Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14010

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
3,644,198	+		ABI39_RS14005	0.48	+0.4
3,644,331	-		ABI39_RS14005	0.58	+0.0
3,644,549	+		ABI39_RS14005	0.76	-1.6
3,644,582	+		ABI39_RS14005	0.78	+1.0
3,644,609	+		ABI39_RS14005	0.81	-0.4
3,644,668	-		ABI39_RS14005	0.85	+1.0
3,644,675	+		ABI39_RS14005	0.86	+0.8
3,644,675	+		ABI39_RS14005	0.86	+0.7
3,644,676	-		ABI39_RS14005	0.86	+0.1
3,644,731	+				+1.1
3,644,767	-				+0.3
3,644,952	+				+1.2
3,645,039	+				+0.3
3,645,239	+		ABI39_RS14010	0.21	+0.5
3,645,253	+		ABI39_RS14010	0.22	+0.7
3,645,254	-		ABI39_RS14010	0.22	-0.7
3,645,334	+		ABI39_RS14010	0.28	+0.3
3,645,547	-		ABI39_RS14010	0.43	-0.1
3,645,553	-		ABI39_RS14010	0.43	+0.3
3,645,605	-		ABI39_RS14010	0.47	+0.2
3,645,607	-		ABI39_RS14010	0.47	-0.0
3,645,607	-		ABI39_RS14010	0.47	+0.6
3,645,608	+		ABI39_RS14010	0.47	-0.5
3,645,609	-		ABI39_RS14010	0.47	+0.5
3,645,684	+		ABI39_RS14010	0.52	+1.7
3,645,852	+		ABI39_RS14010	0.64	-0.5
3,645,860	+		ABI39_RS14010	0.64	+0.8
3,645,861	-		ABI39_RS14010	0.64	+0.2
3,646,106	-		ABI39_RS14010	0.81	+0.4
3,646,176	+		ABI39_RS14010	0.86	+0.2
3,646,176	+		ABI39_RS14010	0.86	+0.1
3,646,276	+				+0.4
3,646,281	+				+0.6
3,646,315	+				-0.3
3,646,334	-				+1.1
3,646,369	-				-0.1
3,646,372	+				+0.3
3,646,437	-				+1.6
3,646,526	-		ABI39_RS14015	0.11	-0.2
3,646,691	+		ABI39_RS14015	0.23	-0.9
3,646,695	-		ABI39_RS14015	0.24	-0.8
3,646,706	+		ABI39_RS14015	0.25	-1.3
3,646,768	+		ABI39_RS14015	0.29	+0.8
3,646,814	+		ABI39_RS14015	0.33	+1.1
3,646,891	-		ABI39_RS14015	0.38	-3.2
3,647,060	+		ABI39_RS14015	0.51	+0.2
3,647,062	+		ABI39_RS14015	0.51	-0.6
3,647,063	-		ABI39_RS14015	0.51	-0.6
3,647,167	-		ABI39_RS14015	0.59	+0.8
3,647,169	-		ABI39_RS14015	0.59	-0.2
3,647,169	-		ABI39_RS14015	0.59	-0.5
3,647,274	+		ABI39_RS14015	0.67	-1.7
3,647,274	+		ABI39_RS14015	0.67	-1.1
3,647,295	+		ABI39_RS14015	0.68	-0.5
3,647,299	-		ABI39_RS14015	0.68	-0.8
3,647,303	+		ABI39_RS14015	0.69	+0.8