00698 at 717.871 kb on - strand, within OHPLBJKB_00698 at 717.889 kb on - strand, within OHPLBJKB_00698 at 717.894 kb on + strand, within OHPLBJKB_00698 at 717.895 kb on - strand, within OHPLBJKB_00698 at 717.895 kb on - strand, within OHPLBJKB_00698 at 717.988 kb on + strand, within OHPLBJKB_00698 at 718.023 kb on + strand, within OHPLBJKB_00698 at 718.078 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction T6 MOI10 remove 715,603 + -0.2 715,603 + +0.3 715,603 + -0.6 715,603 + -0.4 715,603 + -0.6 715,603 + +0.4 715,603 + +0.3 715,604 - -0.8 715,604 - -1.0 715,604 - +0.1 715,604 - -0.2 715,604 - +0.3 715,604 - +0.2 715,604 - +0.1 715,604 - -0.3 715,605 + +1.4 715,605 + -1.3 715,605 + -0.5 715,605 + +0.9 715,605 + +0.1 715,605 + -0.0 715,605 + -0.0 715,605 + -1.0 715,605 + +0.3 715,605 + -0.5 715,605 + -0.8 715,605 + -0.8 715,606 - -1.7 715,606 - +0.1 715,606 - -0.6 715,606 - -0.9 715,606 - +0.8 715,606 - +0.4 715,606 - -0.7 715,606 - -0.0 715,606 - -0.7 715,606 - -0.1 715,674 - OHPLBJKB_00696 0.17 +0.8 715,674 - OHPLBJKB_00696 0.17 -0.3 715,733 + OHPLBJKB_00696 0.24 -0.7 715,733 + OHPLBJKB_00696 0.24 -0.4 715,734 - OHPLBJKB_00696 0.24 +0.2 715,783 + OHPLBJKB_00696 0.29 -0.1 715,783 + OHPLBJKB_00696 0.29 +0.2 715,814 - OHPLBJKB_00696 0.33 -2.6 715,821 + OHPLBJKB_00696 0.34 -0.4 715,868 + OHPLBJKB_00696 0.39 -0.3 715,868 + OHPLBJKB_00696 0.39 +0.6 715,868 + OHPLBJKB_00696 0.39 -1.4 715,868 + OHPLBJKB_00696 0.39 -0.4 715,868 + OHPLBJKB_00696 0.39 -0.2 715,868 + OHPLBJKB_00696 0.39 -1.4 715,869 - OHPLBJKB_00696 0.39 -0.3 715,869 - OHPLBJKB_00696 0.39 +0.0 715,869 - OHPLBJKB_00696 0.39 +0.6 715,869 - OHPLBJKB_00696 0.39 +0.3 715,869 - OHPLBJKB_00696 0.39 +0.2 716,015 + OHPLBJKB_00696 0.55 +0.6 716,016 - OHPLBJKB_00696 0.56 -0.2 716,170 + OHPLBJKB_00696 0.73 -2.0 716,170 + OHPLBJKB_00696 0.73 -0.2 716,226 + OHPLBJKB_00696 0.79 -0.3 716,227 - OHPLBJKB_00696 0.79 -0.1 716,287 + OHPLBJKB_00696 0.86 -0.8 716,287 + OHPLBJKB_00696 0.86 -0.0 716,287 + OHPLBJKB_00696 0.86 +0.3 716,287 + OHPLBJKB_00696 0.86 +0.5 716,288 - OHPLBJKB_00696 0.86 +0.8 716,288 - OHPLBJKB_00696 0.86 -0.2 716,288 - OHPLBJKB_00696 0.86 -1.0 716,374 + -0.0 716,374 + -1.4 716,375 - -0.5 716,375 - -0.2 716,375 - -0.1 716,375 - -0.5 716,378 - +0.6 716,378 - -0.5 716,397 + +0.4 716,398 - +0.8 716,500 + -0.7 716,520 + -0.4 716,520 + -1.0 716,520 + -0.2 716,520 + +0.7 716,521 - +0.1 716,521 - -0.9 716,521 - +0.6 716,521 - +0.7 716,522 + -1.2 716,523 - +0.9 716,565 - -0.0 716,565 - -0.5 716,565 - -1.0 716,565 - +0.1 716,579 + -0.4 716,580 - +1.5 716,583 + -0.1 716,584 - -0.8 716,598 + +0.4 716,598 + -0.5 716,598 + +2.9 716,598 + +0.0 716,598 + +0.2 716,599 - +0.2 716,599 - +0.0 716,626 + -0.3 716,626 + +0.1 716,626 + -1.2 716,626 + +0.4 716,626 + -0.3 716,626 + +0.9 716,626 + -0.0 716,627 - -0.7 716,627 - +1.2 716,627 - +0.4 716,627 - +0.3 716,627 - -0.0 716,627 - +0.1 716,627 - -0.4 716,627 - +1.7 716,657 - OHPLBJKB_00697 0.12 +0.6 716,731 - OHPLBJKB_00697 0.27 -0.5 716,731 - OHPLBJKB_00697 0.27 -0.2 716,924 + OHPLBJKB_00697 0.66 +0.8 716,924 + OHPLBJKB_00697 0.66 +0.4 716,925 - OHPLBJKB_00697 0.66 +1.0 716,925 - OHPLBJKB_00697 0.66 -1.7 716,925 - OHPLBJKB_00697 0.66 -0.4 717,013 + OHPLBJKB_00697 0.84 -0.5 717,013 + OHPLBJKB_00697 0.84 +2.4 717,014 - OHPLBJKB_00697 0.84 +0.4 717,014 - OHPLBJKB_00697 0.84 -0.0 717,014 - OHPLBJKB_00697 0.84 -0.2 717,014 - OHPLBJKB_00697 0.84 +0.3 717,014 - OHPLBJKB_00697 0.84 +0.3 717,014 - OHPLBJKB_00697 0.84 +0.2 717,062 - +1.1 717,085 - +1.4 717,085 - -0.2 717,127 - +0.3 717,127 - +0.6 717,139 - -0.4 717,139 - -0.2 717,213 + +0.2 717,213 + -0.4 717,251 - OHPLBJKB_00698 0.11 +0.2 717,426 + OHPLBJKB_00698 0.28 -0.7 717,426 + OHPLBJKB_00698 0.28 -0.1 717,427 - OHPLBJKB_00698 0.28 +0.7 717,508 - OHPLBJKB_00698 0.36 +0.7 717,508 - OHPLBJKB_00698 0.36 -0.5 717,517 - OHPLBJKB_00698 0.37 +0.3 717,517 - OHPLBJKB_00698 0.37 -1.8 717,562 - OHPLBJKB_00698 0.41 -0.5 717,581 - OHPLBJKB_00698 0.43 +0.3 717,604 + OHPLBJKB_00698 0.45 +1.4 717,605 - OHPLBJKB_00698 0.45 -0.3 717,683 + OHPLBJKB_00698 0.53 -0.6 717,683 + OHPLBJKB_00698 0.53 -0.0 717,684 - OHPLBJKB_00698 0.53 -0.5 717,684 - OHPLBJKB_00698 0.53 -0.2 717,684 - OHPLBJKB_00698 0.53 -0.4 717,782 + OHPLBJKB_00698 0.62 -0.3 717,782 + OHPLBJKB_00698 0.62 +1.3 717,783 - OHPLBJKB_00698 0.62 +0.1 717,783 - OHPLBJKB_00698 0.62 +0.1 717,783 - OHPLBJKB_00698 0.62 +0.2 717,830 + OHPLBJKB_00698 0.67 -0.7 717,831 - OHPLBJKB_00698 0.67 +0.6 717,831 - OHPLBJKB_00698 0.67 -0.7 717,831 - OHPLBJKB_00698 0.67 +0.0 717,831 - OHPLBJKB_00698 0.67 +0.1 717,834 + OHPLBJKB_00698 0.67 +0.1 717,834 + OHPLBJKB_00698 0.67 -0.0 717,835 - OHPLBJKB_00698 0.67 +0.2 717,835 - OHPLBJKB_00698 0.67 +0.1 717,870 + OHPLBJKB_00698 0.71 -0.6 717,871 - OHPLBJKB_00698 0.71 -0.1 717,889 - OHPLBJKB_00698 0.73 +0.4 717,894 + OHPLBJKB_00698 0.73 +0.7 717,895 - OHPLBJKB_00698 0.73 +1.0 717,895 - OHPLBJKB_00698 0.73 +0.5 717,988 + OHPLBJKB_00698 0.82 -0.4 718,023 + OHPLBJKB_00698 0.85 -0.1 718,078 + -0.8
Or see this region's nucleotide sequence