Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS18945

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
4,767,421	+				-0.1
4,767,493	-				-1.2
4,767,625	+		ABI39_RS18935	0.41	-0.6
4,767,626	-		ABI39_RS18935	0.41	-1.1
4,767,626	-		ABI39_RS18935	0.41	-0.7
4,767,633	+		ABI39_RS18935	0.42	+0.1
4,767,660	+		ABI39_RS18935	0.49	-0.5
4,767,715	+		ABI39_RS18935	0.62	+0.6
4,767,716	-		ABI39_RS18935	0.62	-0.0
4,767,888	+				+0.2
4,767,907	-				+0.2
4,767,921	-				-0.9
4,767,921	-				+1.0
4,768,038	+		ABI39_RS18940	0.19	+1.6
4,768,038	+		ABI39_RS18940	0.19	+0.7
4,768,111	+		ABI39_RS18940	0.36	-1.2
4,768,523	+				-2.0
4,768,546	-				-0.9
4,768,614	-				+0.1
4,768,614	-				-0.1
4,768,620	+				+0.4
4,768,764	+		ABI39_RS18945	0.16	+0.4
4,768,829	-		ABI39_RS18945	0.19	+1.0
4,768,860	-		ABI39_RS18945	0.20	+0.1
4,769,016	+		ABI39_RS18945	0.27	+0.0
4,769,019	-		ABI39_RS18945	0.27	-0.0
4,769,054	+		ABI39_RS18945	0.29	-0.9
4,769,074	-		ABI39_RS18945	0.29	+0.5
4,769,143	-		ABI39_RS18945	0.32	+4.5
4,769,150	+		ABI39_RS18945	0.33	+0.7
4,769,340	-		ABI39_RS18945	0.41	-1.8
4,769,361	-		ABI39_RS18945	0.42	-1.0
4,769,367	-		ABI39_RS18945	0.42	-0.3
4,769,395	-		ABI39_RS18945	0.44	+0.6
4,769,511	+		ABI39_RS18945	0.49	-0.6
4,769,511	+		ABI39_RS18945	0.49	+0.8
4,769,514	+		ABI39_RS18945	0.49	-0.1
4,769,514	+		ABI39_RS18945	0.49	+0.0
4,769,517	-		ABI39_RS18945	0.49	+0.4
4,769,522	-		ABI39_RS18945	0.49	+0.3
4,769,592	-		ABI39_RS18945	0.52	+0.1
4,769,790	-		ABI39_RS18945	0.61	-0.2
4,769,790	-		ABI39_RS18945	0.61	-0.3
4,769,792	-		ABI39_RS18945	0.61	-0.9
4,769,796	+		ABI39_RS18945	0.61	+0.4
4,769,796	+		ABI39_RS18945	0.61	-0.7
4,769,926	-		ABI39_RS18945	0.67	+0.5
4,769,973	+		ABI39_RS18945	0.69	+0.4
4,770,064	+		ABI39_RS18945	0.73	-0.4
4,770,085	-		ABI39_RS18945	0.74	-0.9
4,770,087	+		ABI39_RS18945	0.74	+0.9
4,770,090	-		ABI39_RS18945	0.74	+0.6
4,770,090	-		ABI39_RS18945	0.74	+0.8
4,770,170	+		ABI39_RS18945	0.78	-0.1
4,770,194	+		ABI39_RS18945	0.79	+0.7
4,770,195	-		ABI39_RS18945	0.79	+0.2
4,770,212	+		ABI39_RS18945	0.80	+0.2
4,770,302	+		ABI39_RS18945	0.84	+0.2
4,770,313	+		ABI39_RS18945	0.84	+1.1
4,770,381	+		ABI39_RS18945	0.87	-0.3
4,770,382	-		ABI39_RS18945	0.87	-1.4
4,770,472	-				-1.1
4,770,568	+				-0.5
4,770,674	+				+0.3
4,770,682	-				+0.5
4,770,733	+				+0.3
4,770,739	+				+0.5
4,770,777	-				+0.1
4,770,791	-				-0.4
4,770,801	+				-1.4
4,770,802	-				-1.0
4,770,903	-				+2.6
4,770,909	-				-0.4
4,770,944	+				-2.6
4,770,981	+				-0.7
4,770,982	-				+1.2
4,771,003	+		ABI39_RS18950	0.11	+0.7
4,771,031	+		ABI39_RS18950	0.14	+0.5
4,771,032	-		ABI39_RS18950	0.14	-0.7
4,771,087	+		ABI39_RS18950	0.19	-1.4
4,771,231	+		ABI39_RS18950	0.32	-0.5
4,771,277	+		ABI39_RS18950	0.36	+2.0
4,771,588	+		ABI39_RS18950	0.65	-1.2
4,771,662	+		ABI39_RS18950	0.72	+1.4
4,771,668	+		ABI39_RS18950	0.72	+0.5
4,771,671	-		ABI39_RS18950	0.73	-0.9