Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17680

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
4,468,922	-		ABI39_RS17675	0.51	-0.1
4,468,935	-		ABI39_RS17675	0.52	-0.8
4,468,935	-		ABI39_RS17675	0.52	+0.5
4,469,135	+		ABI39_RS17675	0.68	+0.4
4,469,135	+		ABI39_RS17675	0.68	-1.2
4,469,218	-		ABI39_RS17675	0.74	+0.4
4,469,220	-		ABI39_RS17675	0.74	+0.2
4,469,279	-		ABI39_RS17675	0.79	-0.1
4,469,310	-		ABI39_RS17675	0.81	-0.1
4,469,354	-		ABI39_RS17675	0.84	-0.4
4,469,405	+		ABI39_RS17675	0.88	+0.2
4,469,412	+		ABI39_RS17675	0.89	-1.6
4,469,457	+				-0.1
4,469,458	-				-0.6
4,469,493	+				-0.2
4,469,542	+				-0.7
4,469,572	+				+0.1
4,469,616	+				+0.2
4,469,690	-				+1.3
4,469,726	-				+0.1
4,469,790	-				-1.0
4,469,917	-				-0.9
4,469,917	-				+0.9
4,469,923	+				+1.2
4,469,979	+				-0.0
4,470,007	+				-1.0
4,470,009	+				+0.1
4,470,470	-		ABI39_RS17680	0.43	+0.8
4,470,474	-		ABI39_RS17680	0.44	+1.2
4,470,483	+		ABI39_RS17680	0.44	-0.4
4,470,621	+		ABI39_RS17680	0.55	+0.8
4,470,789	+		ABI39_RS17680	0.67	+1.0
4,470,790	-		ABI39_RS17680	0.67	+0.8
4,470,794	+		ABI39_RS17680	0.68	+0.1
4,470,805	+		ABI39_RS17680	0.69	-0.5
4,470,853	-		ABI39_RS17680	0.72	+0.0
4,470,853	-		ABI39_RS17680	0.72	+0.2
4,470,858	+		ABI39_RS17680	0.73	-1.2
4,470,859	-		ABI39_RS17680	0.73	-1.2
4,470,942	+		ABI39_RS17680	0.79	-0.5
4,471,203	+				+1.0
4,471,203	+				-0.2
4,471,574	-		ABI39_RS17685	0.26	+0.1
4,471,610	+		ABI39_RS17685	0.29	+0.1
4,471,637	+		ABI39_RS17685	0.31	-0.2
4,471,925	+		ABI39_RS17685	0.53	+0.8
4,471,945	-		ABI39_RS17685	0.54	-0.9
4,472,074	+		ABI39_RS17685	0.64	+0.4
4,472,203	+		ABI39_RS17685	0.74	+0.4
4,472,204	-		ABI39_RS17685	0.74	+1.6