Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02738

Experiment: T4 MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02737 and OHPLBJKB_02738 are separated by 184 nucleotidesOHPLBJKB_02738 and OHPLBJKB_02739 are separated by 278 nucleotides OHPLBJKB_02737: OHPLBJKB_02737 - Outer membrane protein F, at 2,854,040 to 2,855,128 _02737 OHPLBJKB_02738: OHPLBJKB_02738 - Aspartate aminotransferase, at 2,855,313 to 2,856,503 _02738 OHPLBJKB_02739: OHPLBJKB_02739 - IS110 family transposase IS621, at 2,856,782 to 2,857,762 _02739 Position (kb) 2855 2856 2857Strain fitness (log2 ratio) -2 -1 0 1 2at 2854.373 kb on + strand, within OHPLBJKB_02737at 2854.373 kb on + strand, within OHPLBJKB_02737at 2854.374 kb on - strand, within OHPLBJKB_02737at 2854.374 kb on - strand, within OHPLBJKB_02737at 2854.409 kb on + strand, within OHPLBJKB_02737at 2854.409 kb on + strand, within OHPLBJKB_02737at 2854.409 kb on + strand, within OHPLBJKB_02737at 2854.421 kb on + strand, within OHPLBJKB_02737at 2854.422 kb on - strand, within OHPLBJKB_02737at 2854.437 kb on - strand, within OHPLBJKB_02737at 2854.445 kb on - strand, within OHPLBJKB_02737at 2854.469 kb on - strand, within OHPLBJKB_02737at 2854.469 kb on - strand, within OHPLBJKB_02737at 2854.517 kb on - strand, within OHPLBJKB_02737at 2854.520 kb on + strand, within OHPLBJKB_02737at 2854.520 kb on + strand, within OHPLBJKB_02737at 2854.521 kb on - strand, within OHPLBJKB_02737at 2854.525 kb on + strand, within OHPLBJKB_02737at 2854.526 kb on - strand, within OHPLBJKB_02737at 2854.575 kb on - strand, within OHPLBJKB_02737at 2854.582 kb on + strand, within OHPLBJKB_02737at 2854.637 kb on - strand, within OHPLBJKB_02737at 2854.663 kb on + strand, within OHPLBJKB_02737at 2854.676 kb on + strand, within OHPLBJKB_02737at 2854.764 kb on - strand, within OHPLBJKB_02737at 2854.781 kb on + strand, within OHPLBJKB_02737at 2854.782 kb on - strand, within OHPLBJKB_02737at 2854.797 kb on - strand, within OHPLBJKB_02737at 2854.832 kb on - strand, within OHPLBJKB_02737at 2854.881 kb on + strand, within OHPLBJKB_02737at 2854.929 kb on - strand, within OHPLBJKB_02737at 2854.929 kb on - strand, within OHPLBJKB_02737at 2854.953 kb on + strand, within OHPLBJKB_02737at 2854.953 kb on + strand, within OHPLBJKB_02737at 2854.953 kb on + strand, within OHPLBJKB_02737at 2854.954 kb on - strand, within OHPLBJKB_02737at 2854.954 kb on - strand, within OHPLBJKB_02737at 2854.954 kb on - strand, within OHPLBJKB_02737at 2854.985 kb on + strand, within OHPLBJKB_02737at 2854.986 kb on - strand, within OHPLBJKB_02737at 2854.986 kb on - strand, within OHPLBJKB_02737at 2855.007 kb on - strand, within OHPLBJKB_02737at 2855.007 kb on - strand, within OHPLBJKB_02737at 2855.007 kb on - strand, within OHPLBJKB_02737at 2855.007 kb on - strand, within OHPLBJKB_02737at 2855.007 kb on - strand, within OHPLBJKB_02737at 2855.010 kb on - strand, within OHPLBJKB_02737at 2855.033 kb on + strandat 2855.033 kb on + strandat 2855.033 kb on + strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.034 kb on - strandat 2855.082 kb on + strandat 2855.082 kb on + strandat 2855.126 kb on + strandat 2855.127 kb on - strandat 2855.127 kb on - strandat 2855.237 kb on + strandat 2855.240 kb on + strandat 2855.418 kb on + strandat 2855.418 kb on + strandat 2855.418 kb on + strandat 2855.419 kb on - strandat 2855.475 kb on + strand, within OHPLBJKB_02738at 2855.476 kb on - strand, within OHPLBJKB_02738at 2855.752 kb on - strand, within OHPLBJKB_02738at 2855.752 kb on - strand, within OHPLBJKB_02738at 2855.760 kb on + strand, within OHPLBJKB_02738at 2855.760 kb on + strand, within OHPLBJKB_02738at 2855.761 kb on - strand, within OHPLBJKB_02738at 2855.801 kb on + strand, within OHPLBJKB_02738at 2856.011 kb on + strand, within OHPLBJKB_02738at 2856.017 kb on + strand, within OHPLBJKB_02738at 2856.017 kb on + strand, within OHPLBJKB_02738at 2856.087 kb on - strand, within OHPLBJKB_02738at 2856.160 kb on - strand, within OHPLBJKB_02738at 2856.160 kb on - strand, within OHPLBJKB_02738at 2856.160 kb on - strand, within OHPLBJKB_02738at 2856.220 kb on + strand, within OHPLBJKB_02738at 2856.251 kb on + strand, within OHPLBJKB_02738at 2856.293 kb on + strand, within OHPLBJKB_02738at 2856.333 kb on - strand, within OHPLBJKB_02738at 2856.413 kb on - strandat 2856.462 kb on - strandat 2856.462 kb on - strandat 2856.502 kb on - strandat 2856.509 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction T4 MOI1
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2,854,373 + OHPLBJKB_02737 0.31 -0.2
2,854,373 + OHPLBJKB_02737 0.31 -1.1
2,854,374 - OHPLBJKB_02737 0.31 +0.1
2,854,374 - OHPLBJKB_02737 0.31 -0.2
2,854,409 + OHPLBJKB_02737 0.34 -1.8
2,854,409 + OHPLBJKB_02737 0.34 +1.0
2,854,409 + OHPLBJKB_02737 0.34 -0.9
2,854,421 + OHPLBJKB_02737 0.35 +0.0
2,854,422 - OHPLBJKB_02737 0.35 +0.5
2,854,437 - OHPLBJKB_02737 0.36 -1.0
2,854,445 - OHPLBJKB_02737 0.37 -0.2
2,854,469 - OHPLBJKB_02737 0.39 +0.6
2,854,469 - OHPLBJKB_02737 0.39 +0.7
2,854,517 - OHPLBJKB_02737 0.44 +0.1
2,854,520 + OHPLBJKB_02737 0.44 +0.4
2,854,520 + OHPLBJKB_02737 0.44 +0.8
2,854,521 - OHPLBJKB_02737 0.44 +0.2
2,854,525 + OHPLBJKB_02737 0.45 +0.2
2,854,526 - OHPLBJKB_02737 0.45 -0.3
2,854,575 - OHPLBJKB_02737 0.49 -0.1
2,854,582 + OHPLBJKB_02737 0.50 -0.1
2,854,637 - OHPLBJKB_02737 0.55 +0.3
2,854,663 + OHPLBJKB_02737 0.57 +0.9
2,854,676 + OHPLBJKB_02737 0.58 +0.8
2,854,764 - OHPLBJKB_02737 0.66 +0.7
2,854,781 + OHPLBJKB_02737 0.68 -0.2
2,854,782 - OHPLBJKB_02737 0.68 +0.3
2,854,797 - OHPLBJKB_02737 0.70 -0.4
2,854,832 - OHPLBJKB_02737 0.73 +0.4
2,854,881 + OHPLBJKB_02737 0.77 +0.3
2,854,929 - OHPLBJKB_02737 0.82 +0.3
2,854,929 - OHPLBJKB_02737 0.82 -0.2
2,854,953 + OHPLBJKB_02737 0.84 -0.1
2,854,953 + OHPLBJKB_02737 0.84 +0.5
2,854,953 + OHPLBJKB_02737 0.84 -0.6
2,854,954 - OHPLBJKB_02737 0.84 +0.3
2,854,954 - OHPLBJKB_02737 0.84 -1.0
2,854,954 - OHPLBJKB_02737 0.84 -0.7
2,854,985 + OHPLBJKB_02737 0.87 +0.1
2,854,986 - OHPLBJKB_02737 0.87 +0.0
2,854,986 - OHPLBJKB_02737 0.87 -0.3
2,855,007 - OHPLBJKB_02737 0.89 -0.2
2,855,007 - OHPLBJKB_02737 0.89 -0.2
2,855,007 - OHPLBJKB_02737 0.89 +0.7
2,855,007 - OHPLBJKB_02737 0.89 -0.5
2,855,007 - OHPLBJKB_02737 0.89 -1.1
2,855,010 - OHPLBJKB_02737 0.89 -0.2
2,855,033 + +0.4
2,855,033 + +1.2
2,855,033 + -1.1
2,855,034 - -0.2
2,855,034 - +0.0
2,855,034 - -0.1
2,855,034 - +0.1
2,855,034 - +0.2
2,855,034 - +0.3
2,855,034 - +1.4
2,855,034 - +0.2
2,855,034 - -0.1
2,855,082 + +0.4
2,855,082 + -0.3
2,855,126 + -0.1
2,855,127 - +0.2
2,855,127 - +0.7
2,855,237 + -0.2
2,855,240 + +0.1
2,855,418 + -0.6
2,855,418 + +0.6
2,855,418 + +0.5
2,855,419 - -0.4
2,855,475 + OHPLBJKB_02738 0.14 -1.2
2,855,476 - OHPLBJKB_02738 0.14 +0.8
2,855,752 - OHPLBJKB_02738 0.37 -0.5
2,855,752 - OHPLBJKB_02738 0.37 +0.3
2,855,760 + OHPLBJKB_02738 0.38 +1.8
2,855,760 + OHPLBJKB_02738 0.38 +0.2
2,855,761 - OHPLBJKB_02738 0.38 -0.5
2,855,801 + OHPLBJKB_02738 0.41 -0.9
2,856,011 + OHPLBJKB_02738 0.59 -0.6
2,856,017 + OHPLBJKB_02738 0.59 -0.9
2,856,017 + OHPLBJKB_02738 0.59 +0.5
2,856,087 - OHPLBJKB_02738 0.65 -0.5
2,856,160 - OHPLBJKB_02738 0.71 +0.0
2,856,160 - OHPLBJKB_02738 0.71 +0.8
2,856,160 - OHPLBJKB_02738 0.71 -0.4
2,856,220 + OHPLBJKB_02738 0.76 -0.3
2,856,251 + OHPLBJKB_02738 0.79 -1.0
2,856,293 + OHPLBJKB_02738 0.82 -0.5
2,856,333 - OHPLBJKB_02738 0.86 +0.8
2,856,413 - -0.5
2,856,462 - -1.0
2,856,462 - -0.1
2,856,502 - +1.2
2,856,509 - -0.1

Or see this region's nucleotide sequence