Experiment: T4 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02319 and OHPLBJKB_02320 are separated by 7 nucleotides OHPLBJKB_02320 and OHPLBJKB_02321 are separated by 14 nucleotides OHPLBJKB_02321 and OHPLBJKB_02322 are separated by 8 nucleotides
OHPLBJKB_02319: OHPLBJKB_02319 - 1,2-phenylacetyl-CoA epoxidase, subunit E, at 2,421,951 to 2,423,021
_02319
OHPLBJKB_02320: OHPLBJKB_02320 - Putative 1,2-phenylacetyl-CoA epoxidase, subunit D, at 2,423,029 to 2,423,526
_02320
OHPLBJKB_02321: OHPLBJKB_02321 - 1,2-phenylacetyl-CoA epoxidase, subunit C, at 2,423,541 to 2,424,287
_02321
OHPLBJKB_02322: OHPLBJKB_02322 - 1,2-phenylacetyl-CoA epoxidase, subunit B, at 2,424,296 to 2,424,583
_02322
Position (kb)
2423
2424 Strain fitness (log2 ratio)
-2
-1
0
1 at 2422.191 kb on - strand, within OHPLBJKB_02319 at 2422.224 kb on + strand, within OHPLBJKB_02319 at 2422.225 kb on - strand, within OHPLBJKB_02319 at 2422.225 kb on - strand, within OHPLBJKB_02319 at 2422.225 kb on - strand, within OHPLBJKB_02319 at 2422.379 kb on + strand, within OHPLBJKB_02319 at 2422.379 kb on + strand, within OHPLBJKB_02319 at 2422.380 kb on - strand, within OHPLBJKB_02319 at 2422.380 kb on - strand, within OHPLBJKB_02319 at 2422.380 kb on - strand, within OHPLBJKB_02319 at 2422.520 kb on - strand, within OHPLBJKB_02319 at 2422.520 kb on - strand, within OHPLBJKB_02319 at 2422.520 kb on - strand, within OHPLBJKB_02319 at 2422.571 kb on + strand, within OHPLBJKB_02319 at 2422.572 kb on - strand, within OHPLBJKB_02319 at 2422.582 kb on + strand, within OHPLBJKB_02319 at 2422.582 kb on + strand, within OHPLBJKB_02319 at 2422.583 kb on - strand, within OHPLBJKB_02319 at 2422.650 kb on - strand, within OHPLBJKB_02319 at 2422.653 kb on - strand, within OHPLBJKB_02319 at 2422.749 kb on - strand, within OHPLBJKB_02319 at 2422.818 kb on - strand, within OHPLBJKB_02319 at 2422.834 kb on + strand, within OHPLBJKB_02319 at 2422.834 kb on + strand, within OHPLBJKB_02319 at 2422.835 kb on - strand, within OHPLBJKB_02319 at 2422.835 kb on - strand, within OHPLBJKB_02319 at 2422.955 kb on + strand at 2422.956 kb on - strand at 2423.035 kb on - strand at 2423.035 kb on - strand at 2423.067 kb on + strand at 2423.067 kb on + strand at 2423.068 kb on - strand at 2423.078 kb on + strand at 2423.116 kb on - strand, within OHPLBJKB_02320 at 2423.152 kb on + strand, within OHPLBJKB_02320 at 2423.152 kb on + strand, within OHPLBJKB_02320 at 2423.321 kb on - strand, within OHPLBJKB_02320 at 2423.360 kb on + strand, within OHPLBJKB_02320 at 2423.371 kb on - strand, within OHPLBJKB_02320 at 2423.483 kb on - strand at 2423.543 kb on - strand at 2423.658 kb on + strand, within OHPLBJKB_02321 at 2423.738 kb on + strand, within OHPLBJKB_02321 at 2423.838 kb on + strand, within OHPLBJKB_02321 at 2423.838 kb on + strand, within OHPLBJKB_02321 at 2423.839 kb on - strand, within OHPLBJKB_02321 at 2423.847 kb on - strand, within OHPLBJKB_02321 at 2423.906 kb on + strand, within OHPLBJKB_02321 at 2423.907 kb on - strand, within OHPLBJKB_02321 at 2423.996 kb on - strand, within OHPLBJKB_02321 at 2423.996 kb on - strand, within OHPLBJKB_02321 at 2423.996 kb on - strand, within OHPLBJKB_02321 at 2424.048 kb on + strand, within OHPLBJKB_02321 at 2424.048 kb on + strand, within OHPLBJKB_02321 at 2424.048 kb on + strand, within OHPLBJKB_02321 at 2424.048 kb on + strand, within OHPLBJKB_02321 at 2424.049 kb on - strand, within OHPLBJKB_02321 at 2424.049 kb on - strand, within OHPLBJKB_02321 at 2424.049 kb on - strand, within OHPLBJKB_02321 at 2424.268 kb on + strand at 2424.269 kb on - strand at 2424.328 kb on - strand, within OHPLBJKB_02322 at 2424.456 kb on + strand, within OHPLBJKB_02322 at 2424.456 kb on + strand, within OHPLBJKB_02322 at 2424.503 kb on + strand, within OHPLBJKB_02322 at 2424.503 kb on + strand, within OHPLBJKB_02322
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI1 remove 2,422,191 - OHPLBJKB_02319 0.22 +0.4 2,422,224 + OHPLBJKB_02319 0.25 -0.1 2,422,225 - OHPLBJKB_02319 0.26 +0.8 2,422,225 - OHPLBJKB_02319 0.26 -0.8 2,422,225 - OHPLBJKB_02319 0.26 -0.5 2,422,379 + OHPLBJKB_02319 0.40 +0.4 2,422,379 + OHPLBJKB_02319 0.40 +0.8 2,422,380 - OHPLBJKB_02319 0.40 -0.2 2,422,380 - OHPLBJKB_02319 0.40 +0.2 2,422,380 - OHPLBJKB_02319 0.40 -0.2 2,422,520 - OHPLBJKB_02319 0.53 +0.4 2,422,520 - OHPLBJKB_02319 0.53 -0.5 2,422,520 - OHPLBJKB_02319 0.53 -0.5 2,422,571 + OHPLBJKB_02319 0.58 +0.4 2,422,572 - OHPLBJKB_02319 0.58 +0.7 2,422,582 + OHPLBJKB_02319 0.59 -1.0 2,422,582 + OHPLBJKB_02319 0.59 +1.3 2,422,583 - OHPLBJKB_02319 0.59 -1.6 2,422,650 - OHPLBJKB_02319 0.65 +0.4 2,422,653 - OHPLBJKB_02319 0.66 -0.1 2,422,749 - OHPLBJKB_02319 0.75 +0.5 2,422,818 - OHPLBJKB_02319 0.81 -0.9 2,422,834 + OHPLBJKB_02319 0.82 +1.5 2,422,834 + OHPLBJKB_02319 0.82 -0.1 2,422,835 - OHPLBJKB_02319 0.83 +0.9 2,422,835 - OHPLBJKB_02319 0.83 +0.7 2,422,955 + +0.3 2,422,956 - -1.3 2,423,035 - -0.5 2,423,035 - -0.7 2,423,067 + +1.5 2,423,067 + -0.1 2,423,068 - -0.2 2,423,078 + +1.2 2,423,116 - OHPLBJKB_02320 0.17 -0.5 2,423,152 + OHPLBJKB_02320 0.25 +0.1 2,423,152 + OHPLBJKB_02320 0.25 -2.1 2,423,321 - OHPLBJKB_02320 0.59 -0.5 2,423,360 + OHPLBJKB_02320 0.66 -0.2 2,423,371 - OHPLBJKB_02320 0.69 -0.5 2,423,483 - +0.2 2,423,543 - +0.2 2,423,658 + OHPLBJKB_02321 0.16 +0.6 2,423,738 + OHPLBJKB_02321 0.26 +0.4 2,423,838 + OHPLBJKB_02321 0.40 -0.9 2,423,838 + OHPLBJKB_02321 0.40 +0.3 2,423,839 - OHPLBJKB_02321 0.40 -0.8 2,423,847 - OHPLBJKB_02321 0.41 +0.5 2,423,906 + OHPLBJKB_02321 0.49 +0.2 2,423,907 - OHPLBJKB_02321 0.49 -0.4 2,423,996 - OHPLBJKB_02321 0.61 -0.5 2,423,996 - OHPLBJKB_02321 0.61 +0.6 2,423,996 - OHPLBJKB_02321 0.61 -1.6 2,424,048 + OHPLBJKB_02321 0.68 -0.4 2,424,048 + OHPLBJKB_02321 0.68 -0.3 2,424,048 + OHPLBJKB_02321 0.68 -0.1 2,424,048 + OHPLBJKB_02321 0.68 +0.7 2,424,049 - OHPLBJKB_02321 0.68 -0.9 2,424,049 - OHPLBJKB_02321 0.68 -0.4 2,424,049 - OHPLBJKB_02321 0.68 +0.0 2,424,268 + -0.8 2,424,269 - -0.9 2,424,328 - OHPLBJKB_02322 0.11 +0.5 2,424,456 + OHPLBJKB_02322 0.56 +1.1 2,424,456 + OHPLBJKB_02322 0.56 +0.6 2,424,503 + OHPLBJKB_02322 0.72 +0.1 2,424,503 + OHPLBJKB_02322 0.72 +0.6
Or see this region's nucleotide sequence