Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10935

Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan) (C)
2,932,040	+		ABI39_RS10930	0.73	-2.1
2,932,109	-		ABI39_RS10930	0.76	+0.3
2,932,208	-		ABI39_RS10930	0.79	+0.4
2,932,235	-		ABI39_RS10930	0.80	-0.2
2,932,264	-		ABI39_RS10930	0.81	+0.7
2,932,399	+		ABI39_RS10930	0.85	-0.1
2,932,519	-		ABI39_RS10930	0.89	+0.6
2,932,550	+				-0.3
2,932,564	+				-1.3
2,932,642	+				-0.0
2,932,689	-				-0.3
2,932,689	-				+0.9
2,932,757	-				-0.6
2,932,796	-				-0.4
2,932,847	+				-0.2
2,932,859	-				+0.9
2,932,869	+				+0.2
2,932,882	-				+0.1
2,932,938	+				+0.2
2,933,028	-		ABI39_RS10935	0.11	+0.9
2,933,030	-		ABI39_RS10935	0.11	+1.0
2,933,109	+		ABI39_RS10935	0.16	-0.6
2,933,167	+		ABI39_RS10935	0.19	-0.0
2,933,189	+		ABI39_RS10935	0.21	-1.4
2,933,190	-		ABI39_RS10935	0.21	-0.4
2,933,304	-		ABI39_RS10935	0.28	+0.7
2,933,366	+		ABI39_RS10935	0.32	-0.4
2,933,371	-		ABI39_RS10935	0.32	-0.2
2,933,410	-		ABI39_RS10935	0.35	+1.9
2,933,516	+		ABI39_RS10935	0.41	-0.7
2,933,516	+		ABI39_RS10935	0.41	+1.0
2,933,517	-		ABI39_RS10935	0.41	-0.6
2,933,518	+		ABI39_RS10935	0.41	-2.3
2,933,530	+		ABI39_RS10935	0.42	-0.9
2,933,534	+		ABI39_RS10935	0.42	+0.1
2,933,857	+		ABI39_RS10935	0.63	-0.7
2,933,973	-		ABI39_RS10935	0.70	+0.2
2,933,996	+		ABI39_RS10935	0.72	+0.1
2,933,996	+		ABI39_RS10935	0.72	-0.5
2,934,029	-		ABI39_RS10935	0.74	-0.7
2,934,040	+		ABI39_RS10935	0.74	-1.6
2,934,041	-		ABI39_RS10935	0.74	-0.4
2,934,041	-		ABI39_RS10935	0.74	-0.7
2,934,449	+				-0.6
2,934,527	+				-0.3
2,934,528	-				-0.4
2,934,654	-				+1.0
2,934,658	-				-1.2
2,934,803	+		ABI39_RS10940	0.10	-0.6
2,934,832	+		ABI39_RS10940	0.12	+0.5
2,934,833	-		ABI39_RS10940	0.12	-0.5
2,934,883	+		ABI39_RS10940	0.13	-0.5
2,934,972	-		ABI39_RS10940	0.17	+0.2
2,934,992	-		ABI39_RS10940	0.18	+1.7
2,934,994	-		ABI39_RS10940	0.18	+0.4
2,934,996	-		ABI39_RS10940	0.18	-1.7
2,934,999	+		ABI39_RS10940	0.18	-0.7
2,935,000	-		ABI39_RS10940	0.18	+0.1
2,935,000	-		ABI39_RS10940	0.18	+0.3
2,935,001	+		ABI39_RS10940	0.18	+0.7
2,935,028	+		ABI39_RS10940	0.19	+1.0
2,935,041	-		ABI39_RS10940	0.19	+0.2
2,935,179	+		ABI39_RS10940	0.25	+0.4
2,935,180	-		ABI39_RS10940	0.25	+0.1
2,935,194	-		ABI39_RS10940	0.25	-1.0
2,935,216	-		ABI39_RS10940	0.26	-0.5
2,935,275	-		ABI39_RS10940	0.28	-0.3