Experiment: T4 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00100 and OHPLBJKB_00101 are separated by 11 nucleotides OHPLBJKB_00101 and OHPLBJKB_00102 overlap by 1 nucleotides OHPLBJKB_00102 and OHPLBJKB_00103 are separated by 229 nucleotides
OHPLBJKB_00100: OHPLBJKB_00100 - hypothetical protein, at 107,991 to 108,200
_00100
OHPLBJKB_00101: OHPLBJKB_00101 - Mannitol operon repressor, at 108,212 to 108,799
_00101
OHPLBJKB_00102: OHPLBJKB_00102 - Mannitol-1-phosphate 5-dehydrogenase, at 108,799 to 109,947
_00102
OHPLBJKB_00103: OHPLBJKB_00103 - PTS system mannitol-specific EIICBA component, at 110,177 to 112,090
_00103
Position (kb)
108
109
110 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 107.935 kb on + strand at 107.974 kb on - strand at 107.976 kb on + strand at 107.984 kb on + strand at 107.985 kb on - strand at 107.985 kb on - strand at 107.985 kb on - strand at 108.001 kb on + strand at 108.001 kb on + strand at 108.038 kb on - strand, within OHPLBJKB_00100 at 108.136 kb on + strand, within OHPLBJKB_00100 at 108.137 kb on - strand, within OHPLBJKB_00100 at 108.138 kb on + strand, within OHPLBJKB_00100 at 108.138 kb on + strand, within OHPLBJKB_00100 at 108.138 kb on + strand, within OHPLBJKB_00100 at 108.139 kb on - strand, within OHPLBJKB_00100 at 108.142 kb on + strand, within OHPLBJKB_00100 at 108.142 kb on + strand, within OHPLBJKB_00100 at 108.142 kb on + strand, within OHPLBJKB_00100 at 108.143 kb on - strand, within OHPLBJKB_00100 at 108.143 kb on - strand, within OHPLBJKB_00100 at 108.143 kb on - strand, within OHPLBJKB_00100 at 108.143 kb on - strand, within OHPLBJKB_00100 at 108.143 kb on - strand, within OHPLBJKB_00100 at 108.143 kb on - strand, within OHPLBJKB_00100 at 108.157 kb on - strand, within OHPLBJKB_00100 at 108.157 kb on - strand, within OHPLBJKB_00100 at 108.187 kb on + strand at 108.187 kb on + strand at 108.187 kb on + strand at 108.188 kb on - strand at 108.233 kb on + strand at 108.318 kb on + strand, within OHPLBJKB_00101 at 108.319 kb on - strand, within OHPLBJKB_00101 at 108.319 kb on - strand, within OHPLBJKB_00101 at 108.319 kb on - strand, within OHPLBJKB_00101 at 108.440 kb on + strand, within OHPLBJKB_00101 at 108.480 kb on + strand, within OHPLBJKB_00101 at 108.480 kb on + strand, within OHPLBJKB_00101 at 108.511 kb on - strand, within OHPLBJKB_00101 at 108.572 kb on + strand, within OHPLBJKB_00101 at 108.572 kb on + strand, within OHPLBJKB_00101 at 108.573 kb on - strand, within OHPLBJKB_00101 at 108.573 kb on - strand, within OHPLBJKB_00101 at 108.573 kb on - strand, within OHPLBJKB_00101 at 108.573 kb on - strand, within OHPLBJKB_00101 at 108.579 kb on + strand, within OHPLBJKB_00101 at 108.579 kb on + strand, within OHPLBJKB_00101 at 108.579 kb on + strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.580 kb on - strand, within OHPLBJKB_00101 at 108.608 kb on + strand, within OHPLBJKB_00101 at 108.749 kb on - strand at 108.813 kb on + strand at 108.813 kb on + strand at 108.813 kb on + strand at 108.967 kb on - strand, within OHPLBJKB_00102 at 108.985 kb on - strand, within OHPLBJKB_00102 at 109.070 kb on - strand, within OHPLBJKB_00102 at 109.131 kb on - strand, within OHPLBJKB_00102 at 109.161 kb on - strand, within OHPLBJKB_00102 at 109.175 kb on - strand, within OHPLBJKB_00102 at 109.285 kb on - strand, within OHPLBJKB_00102 at 109.285 kb on - strand, within OHPLBJKB_00102 at 109.285 kb on - strand, within OHPLBJKB_00102 at 109.285 kb on - strand, within OHPLBJKB_00102 at 109.285 kb on - strand, within OHPLBJKB_00102 at 109.443 kb on + strand, within OHPLBJKB_00102 at 109.510 kb on + strand, within OHPLBJKB_00102 at 109.665 kb on + strand, within OHPLBJKB_00102 at 109.777 kb on + strand, within OHPLBJKB_00102 at 109.804 kb on + strand, within OHPLBJKB_00102 at 109.804 kb on + strand, within OHPLBJKB_00102 at 109.805 kb on - strand, within OHPLBJKB_00102 at 109.805 kb on - strand, within OHPLBJKB_00102 at 109.815 kb on + strand, within OHPLBJKB_00102 at 109.815 kb on + strand, within OHPLBJKB_00102 at 109.815 kb on + strand, within OHPLBJKB_00102 at 109.840 kb on + strand at 109.950 kb on + strand at 109.953 kb on + strand at 110.050 kb on + strand at 110.068 kb on + strand at 110.109 kb on - strand at 110.118 kb on - strand at 110.179 kb on - strand at 110.179 kb on - strand at 110.182 kb on + strand at 110.183 kb on - strand at 110.183 kb on - strand at 110.314 kb on + strand at 110.315 kb on - strand at 110.500 kb on - strand, within OHPLBJKB_00103 at 110.500 kb on - strand, within OHPLBJKB_00103 at 110.500 kb on - strand, within OHPLBJKB_00103 at 110.618 kb on - strand, within OHPLBJKB_00103 at 110.658 kb on - strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.752 kb on + strand, within OHPLBJKB_00103 at 110.753 kb on - strand, within OHPLBJKB_00103 at 110.753 kb on - strand, within OHPLBJKB_00103 at 110.753 kb on - strand, within OHPLBJKB_00103 at 110.851 kb on + strand, within OHPLBJKB_00103 at 110.852 kb on - strand, within OHPLBJKB_00103 at 110.852 kb on - strand, within OHPLBJKB_00103 at 110.852 kb on - strand, within OHPLBJKB_00103 at 110.894 kb on - strand, within OHPLBJKB_00103
Per-strain Table
Position Strand Gene LocusTag Fraction T4 MOI1 remove 107,935 + -0.5 107,974 - +1.0 107,976 + -0.0 107,984 + -0.4 107,985 - +0.2 107,985 - +0.8 107,985 - -0.1 108,001 + -0.7 108,001 + +0.1 108,038 - OHPLBJKB_00100 0.22 -1.8 108,136 + OHPLBJKB_00100 0.69 -0.2 108,137 - OHPLBJKB_00100 0.70 +0.0 108,138 + OHPLBJKB_00100 0.70 -1.5 108,138 + OHPLBJKB_00100 0.70 -1.1 108,138 + OHPLBJKB_00100 0.70 -0.4 108,139 - OHPLBJKB_00100 0.70 +0.3 108,142 + OHPLBJKB_00100 0.72 -0.4 108,142 + OHPLBJKB_00100 0.72 -1.8 108,142 + OHPLBJKB_00100 0.72 +0.0 108,143 - OHPLBJKB_00100 0.72 -0.6 108,143 - OHPLBJKB_00100 0.72 -0.6 108,143 - OHPLBJKB_00100 0.72 +1.3 108,143 - OHPLBJKB_00100 0.72 +0.7 108,143 - OHPLBJKB_00100 0.72 -0.0 108,143 - OHPLBJKB_00100 0.72 +0.1 108,157 - OHPLBJKB_00100 0.79 -1.3 108,157 - OHPLBJKB_00100 0.79 -0.3 108,187 + +0.3 108,187 + +0.9 108,187 + -0.1 108,188 - +0.5 108,233 + -0.8 108,318 + OHPLBJKB_00101 0.18 -0.8 108,319 - OHPLBJKB_00101 0.18 +0.1 108,319 - OHPLBJKB_00101 0.18 -0.2 108,319 - OHPLBJKB_00101 0.18 +1.0 108,440 + OHPLBJKB_00101 0.39 +1.0 108,480 + OHPLBJKB_00101 0.46 -1.0 108,480 + OHPLBJKB_00101 0.46 +0.2 108,511 - OHPLBJKB_00101 0.51 -0.8 108,572 + OHPLBJKB_00101 0.61 -0.3 108,572 + OHPLBJKB_00101 0.61 +0.2 108,573 - OHPLBJKB_00101 0.61 -0.1 108,573 - OHPLBJKB_00101 0.61 -1.3 108,573 - OHPLBJKB_00101 0.61 -0.4 108,573 - OHPLBJKB_00101 0.61 -0.7 108,579 + OHPLBJKB_00101 0.62 +0.8 108,579 + OHPLBJKB_00101 0.62 -1.7 108,579 + OHPLBJKB_00101 0.62 -1.0 108,580 - OHPLBJKB_00101 0.63 +0.2 108,580 - OHPLBJKB_00101 0.63 +1.3 108,580 - OHPLBJKB_00101 0.63 +1.0 108,580 - OHPLBJKB_00101 0.63 -0.0 108,580 - OHPLBJKB_00101 0.63 +0.2 108,580 - OHPLBJKB_00101 0.63 +0.3 108,580 - OHPLBJKB_00101 0.63 -0.5 108,580 - OHPLBJKB_00101 0.63 +0.0 108,608 + OHPLBJKB_00101 0.67 -0.1 108,749 - +0.5 108,813 + -1.0 108,813 + -0.5 108,813 + +0.9 108,967 - OHPLBJKB_00102 0.15 -0.5 108,985 - OHPLBJKB_00102 0.16 -0.5 109,070 - OHPLBJKB_00102 0.24 -1.2 109,131 - OHPLBJKB_00102 0.29 -0.3 109,161 - OHPLBJKB_00102 0.32 -0.3 109,175 - OHPLBJKB_00102 0.33 +1.3 109,285 - OHPLBJKB_00102 0.42 -1.0 109,285 - OHPLBJKB_00102 0.42 -2.0 109,285 - OHPLBJKB_00102 0.42 +1.3 109,285 - OHPLBJKB_00102 0.42 +2.0 109,285 - OHPLBJKB_00102 0.42 -1.1 109,443 + OHPLBJKB_00102 0.56 +0.0 109,510 + OHPLBJKB_00102 0.62 -0.5 109,665 + OHPLBJKB_00102 0.75 -0.5 109,777 + OHPLBJKB_00102 0.85 -0.5 109,804 + OHPLBJKB_00102 0.87 -1.7 109,804 + OHPLBJKB_00102 0.87 -1.3 109,805 - OHPLBJKB_00102 0.88 +0.2 109,805 - OHPLBJKB_00102 0.88 -0.5 109,815 + OHPLBJKB_00102 0.88 -1.1 109,815 + OHPLBJKB_00102 0.88 +1.0 109,815 + OHPLBJKB_00102 0.88 -0.9 109,840 + +0.3 109,950 + -0.5 109,953 + -0.5 110,050 + -3.0 110,068 + +0.5 110,109 - +0.9 110,118 - +0.3 110,179 - -0.8 110,179 - +0.3 110,182 + -0.1 110,183 - -1.3 110,183 - +0.2 110,314 + +0.3 110,315 - -0.1 110,500 - OHPLBJKB_00103 0.17 +1.0 110,500 - OHPLBJKB_00103 0.17 +0.9 110,500 - OHPLBJKB_00103 0.17 +0.8 110,618 - OHPLBJKB_00103 0.23 -0.4 110,658 - OHPLBJKB_00103 0.25 +1.3 110,752 + OHPLBJKB_00103 0.30 +1.6 110,752 + OHPLBJKB_00103 0.30 +0.4 110,752 + OHPLBJKB_00103 0.30 -0.4 110,752 + OHPLBJKB_00103 0.30 -0.3 110,752 + OHPLBJKB_00103 0.30 +0.2 110,752 + OHPLBJKB_00103 0.30 -0.8 110,752 + OHPLBJKB_00103 0.30 -1.0 110,753 - OHPLBJKB_00103 0.30 +0.1 110,753 - OHPLBJKB_00103 0.30 -0.0 110,753 - OHPLBJKB_00103 0.30 +0.2 110,851 + OHPLBJKB_00103 0.35 +0.3 110,852 - OHPLBJKB_00103 0.35 -0.5 110,852 - OHPLBJKB_00103 0.35 -0.4 110,852 - OHPLBJKB_00103 0.35 +1.0 110,894 - OHPLBJKB_00103 0.37 -1.3
Or see this region's nucleotide sequence