Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14910

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
3,870,037	+				-0.9
3,870,037	+				+0.8
3,870,100	-				-0.3
3,870,104	-				+0.1
3,870,112	+				-0.1
3,870,113	-				+0.2
3,870,148	+				+0.3
3,870,149	-				-0.7
3,870,149	-				-1.0
3,870,150	+				-0.4
3,870,169	+				-0.5
3,870,170	-				-0.4
3,870,170	-				+0.8
3,870,173	-				-1.0
3,870,173	-				-0.2
3,870,225	+				+1.1
3,870,246	-				+1.1
3,870,327	-		ABI39_RS14905	0.10	+0.8
3,870,410	+		ABI39_RS14905	0.22	-0.3
3,870,479	+		ABI39_RS14905	0.31	+0.2
3,870,479	+		ABI39_RS14905	0.31	+0.5
3,870,479	+		ABI39_RS14905	0.31	+0.3
3,870,479	+		ABI39_RS14905	0.31	+0.3
3,870,544	-		ABI39_RS14905	0.40	+0.1
3,870,558	-		ABI39_RS14905	0.42	+0.2
3,870,560	+		ABI39_RS14905	0.42	-1.7
3,870,633	-		ABI39_RS14905	0.52	+0.5
3,870,687	-		ABI39_RS14905	0.60	-0.5
3,870,735	+		ABI39_RS14905	0.66	-0.2
3,870,736	-		ABI39_RS14905	0.66	+0.7
3,870,746	+		ABI39_RS14905	0.68	+0.0
3,870,746	+		ABI39_RS14905	0.68	-0.4
3,870,781	+		ABI39_RS14905	0.72	+1.4
3,870,955	+				+0.8
3,870,987	-				-0.5
3,871,069	+				+0.6
3,871,073	-				+1.2
3,871,276	-		ABI39_RS14910	0.17	+1.2
3,871,343	+		ABI39_RS14910	0.21	+0.2
3,871,349	+		ABI39_RS14910	0.21	+0.7
3,871,471	-		ABI39_RS14910	0.29	+2.2
3,871,493	-		ABI39_RS14910	0.30	+1.8
3,871,607	+		ABI39_RS14910	0.37	+1.5
3,871,635	+		ABI39_RS14910	0.39	-0.8
3,871,668	+		ABI39_RS14910	0.41	+0.8
3,871,674	+		ABI39_RS14910	0.41	-0.3
3,871,689	+		ABI39_RS14910	0.42	+2.2
3,871,692	-		ABI39_RS14910	0.42	+1.7
3,871,864	-		ABI39_RS14910	0.52	+2.2
3,871,865	+		ABI39_RS14910	0.53	+1.7
3,871,865	+		ABI39_RS14910	0.53	+1.8
3,871,866	-		ABI39_RS14910	0.53	+2.1
3,871,866	-		ABI39_RS14910	0.53	+1.2
3,871,867	+		ABI39_RS14910	0.53	+0.7
3,871,868	-		ABI39_RS14910	0.53	+1.1
3,871,969	+		ABI39_RS14910	0.59	+0.4
3,871,970	-		ABI39_RS14910	0.59	-0.4
3,872,202	-		ABI39_RS14910	0.73	-1.1
3,872,206	-		ABI39_RS14910	0.73	+0.4
3,872,227	+		ABI39_RS14910	0.74	-1.3
3,872,368	+		ABI39_RS14910	0.83	-0.7
3,872,643	+				+1.0
3,872,714	+				-0.4
3,872,722	-				+1.1
3,872,726	+				+0.1
3,872,727	-				-0.3
3,872,784	-				-1.0
3,872,881	-		ABI39_RS14915	0.19	+0.1
3,872,881	-		ABI39_RS14915	0.19	+0.7
3,872,904	-		ABI39_RS14915	0.23	-0.3
3,872,955	-		ABI39_RS14915	0.32	-1.5
3,873,085	-		ABI39_RS14915	0.54	-2.7
3,873,089	+		ABI39_RS14915	0.54	-0.7
3,873,089	+		ABI39_RS14915	0.54	-1.9
3,873,115	-		ABI39_RS14915	0.59	-1.2
3,873,157	-		ABI39_RS14915	0.66	-0.8
3,873,347	+				+0.8
3,873,356	-				+0.3
3,873,411	+				-0.4
3,873,495	-				+0.3
3,873,525	-				+0.7
3,873,624	+				-0.2
3,873,637	-				-0.7
3,873,637	-				-0.6