Experiment: T4 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01977 and OHPLBJKB_01978 overlap by 28 nucleotides OHPLBJKB_01978 and OHPLBJKB_01979 are separated by 9 nucleotides OHPLBJKB_01979 and OHPLBJKB_01980 overlap by 1 nucleotides
OHPLBJKB_01977: OHPLBJKB_01977 - Inner membrane ABC transporter permease protein YnjC, at 2,053,797 to 2,055,332
_01977
OHPLBJKB_01978: OHPLBJKB_01978 - Protein YnjB, at 2,055,305 to 2,056,471
_01978
OHPLBJKB_01979: OHPLBJKB_01979 - hypothetical protein, at 2,056,481 to 2,057,029
_01979
OHPLBJKB_01980: OHPLBJKB_01980 - TVP38/TMEM64 family inner membrane protein YdjZ, at 2,057,029 to 2,057,736
_01980
Position (kb)
2055
2056
2057 Strain fitness (log2 ratio)
-1
0
1 at 2054.399 kb on + strand, within OHPLBJKB_01977 at 2054.523 kb on + strand, within OHPLBJKB_01977 at 2054.524 kb on - strand, within OHPLBJKB_01977 at 2054.534 kb on + strand, within OHPLBJKB_01977 at 2054.563 kb on + strand, within OHPLBJKB_01977 at 2054.564 kb on - strand, within OHPLBJKB_01977 at 2054.564 kb on - strand, within OHPLBJKB_01977 at 2054.578 kb on + strand, within OHPLBJKB_01977 at 2054.590 kb on - strand, within OHPLBJKB_01977 at 2054.666 kb on + strand, within OHPLBJKB_01977 at 2054.667 kb on - strand, within OHPLBJKB_01977 at 2054.691 kb on - strand, within OHPLBJKB_01977 at 2054.819 kb on - strand, within OHPLBJKB_01977 at 2054.974 kb on + strand, within OHPLBJKB_01977 at 2054.980 kb on + strand, within OHPLBJKB_01977 at 2054.980 kb on + strand, within OHPLBJKB_01977 at 2055.071 kb on + strand, within OHPLBJKB_01977 at 2055.071 kb on + strand, within OHPLBJKB_01977 at 2055.072 kb on - strand, within OHPLBJKB_01977 at 2055.072 kb on - strand, within OHPLBJKB_01977 at 2055.072 kb on - strand, within OHPLBJKB_01977 at 2055.072 kb on - strand, within OHPLBJKB_01977 at 2055.072 kb on - strand, within OHPLBJKB_01977 at 2055.072 kb on - strand, within OHPLBJKB_01977 at 2055.171 kb on + strand, within OHPLBJKB_01977 at 2055.271 kb on + strand at 2055.272 kb on - strand at 2055.313 kb on + strand at 2055.326 kb on + strand at 2055.327 kb on - strand at 2055.350 kb on + strand at 2055.527 kb on + strand, within OHPLBJKB_01978 at 2055.527 kb on + strand, within OHPLBJKB_01978 at 2055.528 kb on - strand, within OHPLBJKB_01978 at 2055.528 kb on - strand, within OHPLBJKB_01978 at 2055.615 kb on + strand, within OHPLBJKB_01978 at 2055.615 kb on + strand, within OHPLBJKB_01978 at 2055.763 kb on - strand, within OHPLBJKB_01978 at 2055.784 kb on - strand, within OHPLBJKB_01978 at 2055.865 kb on + strand, within OHPLBJKB_01978 at 2055.919 kb on - strand, within OHPLBJKB_01978 at 2055.988 kb on + strand, within OHPLBJKB_01978 at 2056.095 kb on + strand, within OHPLBJKB_01978 at 2056.151 kb on + strand, within OHPLBJKB_01978 at 2056.151 kb on + strand, within OHPLBJKB_01978 at 2056.152 kb on - strand, within OHPLBJKB_01978 at 2056.208 kb on - strand, within OHPLBJKB_01978 at 2056.208 kb on - strand, within OHPLBJKB_01978 at 2056.483 kb on - strand at 2056.541 kb on - strand, within OHPLBJKB_01979 at 2056.541 kb on - strand, within OHPLBJKB_01979 at 2056.541 kb on - strand, within OHPLBJKB_01979 at 2056.844 kb on + strand, within OHPLBJKB_01979 at 2056.844 kb on + strand, within OHPLBJKB_01979 at 2056.845 kb on - strand, within OHPLBJKB_01979 at 2056.845 kb on - strand, within OHPLBJKB_01979 at 2056.906 kb on - strand, within OHPLBJKB_01979 at 2056.906 kb on - strand, within OHPLBJKB_01979 at 2056.906 kb on - strand, within OHPLBJKB_01979 at 2057.074 kb on - strand at 2057.104 kb on - strand, within OHPLBJKB_01980 at 2057.140 kb on + strand, within OHPLBJKB_01980 at 2057.141 kb on - strand, within OHPLBJKB_01980 at 2057.141 kb on - strand, within OHPLBJKB_01980 at 2057.162 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.169 kb on + strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.170 kb on - strand, within OHPLBJKB_01980 at 2057.243 kb on + strand, within OHPLBJKB_01980 at 2057.244 kb on - strand, within OHPLBJKB_01980
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI1 remove 2,054,399 + OHPLBJKB_01977 0.39 -0.6 2,054,523 + OHPLBJKB_01977 0.47 +0.4 2,054,524 - OHPLBJKB_01977 0.47 -0.1 2,054,534 + OHPLBJKB_01977 0.48 +0.5 2,054,563 + OHPLBJKB_01977 0.50 -0.9 2,054,564 - OHPLBJKB_01977 0.50 -0.4 2,054,564 - OHPLBJKB_01977 0.50 +0.2 2,054,578 + OHPLBJKB_01977 0.51 -0.4 2,054,590 - OHPLBJKB_01977 0.52 -0.2 2,054,666 + OHPLBJKB_01977 0.57 +0.7 2,054,667 - OHPLBJKB_01977 0.57 +0.5 2,054,691 - OHPLBJKB_01977 0.58 -0.7 2,054,819 - OHPLBJKB_01977 0.67 -0.3 2,054,974 + OHPLBJKB_01977 0.77 +0.9 2,054,980 + OHPLBJKB_01977 0.77 -0.0 2,054,980 + OHPLBJKB_01977 0.77 -1.3 2,055,071 + OHPLBJKB_01977 0.83 +1.0 2,055,071 + OHPLBJKB_01977 0.83 +0.7 2,055,072 - OHPLBJKB_01977 0.83 -1.4 2,055,072 - OHPLBJKB_01977 0.83 +0.6 2,055,072 - OHPLBJKB_01977 0.83 -1.1 2,055,072 - OHPLBJKB_01977 0.83 +1.2 2,055,072 - OHPLBJKB_01977 0.83 +0.5 2,055,072 - OHPLBJKB_01977 0.83 +0.3 2,055,171 + OHPLBJKB_01977 0.89 -0.5 2,055,271 + +0.2 2,055,272 - +0.3 2,055,313 + +0.2 2,055,326 + +1.3 2,055,327 - +0.6 2,055,350 + -1.7 2,055,527 + OHPLBJKB_01978 0.19 -0.8 2,055,527 + OHPLBJKB_01978 0.19 +0.2 2,055,528 - OHPLBJKB_01978 0.19 -1.1 2,055,528 - OHPLBJKB_01978 0.19 -0.6 2,055,615 + OHPLBJKB_01978 0.27 -1.6 2,055,615 + OHPLBJKB_01978 0.27 -1.1 2,055,763 - OHPLBJKB_01978 0.39 -0.6 2,055,784 - OHPLBJKB_01978 0.41 -0.3 2,055,865 + OHPLBJKB_01978 0.48 -0.2 2,055,919 - OHPLBJKB_01978 0.53 +0.4 2,055,988 + OHPLBJKB_01978 0.59 -0.1 2,056,095 + OHPLBJKB_01978 0.68 -1.1 2,056,151 + OHPLBJKB_01978 0.72 -0.2 2,056,151 + OHPLBJKB_01978 0.72 +0.9 2,056,152 - OHPLBJKB_01978 0.73 -1.7 2,056,208 - OHPLBJKB_01978 0.77 -0.7 2,056,208 - OHPLBJKB_01978 0.77 +0.1 2,056,483 - +0.5 2,056,541 - OHPLBJKB_01979 0.11 +0.1 2,056,541 - OHPLBJKB_01979 0.11 -0.1 2,056,541 - OHPLBJKB_01979 0.11 -0.5 2,056,844 + OHPLBJKB_01979 0.66 +0.0 2,056,844 + OHPLBJKB_01979 0.66 -0.6 2,056,845 - OHPLBJKB_01979 0.66 -0.7 2,056,845 - OHPLBJKB_01979 0.66 -0.1 2,056,906 - OHPLBJKB_01979 0.77 -0.7 2,056,906 - OHPLBJKB_01979 0.77 -0.3 2,056,906 - OHPLBJKB_01979 0.77 +0.3 2,057,074 - +0.1 2,057,104 - OHPLBJKB_01980 0.11 -0.7 2,057,140 + OHPLBJKB_01980 0.16 -0.4 2,057,141 - OHPLBJKB_01980 0.16 +0.1 2,057,141 - OHPLBJKB_01980 0.16 -1.6 2,057,162 + OHPLBJKB_01980 0.19 +0.3 2,057,169 + OHPLBJKB_01980 0.20 +0.6 2,057,169 + OHPLBJKB_01980 0.20 -0.9 2,057,169 + OHPLBJKB_01980 0.20 +1.0 2,057,169 + OHPLBJKB_01980 0.20 +1.1 2,057,169 + OHPLBJKB_01980 0.20 +1.1 2,057,169 + OHPLBJKB_01980 0.20 +0.0 2,057,170 - OHPLBJKB_01980 0.20 -0.2 2,057,170 - OHPLBJKB_01980 0.20 +0.3 2,057,170 - OHPLBJKB_01980 0.20 -0.2 2,057,170 - OHPLBJKB_01980 0.20 -0.0 2,057,243 + OHPLBJKB_01980 0.30 -1.7 2,057,244 - OHPLBJKB_01980 0.30 -1.1
Or see this region's nucleotide sequence