Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14780

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
3,838,446	-		ABI39_RS14775	0.24	+0.7
3,838,459	+		ABI39_RS14775	0.26	+0.5
3,838,475	+		ABI39_RS14775	0.27	-1.1
3,838,723	-		ABI39_RS14775	0.51	+1.8
3,838,727	-		ABI39_RS14775	0.52	-0.0
3,838,742	-		ABI39_RS14775	0.53	-0.4
3,838,784	-		ABI39_RS14775	0.57	-0.2
3,838,856	-		ABI39_RS14775	0.64	-0.3
3,838,887	+		ABI39_RS14775	0.67	+1.1
3,838,888	-		ABI39_RS14775	0.67	-1.1
3,838,888	-		ABI39_RS14775	0.67	+0.7
3,838,893	-		ABI39_RS14775	0.68	+0.2
3,838,926	-		ABI39_RS14775	0.71	-0.1
3,838,937	+		ABI39_RS14775	0.72	+0.2
3,838,937	+		ABI39_RS14775	0.72	+0.2
3,838,959	-		ABI39_RS14775	0.74	-1.9
3,838,979	+		ABI39_RS14775	0.76	+0.2
3,838,984	-		ABI39_RS14775	0.77	+0.7
3,838,984	-		ABI39_RS14775	0.77	-0.2
3,839,015	-		ABI39_RS14775	0.80	+0.4
3,839,069	-		ABI39_RS14775	0.85	+0.2
3,839,089	+		ABI39_RS14775	0.87	+0.6
3,839,186	-				-0.1
3,839,186	-				-0.2
3,839,186	-				+0.0
3,839,233	+				+1.6
3,839,271	+				+0.7
3,839,279	+				+0.4
3,839,283	+				+0.6
3,839,284	-				+0.0
3,839,321	-				+0.5
3,839,389	-				+0.8
3,839,400	-				+1.0
3,839,401	+				+1.3
3,839,520	-		ABI39_RS14780	0.14	+0.1
3,839,551	+		ABI39_RS14780	0.18	+1.0
3,839,558	-		ABI39_RS14780	0.19	+1.7
3,839,585	+		ABI39_RS14780	0.22	+0.9
3,839,613	-		ABI39_RS14780	0.26	+0.2
3,839,620	-		ABI39_RS14780	0.27	-0.3
3,839,642	+		ABI39_RS14780	0.30	+1.0
3,839,670	-		ABI39_RS14780	0.33	-0.7
3,839,698	+		ABI39_RS14780	0.36	+1.1
3,839,766	-		ABI39_RS14780	0.45	+1.3
3,839,822	-		ABI39_RS14780	0.52	+0.3
3,839,831	+		ABI39_RS14780	0.53	-0.1
3,839,864	+		ABI39_RS14780	0.57	+0.8
3,839,925	-		ABI39_RS14780	0.64	+0.7
3,839,971	+		ABI39_RS14780	0.70	+1.7
3,839,971	+		ABI39_RS14780	0.70	+1.4
3,839,972	-		ABI39_RS14780	0.70	+0.3
3,840,023	+		ABI39_RS14780	0.77	+2.3
3,840,044	+		ABI39_RS14780	0.79	+1.7
3,840,089	+		ABI39_RS14780	0.85	+0.4
3,840,143	-				-1.6
3,840,143	-				+0.7
3,840,228	+				+0.2
3,840,289	+				+1.6
3,840,289	+				+2.0
3,840,389	-		ABI39_RS14785	0.15	+0.7
3,840,435	+		ABI39_RS14785	0.21	+0.7
3,840,436	-		ABI39_RS14785	0.21	+1.4
3,840,494	-		ABI39_RS14785	0.27	+0.3
3,840,506	-		ABI39_RS14785	0.29	-0.7
3,840,517	-		ABI39_RS14785	0.30	-0.0
3,840,518	+		ABI39_RS14785	0.30	+1.1
3,840,649	+		ABI39_RS14785	0.45	+0.6
3,840,726	+		ABI39_RS14785	0.53	-0.1
3,840,750	-		ABI39_RS14785	0.56	-1.0
3,840,800	+		ABI39_RS14785	0.62	+0.6
3,840,800	+		ABI39_RS14785	0.62	+0.1
3,840,827	+		ABI39_RS14785	0.65	+1.0
3,840,830	+		ABI39_RS14785	0.65	+0.7
3,840,830	+		ABI39_RS14785	0.65	-0.1
3,840,832	+		ABI39_RS14785	0.65	+1.6
3,840,841	+		ABI39_RS14785	0.66	-0.1
3,841,027	-		ABI39_RS14785	0.87	-0.6
3,841,035	-		ABI39_RS14785	0.88	-1.3
3,841,047	+		ABI39_RS14785	0.89	+1.6
3,841,137	-				+0.4
3,841,137	-				+1.3
3,841,137	-				+0.9
3,841,138	+				+0.4
3,841,153	-				+0.3
3,841,183	+				+1.2
3,841,201	-				+0.6
3,841,203	+				-0.2