Experiment: T4 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03460 and OHPLBJKB_03461 are separated by 366 nucleotides OHPLBJKB_03461 and OHPLBJKB_03462 are separated by 187 nucleotides
OHPLBJKB_03460: OHPLBJKB_03460 - 16S ribosomal RNA, at 3,617,762 to 3,619,299
_03460
OHPLBJKB_03461: OHPLBJKB_03461 - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase, at 3,619,666 to 3,620,238
_03461
OHPLBJKB_03462: OHPLBJKB_03462 - Methionine import ATP-binding protein MetN, at 3,620,426 to 3,621,457
_03462
Position (kb)
3619
3620
3621 Strain fitness (log2 ratio)
-2
-1
0
1 at 3619.599 kb on + strand at 3619.599 kb on + strand at 3619.641 kb on - strand at 3619.756 kb on - strand, within OHPLBJKB_03461 at 3619.758 kb on + strand, within OHPLBJKB_03461 at 3619.819 kb on - strand, within OHPLBJKB_03461 at 3619.825 kb on + strand, within OHPLBJKB_03461 at 3619.843 kb on - strand, within OHPLBJKB_03461 at 3619.843 kb on - strand, within OHPLBJKB_03461 at 3619.863 kb on + strand, within OHPLBJKB_03461 at 3619.970 kb on + strand, within OHPLBJKB_03461 at 3619.970 kb on + strand, within OHPLBJKB_03461 at 3619.971 kb on - strand, within OHPLBJKB_03461 at 3619.974 kb on + strand, within OHPLBJKB_03461 at 3620.087 kb on - strand, within OHPLBJKB_03461 at 3620.191 kb on - strand at 3620.245 kb on + strand at 3620.246 kb on - strand at 3620.246 kb on - strand at 3620.254 kb on - strand at 3620.274 kb on + strand at 3620.399 kb on + strand at 3620.405 kb on - strand at 3620.405 kb on - strand at 3620.413 kb on + strand at 3620.414 kb on - strand at 3620.416 kb on + strand at 3620.416 kb on + strand at 3620.417 kb on - strand at 3620.417 kb on - strand at 3620.417 kb on - strand at 3620.420 kb on + strand at 3620.420 kb on + strand at 3620.420 kb on + strand at 3620.421 kb on - strand at 3620.421 kb on - strand at 3620.431 kb on - strand at 3620.444 kb on - strand at 3620.525 kb on + strand at 3620.554 kb on + strand, within OHPLBJKB_03462 at 3620.561 kb on - strand, within OHPLBJKB_03462 at 3620.561 kb on - strand, within OHPLBJKB_03462 at 3620.566 kb on + strand, within OHPLBJKB_03462 at 3620.567 kb on - strand, within OHPLBJKB_03462 at 3620.567 kb on - strand, within OHPLBJKB_03462 at 3620.567 kb on - strand, within OHPLBJKB_03462 at 3620.568 kb on + strand, within OHPLBJKB_03462 at 3620.568 kb on + strand, within OHPLBJKB_03462 at 3620.568 kb on + strand, within OHPLBJKB_03462 at 3620.568 kb on + strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.569 kb on - strand, within OHPLBJKB_03462 at 3620.606 kb on - strand, within OHPLBJKB_03462 at 3620.681 kb on - strand, within OHPLBJKB_03462 at 3620.716 kb on + strand, within OHPLBJKB_03462 at 3620.717 kb on - strand, within OHPLBJKB_03462 at 3620.830 kb on + strand, within OHPLBJKB_03462 at 3620.830 kb on + strand, within OHPLBJKB_03462 at 3620.830 kb on + strand, within OHPLBJKB_03462 at 3620.831 kb on - strand, within OHPLBJKB_03462 at 3620.831 kb on - strand, within OHPLBJKB_03462 at 3620.834 kb on + strand, within OHPLBJKB_03462 at 3620.835 kb on - strand, within OHPLBJKB_03462 at 3620.907 kb on + strand, within OHPLBJKB_03462 at 3620.907 kb on + strand, within OHPLBJKB_03462 at 3620.907 kb on + strand, within OHPLBJKB_03462 at 3620.908 kb on - strand, within OHPLBJKB_03462 at 3620.908 kb on - strand, within OHPLBJKB_03462 at 3620.908 kb on - strand, within OHPLBJKB_03462 at 3620.908 kb on - strand, within OHPLBJKB_03462 at 3620.960 kb on - strand, within OHPLBJKB_03462 at 3620.960 kb on - strand, within OHPLBJKB_03462 at 3620.960 kb on - strand, within OHPLBJKB_03462 at 3621.037 kb on - strand, within OHPLBJKB_03462 at 3621.037 kb on - strand, within OHPLBJKB_03462 at 3621.037 kb on - strand, within OHPLBJKB_03462 at 3621.099 kb on + strand, within OHPLBJKB_03462 at 3621.146 kb on - strand, within OHPLBJKB_03462 at 3621.211 kb on + strand, within OHPLBJKB_03462 at 3621.211 kb on + strand, within OHPLBJKB_03462
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI1 remove 3,619,599 + +0.5 3,619,599 + +0.3 3,619,641 - -0.5 3,619,756 - OHPLBJKB_03461 0.16 +1.6 3,619,758 + OHPLBJKB_03461 0.16 -0.0 3,619,819 - OHPLBJKB_03461 0.27 -0.4 3,619,825 + OHPLBJKB_03461 0.28 +1.2 3,619,843 - OHPLBJKB_03461 0.31 -0.4 3,619,843 - OHPLBJKB_03461 0.31 -0.4 3,619,863 + OHPLBJKB_03461 0.34 +0.4 3,619,970 + OHPLBJKB_03461 0.53 +0.6 3,619,970 + OHPLBJKB_03461 0.53 -1.8 3,619,971 - OHPLBJKB_03461 0.53 -0.1 3,619,974 + OHPLBJKB_03461 0.54 -0.6 3,620,087 - OHPLBJKB_03461 0.73 +0.4 3,620,191 - +1.0 3,620,245 + +1.0 3,620,246 - -0.0 3,620,246 - -0.4 3,620,254 - -0.2 3,620,274 + -0.6 3,620,399 + -1.1 3,620,405 - -0.5 3,620,405 - +0.3 3,620,413 + -0.4 3,620,414 - -0.6 3,620,416 + -0.3 3,620,416 + +0.0 3,620,417 - +0.1 3,620,417 - +0.2 3,620,417 - +0.2 3,620,420 + +1.1 3,620,420 + +0.3 3,620,420 + +0.1 3,620,421 - +1.4 3,620,421 - +0.2 3,620,431 - -1.5 3,620,444 - +1.1 3,620,525 + -2.6 3,620,554 + OHPLBJKB_03462 0.12 -0.6 3,620,561 - OHPLBJKB_03462 0.13 +0.2 3,620,561 - OHPLBJKB_03462 0.13 +0.4 3,620,566 + OHPLBJKB_03462 0.14 -0.8 3,620,567 - OHPLBJKB_03462 0.14 -0.4 3,620,567 - OHPLBJKB_03462 0.14 +0.3 3,620,567 - OHPLBJKB_03462 0.14 -0.0 3,620,568 + OHPLBJKB_03462 0.14 +0.8 3,620,568 + OHPLBJKB_03462 0.14 +0.0 3,620,568 + OHPLBJKB_03462 0.14 -1.0 3,620,568 + OHPLBJKB_03462 0.14 -0.2 3,620,569 - OHPLBJKB_03462 0.14 -0.1 3,620,569 - OHPLBJKB_03462 0.14 +0.0 3,620,569 - OHPLBJKB_03462 0.14 +0.3 3,620,569 - OHPLBJKB_03462 0.14 -0.4 3,620,569 - OHPLBJKB_03462 0.14 -0.7 3,620,569 - OHPLBJKB_03462 0.14 +1.1 3,620,569 - OHPLBJKB_03462 0.14 -0.1 3,620,569 - OHPLBJKB_03462 0.14 -1.2 3,620,569 - OHPLBJKB_03462 0.14 -0.4 3,620,569 - OHPLBJKB_03462 0.14 +0.7 3,620,606 - OHPLBJKB_03462 0.17 -0.1 3,620,681 - OHPLBJKB_03462 0.25 -0.6 3,620,716 + OHPLBJKB_03462 0.28 -0.0 3,620,717 - OHPLBJKB_03462 0.28 -0.2 3,620,830 + OHPLBJKB_03462 0.39 +0.7 3,620,830 + OHPLBJKB_03462 0.39 +0.6 3,620,830 + OHPLBJKB_03462 0.39 +0.3 3,620,831 - OHPLBJKB_03462 0.39 -0.4 3,620,831 - OHPLBJKB_03462 0.39 +0.2 3,620,834 + OHPLBJKB_03462 0.40 +0.3 3,620,835 - OHPLBJKB_03462 0.40 -0.7 3,620,907 + OHPLBJKB_03462 0.47 +0.4 3,620,907 + OHPLBJKB_03462 0.47 -1.3 3,620,907 + OHPLBJKB_03462 0.47 -0.0 3,620,908 - OHPLBJKB_03462 0.47 -1.8 3,620,908 - OHPLBJKB_03462 0.47 +0.5 3,620,908 - OHPLBJKB_03462 0.47 +0.6 3,620,908 - OHPLBJKB_03462 0.47 +1.4 3,620,960 - OHPLBJKB_03462 0.52 +0.3 3,620,960 - OHPLBJKB_03462 0.52 -0.0 3,620,960 - OHPLBJKB_03462 0.52 +0.3 3,621,037 - OHPLBJKB_03462 0.59 -0.9 3,621,037 - OHPLBJKB_03462 0.59 -1.5 3,621,037 - OHPLBJKB_03462 0.59 +0.4 3,621,099 + OHPLBJKB_03462 0.65 +0.9 3,621,146 - OHPLBJKB_03462 0.70 +0.3 3,621,211 + OHPLBJKB_03462 0.76 +1.4 3,621,211 + OHPLBJKB_03462 0.76 +0.0
Or see this region's nucleotide sequence