Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17135

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
4,333,944	+		ABI39_RS17125	0.56	-2.5
4,333,944	+		ABI39_RS17125	0.56	+0.7
4,333,954	+		ABI39_RS17125	0.57	+0.3
4,333,955	-		ABI39_RS17125	0.57	-1.8
4,333,978	+		ABI39_RS17125	0.59	+1.4
4,333,987	+		ABI39_RS17125	0.60	+1.2
4,334,014	-		ABI39_RS17125	0.62	-0.1
4,334,077	-		ABI39_RS17125	0.67	-2.2
4,334,289	+		ABI39_RS17125	0.83	+0.7
4,334,317	-		ABI39_RS17125	0.85	+0.7
4,334,320	+		ABI39_RS17125	0.85	+1.2
4,334,364	-		ABI39_RS17125	0.89	-1.3
4,334,368	-		ABI39_RS17125	0.89	-0.9
4,334,436	+				+0.5
4,334,454	-				-0.4
4,334,524	-				-1.6
4,334,555	+				+1.5
4,334,556	-				-1.2
4,334,556	-				-0.5
4,334,600	+				-2.6
4,334,631	-		ABI39_RS17130	0.18	-2.8
4,334,836	+				-0.7
4,334,853	+				-0.4
4,334,870	-				-1.2
4,334,870	-				-2.3
4,334,874	+				-1.8
4,334,901	-				-1.5
4,334,901	-				-1.4
4,334,901	-				-2.0
4,334,907	+				-1.1
4,334,908	-				-2.5
4,334,908	-				-0.2
4,335,004	-				-1.0
4,335,033	-		ABI39_RS17135	0.11	-0.7
4,335,033	-		ABI39_RS17135	0.11	-3.0
4,335,080	+		ABI39_RS17135	0.14	-2.6
4,335,253	-		ABI39_RS17135	0.26	+0.1
4,335,474	+		ABI39_RS17135	0.42	-1.4
4,335,808	-		ABI39_RS17135	0.65	-1.6
4,335,839	+		ABI39_RS17135	0.67	-2.0
4,335,840	-		ABI39_RS17135	0.67	-2.9
4,335,841	+		ABI39_RS17135	0.67	-2.0
4,335,861	+		ABI39_RS17135	0.69	-1.2
4,335,996	+		ABI39_RS17135	0.78	+0.9
4,336,032	-		ABI39_RS17135	0.81	-2.3
4,336,038	+		ABI39_RS17135	0.81	+0.3
4,336,041	+		ABI39_RS17135	0.81	+0.7
4,336,068	-		ABI39_RS17135	0.83	-1.9
4,336,107	-		ABI39_RS17135	0.86	-0.3
4,336,191	+				+0.4
4,336,192	-				-0.0
4,336,210	+				-1.5
4,336,211	-				-0.6
4,336,335	+				-0.2
4,336,335	+				-0.9
4,336,522	-				+1.0
4,336,658	+				+0.0
4,336,659	-				-0.3
4,336,703	+		ABI39_RS17140	0.12	-0.2
4,336,724	+		ABI39_RS17140	0.14	+0.3
4,336,833	+		ABI39_RS17140	0.25	-0.4
4,337,088	+		ABI39_RS17140	0.50	-1.1
4,337,235	+		ABI39_RS17140	0.65	+0.2
4,337,294	-		ABI39_RS17140	0.71	-1.9
4,337,294	-		ABI39_RS17140	0.71	-0.5