Experiment: b-Glucan from Beet (1,2-b-Glucan) (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS02685 and ABI39_RS02690 are separated by 91 nucleotides ABI39_RS02690 and ABI39_RS02695 are separated by 422 nucleotides
ABI39_RS02685: ABI39_RS02685 - DUF2264 domain-containing protein, at 779,512 to 781,827
_RS02685
ABI39_RS02690: ABI39_RS02690 - BNR-4 repeat-containing protein, at 781,919 to 783,193
_RS02690
ABI39_RS02695: ABI39_RS02695 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase, at 783,616 to 784,914
_RS02695
Position (kb) 781
782
783
784 Strain fitness (log2 ratio) -2
-1
0
1 at 780.941 kb on + strand, within ABI39_RS02685 at 781.061 kb on + strand, within ABI39_RS02685 at 781.249 kb on - strand, within ABI39_RS02685 at 781.312 kb on - strand, within ABI39_RS02685 at 781.313 kb on + strand, within ABI39_RS02685 at 781.314 kb on - strand, within ABI39_RS02685 at 781.342 kb on - strand, within ABI39_RS02685 at 781.343 kb on + strand, within ABI39_RS02685 at 781.343 kb on + strand, within ABI39_RS02685 at 781.344 kb on - strand, within ABI39_RS02685 at 781.426 kb on - strand, within ABI39_RS02685 at 781.448 kb on + strand, within ABI39_RS02685 at 781.448 kb on + strand, within ABI39_RS02685 at 781.460 kb on + strand, within ABI39_RS02685 at 781.461 kb on - strand, within ABI39_RS02685 at 781.495 kb on + strand, within ABI39_RS02685 at 781.499 kb on + strand, within ABI39_RS02685 at 781.593 kb on - strand, within ABI39_RS02685 at 781.626 kb on - strand at 781.704 kb on - strand at 781.720 kb on + strand at 781.721 kb on - strand at 781.868 kb on + strand at 781.869 kb on - strand at 781.936 kb on - strand at 782.106 kb on - strand, within ABI39_RS02690 at 782.121 kb on + strand, within ABI39_RS02690 at 782.122 kb on - strand, within ABI39_RS02690 at 782.353 kb on - strand, within ABI39_RS02690 at 782.374 kb on + strand, within ABI39_RS02690 at 782.480 kb on - strand, within ABI39_RS02690 at 782.481 kb on + strand, within ABI39_RS02690 at 782.691 kb on - strand, within ABI39_RS02690 at 782.726 kb on + strand, within ABI39_RS02690 at 782.926 kb on + strand, within ABI39_RS02690 at 782.939 kb on + strand, within ABI39_RS02690 at 783.088 kb on + strand at 783.093 kb on - strand at 783.251 kb on + strand at 783.251 kb on + strand at 783.252 kb on - strand at 783.301 kb on - strand at 783.328 kb on + strand at 783.373 kb on - strand at 783.426 kb on + strand at 783.428 kb on + strand at 783.523 kb on + strand at 783.527 kb on + strand at 783.528 kb on - strand at 783.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Beet (1,2-b-Glucan) (C) remove 780,941 + ABI39_RS02685 0.62 -0.2 781,061 + ABI39_RS02685 0.67 +0.4 781,249 - ABI39_RS02685 0.75 +0.7 781,312 - ABI39_RS02685 0.78 -0.2 781,313 + ABI39_RS02685 0.78 +0.9 781,314 - ABI39_RS02685 0.78 +1.1 781,342 - ABI39_RS02685 0.79 -0.1 781,343 + ABI39_RS02685 0.79 -0.2 781,343 + ABI39_RS02685 0.79 +0.4 781,344 - ABI39_RS02685 0.79 +1.0 781,426 - ABI39_RS02685 0.83 +0.5 781,448 + ABI39_RS02685 0.84 -0.1 781,448 + ABI39_RS02685 0.84 +0.3 781,460 + ABI39_RS02685 0.84 -0.8 781,461 - ABI39_RS02685 0.84 -0.4 781,495 + ABI39_RS02685 0.86 -0.4 781,499 + ABI39_RS02685 0.86 -0.0 781,593 - ABI39_RS02685 0.90 +0.3 781,626 - +0.3 781,704 - +0.2 781,720 + +0.4 781,721 - +0.4 781,868 + +0.1 781,869 - -0.3 781,936 - -0.2 782,106 - ABI39_RS02690 0.15 -0.7 782,121 + ABI39_RS02690 0.16 -0.5 782,122 - ABI39_RS02690 0.16 -1.5 782,353 - ABI39_RS02690 0.34 +0.5 782,374 + ABI39_RS02690 0.36 -0.4 782,480 - ABI39_RS02690 0.44 -1.1 782,481 + ABI39_RS02690 0.44 -2.1 782,691 - ABI39_RS02690 0.61 +0.0 782,726 + ABI39_RS02690 0.63 +0.6 782,926 + ABI39_RS02690 0.79 -0.2 782,939 + ABI39_RS02690 0.80 +0.5 783,088 + +0.7 783,093 - +0.5 783,251 + -0.4 783,251 + -1.4 783,252 - +0.0 783,301 - -0.1 783,328 + +0.4 783,373 - +0.0 783,426 + -0.7 783,428 + -0.2 783,523 + -0.3 783,527 + +0.3 783,528 - -0.4 783,528 - +0.6
Or see this region's nucleotide sequence