Experiment: T4 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02362 and OHPLBJKB_02363 are separated by 110 nucleotides OHPLBJKB_02363 and OHPLBJKB_02364 are separated by 44 nucleotides
OHPLBJKB_02362: OHPLBJKB_02362 - HTH-type transcriptional repressor PurR, at 2,471,232 to 2,472,230
_02362
OHPLBJKB_02363: OHPLBJKB_02363 - Outer membrane protein G, at 2,472,341 to 2,473,246
_02363
OHPLBJKB_02364: OHPLBJKB_02364 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 2,473,291 to 2,474,373
_02364
Position (kb)
2472
2473
2474 Strain fitness (log2 ratio)
-1
0
1 at 2471.345 kb on - strand, within OHPLBJKB_02362 at 2471.368 kb on - strand, within OHPLBJKB_02362 at 2471.527 kb on + strand, within OHPLBJKB_02362 at 2471.531 kb on - strand, within OHPLBJKB_02362 at 2471.845 kb on - strand, within OHPLBJKB_02362 at 2471.847 kb on - strand, within OHPLBJKB_02362 at 2472.423 kb on + strand at 2472.424 kb on - strand at 2472.471 kb on - strand, within OHPLBJKB_02363 at 2472.476 kb on + strand, within OHPLBJKB_02363 at 2472.508 kb on + strand, within OHPLBJKB_02363 at 2472.529 kb on + strand, within OHPLBJKB_02363 at 2472.672 kb on + strand, within OHPLBJKB_02363 at 2472.673 kb on - strand, within OHPLBJKB_02363 at 2472.706 kb on + strand, within OHPLBJKB_02363 at 2472.706 kb on + strand, within OHPLBJKB_02363 at 2472.707 kb on - strand, within OHPLBJKB_02363 at 2472.708 kb on + strand, within OHPLBJKB_02363 at 2472.780 kb on + strand, within OHPLBJKB_02363 at 2472.903 kb on + strand, within OHPLBJKB_02363 at 2472.903 kb on + strand, within OHPLBJKB_02363 at 2472.904 kb on - strand, within OHPLBJKB_02363 at 2472.904 kb on - strand, within OHPLBJKB_02363 at 2473.013 kb on - strand, within OHPLBJKB_02363 at 2473.035 kb on + strand, within OHPLBJKB_02363 at 2473.039 kb on - strand, within OHPLBJKB_02363 at 2473.137 kb on - strand, within OHPLBJKB_02363 at 2473.689 kb on + strand, within OHPLBJKB_02364 at 2473.704 kb on + strand, within OHPLBJKB_02364 at 2473.707 kb on - strand, within OHPLBJKB_02364 at 2473.726 kb on + strand, within OHPLBJKB_02364 at 2473.727 kb on - strand, within OHPLBJKB_02364 at 2473.805 kb on + strand, within OHPLBJKB_02364 at 2473.805 kb on + strand, within OHPLBJKB_02364 at 2473.805 kb on + strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.806 kb on - strand, within OHPLBJKB_02364 at 2473.904 kb on - strand, within OHPLBJKB_02364 at 2473.984 kb on - strand, within OHPLBJKB_02364 at 2473.994 kb on + strand, within OHPLBJKB_02364 at 2474.112 kb on - strand, within OHPLBJKB_02364 at 2474.120 kb on + strand, within OHPLBJKB_02364 at 2474.121 kb on - strand, within OHPLBJKB_02364 at 2474.140 kb on + strand, within OHPLBJKB_02364 at 2474.140 kb on + strand, within OHPLBJKB_02364 at 2474.141 kb on - strand, within OHPLBJKB_02364
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI1 remove 2,471,345 - OHPLBJKB_02362 0.11 -0.2 2,471,368 - OHPLBJKB_02362 0.14 -0.1 2,471,527 + OHPLBJKB_02362 0.30 -0.2 2,471,531 - OHPLBJKB_02362 0.30 -0.5 2,471,845 - OHPLBJKB_02362 0.61 -0.9 2,471,847 - OHPLBJKB_02362 0.62 -1.1 2,472,423 + -0.6 2,472,424 - +0.0 2,472,471 - OHPLBJKB_02363 0.14 -1.4 2,472,476 + OHPLBJKB_02363 0.15 +0.0 2,472,508 + OHPLBJKB_02363 0.18 -0.1 2,472,529 + OHPLBJKB_02363 0.21 -1.2 2,472,672 + OHPLBJKB_02363 0.37 -1.4 2,472,673 - OHPLBJKB_02363 0.37 -0.9 2,472,706 + OHPLBJKB_02363 0.40 -0.2 2,472,706 + OHPLBJKB_02363 0.40 -1.3 2,472,707 - OHPLBJKB_02363 0.40 -0.7 2,472,708 + OHPLBJKB_02363 0.41 -1.2 2,472,780 + OHPLBJKB_02363 0.48 +1.1 2,472,903 + OHPLBJKB_02363 0.62 +0.7 2,472,903 + OHPLBJKB_02363 0.62 -0.5 2,472,904 - OHPLBJKB_02363 0.62 +0.7 2,472,904 - OHPLBJKB_02363 0.62 +1.4 2,473,013 - OHPLBJKB_02363 0.74 -1.6 2,473,035 + OHPLBJKB_02363 0.77 +0.0 2,473,039 - OHPLBJKB_02363 0.77 -0.2 2,473,137 - OHPLBJKB_02363 0.88 -1.3 2,473,689 + OHPLBJKB_02364 0.37 +1.2 2,473,704 + OHPLBJKB_02364 0.38 +0.7 2,473,707 - OHPLBJKB_02364 0.38 +0.5 2,473,726 + OHPLBJKB_02364 0.40 +1.0 2,473,727 - OHPLBJKB_02364 0.40 -0.1 2,473,805 + OHPLBJKB_02364 0.47 +0.3 2,473,805 + OHPLBJKB_02364 0.47 -0.4 2,473,805 + OHPLBJKB_02364 0.47 -0.9 2,473,806 - OHPLBJKB_02364 0.48 +1.0 2,473,806 - OHPLBJKB_02364 0.48 -0.7 2,473,806 - OHPLBJKB_02364 0.48 +1.0 2,473,806 - OHPLBJKB_02364 0.48 -0.3 2,473,806 - OHPLBJKB_02364 0.48 +0.2 2,473,806 - OHPLBJKB_02364 0.48 -0.4 2,473,806 - OHPLBJKB_02364 0.48 -1.3 2,473,904 - OHPLBJKB_02364 0.57 -0.4 2,473,984 - OHPLBJKB_02364 0.64 -0.1 2,473,994 + OHPLBJKB_02364 0.65 -0.9 2,474,112 - OHPLBJKB_02364 0.76 +0.0 2,474,120 + OHPLBJKB_02364 0.77 +0.2 2,474,121 - OHPLBJKB_02364 0.77 -0.2 2,474,140 + OHPLBJKB_02364 0.78 -1.0 2,474,140 + OHPLBJKB_02364 0.78 -0.5 2,474,141 - OHPLBJKB_02364 0.78 -0.8
Or see this region's nucleotide sequence