Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01023

Experiment: T5 MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_01022 and OHPLBJKB_01023 are separated by 127 nucleotidesOHPLBJKB_01023 and OHPLBJKB_01024 overlap by 4 nucleotides OHPLBJKB_01022: OHPLBJKB_01022 - Carbamoyltransferase HypF, at 1,056,058 to 1,058,310 _01022 OHPLBJKB_01023: OHPLBJKB_01023 - Nitric oxide reductase FlRd-NAD(+) reductase, at 1,058,438 to 1,059,571 _01023 OHPLBJKB_01024: OHPLBJKB_01024 - Anaerobic nitric oxide reductase flavorubredoxin, at 1,059,568 to 1,061,007 _01024 Position (kb) 1058 1059 1060Strain fitness (log2 ratio) -2 -1 0 1 2at 1057.622 kb on - strand, within OHPLBJKB_01022at 1057.622 kb on - strand, within OHPLBJKB_01022at 1057.747 kb on + strand, within OHPLBJKB_01022at 1057.747 kb on + strand, within OHPLBJKB_01022at 1057.748 kb on - strand, within OHPLBJKB_01022at 1057.815 kb on + strand, within OHPLBJKB_01022at 1057.892 kb on + strand, within OHPLBJKB_01022at 1057.892 kb on + strand, within OHPLBJKB_01022at 1057.893 kb on - strand, within OHPLBJKB_01022at 1057.893 kb on - strand, within OHPLBJKB_01022at 1057.897 kb on + strand, within OHPLBJKB_01022at 1058.135 kb on + strandat 1058.135 kb on + strandat 1058.136 kb on - strandat 1058.136 kb on - strandat 1058.139 kb on + strandat 1058.157 kb on + strandat 1058.188 kb on + strandat 1058.366 kb on + strandat 1058.366 kb on + strandat 1058.366 kb on + strandat 1058.391 kb on + strandat 1058.422 kb on - strandat 1058.430 kb on + strandat 1058.431 kb on - strandat 1058.439 kb on + strandat 1058.439 kb on + strandat 1058.439 kb on + strandat 1058.440 kb on - strandat 1058.440 kb on - strandat 1058.440 kb on - strandat 1058.440 kb on - strandat 1058.560 kb on + strand, within OHPLBJKB_01023at 1058.560 kb on + strand, within OHPLBJKB_01023at 1058.561 kb on - strand, within OHPLBJKB_01023at 1058.561 kb on - strand, within OHPLBJKB_01023at 1058.573 kb on + strand, within OHPLBJKB_01023at 1058.573 kb on + strand, within OHPLBJKB_01023at 1058.574 kb on - strand, within OHPLBJKB_01023at 1058.574 kb on - strand, within OHPLBJKB_01023at 1058.574 kb on - strand, within OHPLBJKB_01023at 1058.612 kb on + strand, within OHPLBJKB_01023at 1058.612 kb on + strand, within OHPLBJKB_01023at 1058.612 kb on + strand, within OHPLBJKB_01023at 1058.613 kb on - strand, within OHPLBJKB_01023at 1058.665 kb on + strand, within OHPLBJKB_01023at 1058.666 kb on - strand, within OHPLBJKB_01023at 1058.666 kb on - strand, within OHPLBJKB_01023at 1058.702 kb on - strand, within OHPLBJKB_01023at 1058.702 kb on - strand, within OHPLBJKB_01023at 1058.729 kb on + strand, within OHPLBJKB_01023at 1058.730 kb on - strand, within OHPLBJKB_01023at 1058.730 kb on - strand, within OHPLBJKB_01023at 1058.766 kb on + strand, within OHPLBJKB_01023at 1058.767 kb on - strand, within OHPLBJKB_01023at 1058.776 kb on + strand, within OHPLBJKB_01023at 1058.777 kb on - strand, within OHPLBJKB_01023at 1058.777 kb on - strand, within OHPLBJKB_01023at 1058.779 kb on + strand, within OHPLBJKB_01023at 1058.780 kb on - strand, within OHPLBJKB_01023at 1058.793 kb on + strand, within OHPLBJKB_01023at 1058.793 kb on + strand, within OHPLBJKB_01023at 1058.794 kb on - strand, within OHPLBJKB_01023at 1058.794 kb on - strand, within OHPLBJKB_01023at 1058.794 kb on - strand, within OHPLBJKB_01023at 1058.794 kb on - strand, within OHPLBJKB_01023at 1058.794 kb on - strand, within OHPLBJKB_01023at 1058.797 kb on + strand, within OHPLBJKB_01023at 1058.798 kb on - strand, within OHPLBJKB_01023at 1058.798 kb on - strand, within OHPLBJKB_01023at 1058.879 kb on + strand, within OHPLBJKB_01023at 1058.954 kb on + strand, within OHPLBJKB_01023at 1058.954 kb on + strand, within OHPLBJKB_01023at 1059.017 kb on + strand, within OHPLBJKB_01023at 1059.017 kb on + strand, within OHPLBJKB_01023at 1059.018 kb on - strand, within OHPLBJKB_01023at 1059.018 kb on - strand, within OHPLBJKB_01023at 1059.046 kb on + strand, within OHPLBJKB_01023at 1059.046 kb on + strand, within OHPLBJKB_01023at 1059.047 kb on - strand, within OHPLBJKB_01023at 1059.047 kb on - strand, within OHPLBJKB_01023at 1059.181 kb on - strand, within OHPLBJKB_01023at 1059.193 kb on + strand, within OHPLBJKB_01023at 1059.193 kb on + strand, within OHPLBJKB_01023at 1059.194 kb on - strand, within OHPLBJKB_01023at 1059.197 kb on + strand, within OHPLBJKB_01023at 1059.197 kb on + strand, within OHPLBJKB_01023at 1059.198 kb on - strand, within OHPLBJKB_01023at 1059.198 kb on - strand, within OHPLBJKB_01023at 1059.209 kb on + strand, within OHPLBJKB_01023at 1059.209 kb on + strand, within OHPLBJKB_01023at 1059.209 kb on + strand, within OHPLBJKB_01023at 1059.209 kb on + strand, within OHPLBJKB_01023at 1059.210 kb on - strand, within OHPLBJKB_01023at 1059.210 kb on - strand, within OHPLBJKB_01023at 1059.210 kb on - strand, within OHPLBJKB_01023at 1059.210 kb on - strand, within OHPLBJKB_01023at 1059.210 kb on - strand, within OHPLBJKB_01023at 1059.210 kb on - strand, within OHPLBJKB_01023at 1059.261 kb on - strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.263 kb on + strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.264 kb on - strand, within OHPLBJKB_01023at 1059.273 kb on + strand, within OHPLBJKB_01023at 1059.274 kb on - strand, within OHPLBJKB_01023at 1059.358 kb on + strand, within OHPLBJKB_01023at 1059.358 kb on + strand, within OHPLBJKB_01023at 1059.359 kb on - strand, within OHPLBJKB_01023at 1059.424 kb on + strand, within OHPLBJKB_01023at 1059.424 kb on + strand, within OHPLBJKB_01023at 1059.425 kb on - strand, within OHPLBJKB_01023at 1059.450 kb on + strand, within OHPLBJKB_01023at 1059.450 kb on + strand, within OHPLBJKB_01023at 1059.450 kb on + strand, within OHPLBJKB_01023at 1059.451 kb on - strand, within OHPLBJKB_01023at 1059.451 kb on - strand, within OHPLBJKB_01023at 1059.451 kb on - strand, within OHPLBJKB_01023at 1059.451 kb on - strand, within OHPLBJKB_01023at 1059.451 kb on - strand, within OHPLBJKB_01023at 1059.490 kb on + strandat 1059.491 kb on - strandat 1059.491 kb on - strandat 1059.511 kb on + strandat 1059.777 kb on + strand, within OHPLBJKB_01024at 1059.786 kb on + strand, within OHPLBJKB_01024at 1059.856 kb on + strand, within OHPLBJKB_01024at 1059.856 kb on + strand, within OHPLBJKB_01024at 1059.856 kb on + strand, within OHPLBJKB_01024at 1059.857 kb on - strand, within OHPLBJKB_01024at 1059.857 kb on - strand, within OHPLBJKB_01024at 1060.010 kb on - strand, within OHPLBJKB_01024at 1060.059 kb on + strand, within OHPLBJKB_01024at 1060.059 kb on + strand, within OHPLBJKB_01024at 1060.107 kb on + strand, within OHPLBJKB_01024at 1060.125 kb on + strand, within OHPLBJKB_01024at 1060.219 kb on - strand, within OHPLBJKB_01024at 1060.262 kb on + strand, within OHPLBJKB_01024at 1060.284 kb on - strand, within OHPLBJKB_01024at 1060.318 kb on + strand, within OHPLBJKB_01024at 1060.339 kb on + strand, within OHPLBJKB_01024at 1060.340 kb on - strand, within OHPLBJKB_01024at 1060.340 kb on - strand, within OHPLBJKB_01024at 1060.354 kb on + strand, within OHPLBJKB_01024at 1060.355 kb on - strand, within OHPLBJKB_01024at 1060.359 kb on + strand, within OHPLBJKB_01024at 1060.359 kb on + strand, within OHPLBJKB_01024at 1060.360 kb on - strand, within OHPLBJKB_01024at 1060.360 kb on - strand, within OHPLBJKB_01024at 1060.360 kb on - strand, within OHPLBJKB_01024at 1060.360 kb on - strand, within OHPLBJKB_01024at 1060.390 kb on + strand, within OHPLBJKB_01024at 1060.391 kb on - strand, within OHPLBJKB_01024at 1060.424 kb on + strand, within OHPLBJKB_01024at 1060.424 kb on + strand, within OHPLBJKB_01024at 1060.425 kb on - strand, within OHPLBJKB_01024at 1060.425 kb on - strand, within OHPLBJKB_01024at 1060.428 kb on - strand, within OHPLBJKB_01024at 1060.493 kb on + strand, within OHPLBJKB_01024at 1060.493 kb on + strand, within OHPLBJKB_01024at 1060.544 kb on + strand, within OHPLBJKB_01024at 1060.544 kb on + strand, within OHPLBJKB_01024at 1060.544 kb on + strand, within OHPLBJKB_01024at 1060.545 kb on - strand, within OHPLBJKB_01024at 1060.545 kb on - strand, within OHPLBJKB_01024at 1060.545 kb on - strand, within OHPLBJKB_01024at 1060.545 kb on - strand, within OHPLBJKB_01024

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Per-strain Table

Position Strand Gene LocusTag Fraction T5 MOI1
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1,057,622 - OHPLBJKB_01022 0.69 -0.1
1,057,622 - OHPLBJKB_01022 0.69 -0.2
1,057,747 + OHPLBJKB_01022 0.75 -0.7
1,057,747 + OHPLBJKB_01022 0.75 +0.4
1,057,748 - OHPLBJKB_01022 0.75 +0.6
1,057,815 + OHPLBJKB_01022 0.78 -0.4
1,057,892 + OHPLBJKB_01022 0.81 +0.1
1,057,892 + OHPLBJKB_01022 0.81 +0.1
1,057,893 - OHPLBJKB_01022 0.81 +1.3
1,057,893 - OHPLBJKB_01022 0.81 +0.2
1,057,897 + OHPLBJKB_01022 0.82 +0.3
1,058,135 + -0.1
1,058,135 + -0.7
1,058,136 - +0.2
1,058,136 - +0.6
1,058,139 + +0.3
1,058,157 + +0.5
1,058,188 + +0.3
1,058,366 + +0.2
1,058,366 + -1.2
1,058,366 + +0.2
1,058,391 + +0.3
1,058,422 - -0.4
1,058,430 + -0.1
1,058,431 - +0.9
1,058,439 + +0.5
1,058,439 + +0.9
1,058,439 + +0.1
1,058,440 - +0.2
1,058,440 - +0.3
1,058,440 - -0.2
1,058,440 - -1.4
1,058,560 + OHPLBJKB_01023 0.11 -0.7
1,058,560 + OHPLBJKB_01023 0.11 -1.0
1,058,561 - OHPLBJKB_01023 0.11 -1.8
1,058,561 - OHPLBJKB_01023 0.11 -0.1
1,058,573 + OHPLBJKB_01023 0.12 +0.3
1,058,573 + OHPLBJKB_01023 0.12 +0.4
1,058,574 - OHPLBJKB_01023 0.12 +0.0
1,058,574 - OHPLBJKB_01023 0.12 -0.3
1,058,574 - OHPLBJKB_01023 0.12 +1.9
1,058,612 + OHPLBJKB_01023 0.15 -0.6
1,058,612 + OHPLBJKB_01023 0.15 -2.2
1,058,612 + OHPLBJKB_01023 0.15 +0.3
1,058,613 - OHPLBJKB_01023 0.15 -1.0
1,058,665 + OHPLBJKB_01023 0.20 +0.3
1,058,666 - OHPLBJKB_01023 0.20 -0.2
1,058,666 - OHPLBJKB_01023 0.20 -0.1
1,058,702 - OHPLBJKB_01023 0.23 -1.1
1,058,702 - OHPLBJKB_01023 0.23 -0.1
1,058,729 + OHPLBJKB_01023 0.26 -0.6
1,058,730 - OHPLBJKB_01023 0.26 -0.6
1,058,730 - OHPLBJKB_01023 0.26 -0.2
1,058,766 + OHPLBJKB_01023 0.29 -0.2
1,058,767 - OHPLBJKB_01023 0.29 +0.9
1,058,776 + OHPLBJKB_01023 0.30 -0.2
1,058,777 - OHPLBJKB_01023 0.30 +0.8
1,058,777 - OHPLBJKB_01023 0.30 -0.0
1,058,779 + OHPLBJKB_01023 0.30 -0.3
1,058,780 - OHPLBJKB_01023 0.30 +0.3
1,058,793 + OHPLBJKB_01023 0.31 +0.2
1,058,793 + OHPLBJKB_01023 0.31 +0.6
1,058,794 - OHPLBJKB_01023 0.31 -0.3
1,058,794 - OHPLBJKB_01023 0.31 +0.3
1,058,794 - OHPLBJKB_01023 0.31 +1.4
1,058,794 - OHPLBJKB_01023 0.31 -0.9
1,058,794 - OHPLBJKB_01023 0.31 -0.1
1,058,797 + OHPLBJKB_01023 0.32 -0.5
1,058,798 - OHPLBJKB_01023 0.32 +0.3
1,058,798 - OHPLBJKB_01023 0.32 -0.4
1,058,879 + OHPLBJKB_01023 0.39 +0.5
1,058,954 + OHPLBJKB_01023 0.46 -0.6
1,058,954 + OHPLBJKB_01023 0.46 +0.2
1,059,017 + OHPLBJKB_01023 0.51 +0.1
1,059,017 + OHPLBJKB_01023 0.51 +0.8
1,059,018 - OHPLBJKB_01023 0.51 +0.1
1,059,018 - OHPLBJKB_01023 0.51 -1.1
1,059,046 + OHPLBJKB_01023 0.54 +0.0
1,059,046 + OHPLBJKB_01023 0.54 -0.0
1,059,047 - OHPLBJKB_01023 0.54 -0.1
1,059,047 - OHPLBJKB_01023 0.54 +0.5
1,059,181 - OHPLBJKB_01023 0.66 -0.1
1,059,193 + OHPLBJKB_01023 0.67 +0.2
1,059,193 + OHPLBJKB_01023 0.67 +1.1
1,059,194 - OHPLBJKB_01023 0.67 -0.5
1,059,197 + OHPLBJKB_01023 0.67 -0.2
1,059,197 + OHPLBJKB_01023 0.67 -0.1
1,059,198 - OHPLBJKB_01023 0.67 -0.2
1,059,198 - OHPLBJKB_01023 0.67 +0.1
1,059,209 + OHPLBJKB_01023 0.68 -0.5
1,059,209 + OHPLBJKB_01023 0.68 -0.4
1,059,209 + OHPLBJKB_01023 0.68 +0.3
1,059,209 + OHPLBJKB_01023 0.68 -1.1
1,059,210 - OHPLBJKB_01023 0.68 -1.0
1,059,210 - OHPLBJKB_01023 0.68 -0.9
1,059,210 - OHPLBJKB_01023 0.68 -1.0
1,059,210 - OHPLBJKB_01023 0.68 -1.1
1,059,210 - OHPLBJKB_01023 0.68 +0.2
1,059,210 - OHPLBJKB_01023 0.68 +0.1
1,059,261 - OHPLBJKB_01023 0.73 -0.5
1,059,263 + OHPLBJKB_01023 0.73 -0.2
1,059,263 + OHPLBJKB_01023 0.73 -0.1
1,059,263 + OHPLBJKB_01023 0.73 -0.4
1,059,263 + OHPLBJKB_01023 0.73 +0.5
1,059,263 + OHPLBJKB_01023 0.73 +0.3
1,059,263 + OHPLBJKB_01023 0.73 -0.3
1,059,263 + OHPLBJKB_01023 0.73 +0.2
1,059,264 - OHPLBJKB_01023 0.73 -0.2
1,059,264 - OHPLBJKB_01023 0.73 -0.4
1,059,264 - OHPLBJKB_01023 0.73 -0.7
1,059,264 - OHPLBJKB_01023 0.73 -1.5
1,059,264 - OHPLBJKB_01023 0.73 +0.3
1,059,264 - OHPLBJKB_01023 0.73 -0.6
1,059,264 - OHPLBJKB_01023 0.73 -0.4
1,059,273 + OHPLBJKB_01023 0.74 -0.5
1,059,274 - OHPLBJKB_01023 0.74 +0.4
1,059,358 + OHPLBJKB_01023 0.81 -0.6
1,059,358 + OHPLBJKB_01023 0.81 +0.5
1,059,359 - OHPLBJKB_01023 0.81 +1.1
1,059,424 + OHPLBJKB_01023 0.87 -0.1
1,059,424 + OHPLBJKB_01023 0.87 -0.1
1,059,425 - OHPLBJKB_01023 0.87 +0.3
1,059,450 + OHPLBJKB_01023 0.89 -1.0
1,059,450 + OHPLBJKB_01023 0.89 +0.2
1,059,450 + OHPLBJKB_01023 0.89 -0.8
1,059,451 - OHPLBJKB_01023 0.89 -0.4
1,059,451 - OHPLBJKB_01023 0.89 +0.7
1,059,451 - OHPLBJKB_01023 0.89 +0.7
1,059,451 - OHPLBJKB_01023 0.89 +0.0
1,059,451 - OHPLBJKB_01023 0.89 +1.0
1,059,490 + -0.2
1,059,491 - -0.0
1,059,491 - -0.1
1,059,511 + +0.1
1,059,777 + OHPLBJKB_01024 0.15 -0.9
1,059,786 + OHPLBJKB_01024 0.15 -1.8
1,059,856 + OHPLBJKB_01024 0.20 +1.0
1,059,856 + OHPLBJKB_01024 0.20 +0.3
1,059,856 + OHPLBJKB_01024 0.20 -0.4
1,059,857 - OHPLBJKB_01024 0.20 -0.1
1,059,857 - OHPLBJKB_01024 0.20 +0.1
1,060,010 - OHPLBJKB_01024 0.31 -0.4
1,060,059 + OHPLBJKB_01024 0.34 -0.3
1,060,059 + OHPLBJKB_01024 0.34 +0.3
1,060,107 + OHPLBJKB_01024 0.37 -0.0
1,060,125 + OHPLBJKB_01024 0.39 +0.5
1,060,219 - OHPLBJKB_01024 0.45 +1.0
1,060,262 + OHPLBJKB_01024 0.48 +0.4
1,060,284 - OHPLBJKB_01024 0.50 -0.5
1,060,318 + OHPLBJKB_01024 0.52 +0.1
1,060,339 + OHPLBJKB_01024 0.54 +0.4
1,060,340 - OHPLBJKB_01024 0.54 +0.6
1,060,340 - OHPLBJKB_01024 0.54 -0.1
1,060,354 + OHPLBJKB_01024 0.55 -0.6
1,060,355 - OHPLBJKB_01024 0.55 +0.1
1,060,359 + OHPLBJKB_01024 0.55 -0.4
1,060,359 + OHPLBJKB_01024 0.55 +0.2
1,060,360 - OHPLBJKB_01024 0.55 +0.6
1,060,360 - OHPLBJKB_01024 0.55 -1.8
1,060,360 - OHPLBJKB_01024 0.55 +0.2
1,060,360 - OHPLBJKB_01024 0.55 +0.4
1,060,390 + OHPLBJKB_01024 0.57 -0.1
1,060,391 - OHPLBJKB_01024 0.57 +0.8
1,060,424 + OHPLBJKB_01024 0.59 -0.4
1,060,424 + OHPLBJKB_01024 0.59 -1.1
1,060,425 - OHPLBJKB_01024 0.60 -1.2
1,060,425 - OHPLBJKB_01024 0.60 +0.8
1,060,428 - OHPLBJKB_01024 0.60 +0.3
1,060,493 + OHPLBJKB_01024 0.64 +0.6
1,060,493 + OHPLBJKB_01024 0.64 +0.5
1,060,544 + OHPLBJKB_01024 0.68 -0.1
1,060,544 + OHPLBJKB_01024 0.68 -1.1
1,060,544 + OHPLBJKB_01024 0.68 +0.1
1,060,545 - OHPLBJKB_01024 0.68 -0.1
1,060,545 - OHPLBJKB_01024 0.68 -0.4
1,060,545 - OHPLBJKB_01024 0.68 +0.4
1,060,545 - OHPLBJKB_01024 0.68 -0.9

Or see this region's nucleotide sequence