Experiment: T4 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02737 and OHPLBJKB_02738 are separated by 184 nucleotides OHPLBJKB_02738 and OHPLBJKB_02739 are separated by 278 nucleotides
OHPLBJKB_02737: OHPLBJKB_02737 - Outer membrane protein F, at 2,854,040 to 2,855,128
_02737
OHPLBJKB_02738: OHPLBJKB_02738 - Aspartate aminotransferase, at 2,855,313 to 2,856,503
_02738
OHPLBJKB_02739: OHPLBJKB_02739 - IS110 family transposase IS621, at 2,856,782 to 2,857,762
_02739
Position (kb)
2855
2856
2857 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2854.373 kb on + strand, within OHPLBJKB_02737 at 2854.373 kb on + strand, within OHPLBJKB_02737 at 2854.374 kb on - strand, within OHPLBJKB_02737 at 2854.374 kb on - strand, within OHPLBJKB_02737 at 2854.409 kb on + strand, within OHPLBJKB_02737 at 2854.409 kb on + strand, within OHPLBJKB_02737 at 2854.409 kb on + strand, within OHPLBJKB_02737 at 2854.421 kb on + strand, within OHPLBJKB_02737 at 2854.422 kb on - strand, within OHPLBJKB_02737 at 2854.437 kb on - strand, within OHPLBJKB_02737 at 2854.445 kb on - strand, within OHPLBJKB_02737 at 2854.469 kb on - strand, within OHPLBJKB_02737 at 2854.469 kb on - strand, within OHPLBJKB_02737 at 2854.517 kb on - strand, within OHPLBJKB_02737 at 2854.520 kb on + strand, within OHPLBJKB_02737 at 2854.520 kb on + strand, within OHPLBJKB_02737 at 2854.521 kb on - strand, within OHPLBJKB_02737 at 2854.525 kb on + strand, within OHPLBJKB_02737 at 2854.526 kb on - strand, within OHPLBJKB_02737 at 2854.575 kb on - strand, within OHPLBJKB_02737 at 2854.582 kb on + strand, within OHPLBJKB_02737 at 2854.637 kb on - strand, within OHPLBJKB_02737 at 2854.663 kb on + strand, within OHPLBJKB_02737 at 2854.676 kb on + strand, within OHPLBJKB_02737 at 2854.764 kb on - strand, within OHPLBJKB_02737 at 2854.781 kb on + strand, within OHPLBJKB_02737 at 2854.782 kb on - strand, within OHPLBJKB_02737 at 2854.797 kb on - strand, within OHPLBJKB_02737 at 2854.832 kb on - strand, within OHPLBJKB_02737 at 2854.881 kb on + strand, within OHPLBJKB_02737 at 2854.929 kb on - strand, within OHPLBJKB_02737 at 2854.929 kb on - strand, within OHPLBJKB_02737 at 2854.953 kb on + strand, within OHPLBJKB_02737 at 2854.953 kb on + strand, within OHPLBJKB_02737 at 2854.953 kb on + strand, within OHPLBJKB_02737 at 2854.954 kb on - strand, within OHPLBJKB_02737 at 2854.954 kb on - strand, within OHPLBJKB_02737 at 2854.954 kb on - strand, within OHPLBJKB_02737 at 2854.985 kb on + strand, within OHPLBJKB_02737 at 2854.986 kb on - strand, within OHPLBJKB_02737 at 2854.986 kb on - strand, within OHPLBJKB_02737 at 2855.007 kb on - strand, within OHPLBJKB_02737 at 2855.007 kb on - strand, within OHPLBJKB_02737 at 2855.007 kb on - strand, within OHPLBJKB_02737 at 2855.007 kb on - strand, within OHPLBJKB_02737 at 2855.007 kb on - strand, within OHPLBJKB_02737 at 2855.010 kb on - strand, within OHPLBJKB_02737 at 2855.033 kb on + strand at 2855.033 kb on + strand at 2855.033 kb on + strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.034 kb on - strand at 2855.082 kb on + strand at 2855.082 kb on + strand at 2855.126 kb on + strand at 2855.127 kb on - strand at 2855.127 kb on - strand at 2855.237 kb on + strand at 2855.240 kb on + strand at 2855.418 kb on + strand at 2855.418 kb on + strand at 2855.418 kb on + strand at 2855.419 kb on - strand at 2855.475 kb on + strand, within OHPLBJKB_02738 at 2855.476 kb on - strand, within OHPLBJKB_02738 at 2855.752 kb on - strand, within OHPLBJKB_02738 at 2855.752 kb on - strand, within OHPLBJKB_02738 at 2855.760 kb on + strand, within OHPLBJKB_02738 at 2855.760 kb on + strand, within OHPLBJKB_02738 at 2855.761 kb on - strand, within OHPLBJKB_02738 at 2855.801 kb on + strand, within OHPLBJKB_02738 at 2856.011 kb on + strand, within OHPLBJKB_02738 at 2856.017 kb on + strand, within OHPLBJKB_02738 at 2856.017 kb on + strand, within OHPLBJKB_02738 at 2856.087 kb on - strand, within OHPLBJKB_02738 at 2856.160 kb on - strand, within OHPLBJKB_02738 at 2856.160 kb on - strand, within OHPLBJKB_02738 at 2856.160 kb on - strand, within OHPLBJKB_02738 at 2856.220 kb on + strand, within OHPLBJKB_02738 at 2856.251 kb on + strand, within OHPLBJKB_02738 at 2856.293 kb on + strand, within OHPLBJKB_02738 at 2856.333 kb on - strand, within OHPLBJKB_02738 at 2856.413 kb on - strand at 2856.462 kb on - strand at 2856.462 kb on - strand at 2856.502 kb on - strand at 2856.509 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI1 remove 2,854,373 + OHPLBJKB_02737 0.31 -0.2 2,854,373 + OHPLBJKB_02737 0.31 -1.1 2,854,374 - OHPLBJKB_02737 0.31 +0.1 2,854,374 - OHPLBJKB_02737 0.31 -0.2 2,854,409 + OHPLBJKB_02737 0.34 -1.8 2,854,409 + OHPLBJKB_02737 0.34 +1.0 2,854,409 + OHPLBJKB_02737 0.34 -0.9 2,854,421 + OHPLBJKB_02737 0.35 +0.0 2,854,422 - OHPLBJKB_02737 0.35 +0.5 2,854,437 - OHPLBJKB_02737 0.36 -1.0 2,854,445 - OHPLBJKB_02737 0.37 -0.2 2,854,469 - OHPLBJKB_02737 0.39 +0.6 2,854,469 - OHPLBJKB_02737 0.39 +0.7 2,854,517 - OHPLBJKB_02737 0.44 +0.1 2,854,520 + OHPLBJKB_02737 0.44 +0.4 2,854,520 + OHPLBJKB_02737 0.44 +0.8 2,854,521 - OHPLBJKB_02737 0.44 +0.2 2,854,525 + OHPLBJKB_02737 0.45 +0.2 2,854,526 - OHPLBJKB_02737 0.45 -0.3 2,854,575 - OHPLBJKB_02737 0.49 -0.1 2,854,582 + OHPLBJKB_02737 0.50 -0.1 2,854,637 - OHPLBJKB_02737 0.55 +0.3 2,854,663 + OHPLBJKB_02737 0.57 +0.9 2,854,676 + OHPLBJKB_02737 0.58 +0.8 2,854,764 - OHPLBJKB_02737 0.66 +0.7 2,854,781 + OHPLBJKB_02737 0.68 -0.2 2,854,782 - OHPLBJKB_02737 0.68 +0.3 2,854,797 - OHPLBJKB_02737 0.70 -0.4 2,854,832 - OHPLBJKB_02737 0.73 +0.4 2,854,881 + OHPLBJKB_02737 0.77 +0.3 2,854,929 - OHPLBJKB_02737 0.82 +0.3 2,854,929 - OHPLBJKB_02737 0.82 -0.2 2,854,953 + OHPLBJKB_02737 0.84 -0.1 2,854,953 + OHPLBJKB_02737 0.84 +0.5 2,854,953 + OHPLBJKB_02737 0.84 -0.6 2,854,954 - OHPLBJKB_02737 0.84 +0.3 2,854,954 - OHPLBJKB_02737 0.84 -1.0 2,854,954 - OHPLBJKB_02737 0.84 -0.7 2,854,985 + OHPLBJKB_02737 0.87 +0.1 2,854,986 - OHPLBJKB_02737 0.87 +0.0 2,854,986 - OHPLBJKB_02737 0.87 -0.3 2,855,007 - OHPLBJKB_02737 0.89 -0.2 2,855,007 - OHPLBJKB_02737 0.89 -0.2 2,855,007 - OHPLBJKB_02737 0.89 +0.7 2,855,007 - OHPLBJKB_02737 0.89 -0.5 2,855,007 - OHPLBJKB_02737 0.89 -1.1 2,855,010 - OHPLBJKB_02737 0.89 -0.2 2,855,033 + +0.4 2,855,033 + +1.2 2,855,033 + -1.1 2,855,034 - -0.2 2,855,034 - +0.0 2,855,034 - -0.1 2,855,034 - +0.1 2,855,034 - +0.2 2,855,034 - +0.3 2,855,034 - +1.4 2,855,034 - +0.2 2,855,034 - -0.1 2,855,082 + +0.4 2,855,082 + -0.3 2,855,126 + -0.1 2,855,127 - +0.2 2,855,127 - +0.7 2,855,237 + -0.2 2,855,240 + +0.1 2,855,418 + -0.6 2,855,418 + +0.6 2,855,418 + +0.5 2,855,419 - -0.4 2,855,475 + OHPLBJKB_02738 0.14 -1.2 2,855,476 - OHPLBJKB_02738 0.14 +0.8 2,855,752 - OHPLBJKB_02738 0.37 -0.5 2,855,752 - OHPLBJKB_02738 0.37 +0.3 2,855,760 + OHPLBJKB_02738 0.38 +1.8 2,855,760 + OHPLBJKB_02738 0.38 +0.2 2,855,761 - OHPLBJKB_02738 0.38 -0.5 2,855,801 + OHPLBJKB_02738 0.41 -0.9 2,856,011 + OHPLBJKB_02738 0.59 -0.6 2,856,017 + OHPLBJKB_02738 0.59 -0.9 2,856,017 + OHPLBJKB_02738 0.59 +0.5 2,856,087 - OHPLBJKB_02738 0.65 -0.5 2,856,160 - OHPLBJKB_02738 0.71 +0.0 2,856,160 - OHPLBJKB_02738 0.71 +0.8 2,856,160 - OHPLBJKB_02738 0.71 -0.4 2,856,220 + OHPLBJKB_02738 0.76 -0.3 2,856,251 + OHPLBJKB_02738 0.79 -1.0 2,856,293 + OHPLBJKB_02738 0.82 -0.5 2,856,333 - OHPLBJKB_02738 0.86 +0.8 2,856,413 - -0.5 2,856,462 - -1.0 2,856,462 - -0.1 2,856,502 - +1.2 2,856,509 - -0.1
Or see this region's nucleotide sequence