Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rhaT and OKGIIK_16855 are separated by 60 nucleotides OKGIIK_16855 and OKGIIK_16860 are separated by 217 nucleotides OKGIIK_16860 and groL are separated by 110 nucleotides
OKGIIK_16850: rhaT - EamA family transporter, at 3,695,308 to 3,696,204
rhaT
OKGIIK_16855: OKGIIK_16855 - Cation tolerance protein, at 3,696,265 to 3,696,618
_16855
OKGIIK_16860: OKGIIK_16860 - Co-chaperonin GroES, at 3,696,836 to 3,697,129
_16860
OKGIIK_16865: groL - chaperonin GroEL, at 3,697,240 to 3,698,889
groL
Position (kb)
3696
3697 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3695.270 kb on + strand at 3695.271 kb on - strand at 3695.271 kb on - strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.310 kb on - strand at 3695.310 kb on - strand at 3695.474 kb on + strand, within rhaT at 3695.474 kb on + strand, within rhaT at 3695.475 kb on - strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3696.314 kb on + strand, within OKGIIK_16855 at 3696.314 kb on + strand, within OKGIIK_16855 at 3696.315 kb on - strand, within OKGIIK_16855 at 3696.315 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.473 kb on + strand, within OKGIIK_16855 at 3696.474 kb on - strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.629 kb on + strand at 3696.629 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.740 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 3,695,270 + +0.7 3,695,271 - +0.1 3,695,271 - +1.4 3,695,309 + +1.2 3,695,309 + -0.2 3,695,309 + -0.3 3,695,309 + +0.4 3,695,309 + -0.7 3,695,309 + -1.8 3,695,309 + +0.9 3,695,309 + -0.9 3,695,309 + -1.6 3,695,309 + -2.5 3,695,309 + -0.1 3,695,309 + +1.4 3,695,310 - +0.3 3,695,310 - -1.9 3,695,474 + rhaT OKGIIK_16850 0.19 -1.0 3,695,474 + rhaT OKGIIK_16850 0.19 -0.7 3,695,475 - rhaT OKGIIK_16850 0.19 -0.3 3,695,534 + rhaT OKGIIK_16850 0.25 +0.3 3,695,534 + rhaT OKGIIK_16850 0.25 -0.9 3,695,534 + rhaT OKGIIK_16850 0.25 +1.1 3,695,534 + rhaT OKGIIK_16850 0.25 +1.2 3,695,534 + rhaT OKGIIK_16850 0.25 +0.2 3,695,534 + rhaT OKGIIK_16850 0.25 -0.3 3,695,534 + rhaT OKGIIK_16850 0.25 -0.1 3,695,535 - rhaT OKGIIK_16850 0.25 +0.4 3,695,535 - rhaT OKGIIK_16850 0.25 +1.9 3,695,535 - rhaT OKGIIK_16850 0.25 -0.2 3,695,535 - rhaT OKGIIK_16850 0.25 +0.3 3,695,535 - rhaT OKGIIK_16850 0.25 -0.5 3,695,535 - rhaT OKGIIK_16850 0.25 -0.3 3,695,535 - rhaT OKGIIK_16850 0.25 +0.6 3,695,535 - rhaT OKGIIK_16850 0.25 +1.1 3,695,535 - rhaT OKGIIK_16850 0.25 -0.6 3,695,535 - rhaT OKGIIK_16850 0.25 +1.1 3,695,535 - rhaT OKGIIK_16850 0.25 +0.9 3,695,535 - rhaT OKGIIK_16850 0.25 +0.3 3,695,708 + rhaT OKGIIK_16850 0.45 -1.7 3,695,708 + rhaT OKGIIK_16850 0.45 +0.4 3,695,708 + rhaT OKGIIK_16850 0.45 +0.3 3,695,708 + rhaT OKGIIK_16850 0.45 -0.1 3,695,708 + rhaT OKGIIK_16850 0.45 -1.2 3,695,708 + rhaT OKGIIK_16850 0.45 -1.5 3,695,708 + rhaT OKGIIK_16850 0.45 +0.1 3,695,708 + rhaT OKGIIK_16850 0.45 -1.8 3,695,709 - rhaT OKGIIK_16850 0.45 -0.5 3,695,709 - rhaT OKGIIK_16850 0.45 -1.5 3,695,709 - rhaT OKGIIK_16850 0.45 -0.9 3,695,709 - rhaT OKGIIK_16850 0.45 +1.2 3,695,709 - rhaT OKGIIK_16850 0.45 -0.6 3,695,709 - rhaT OKGIIK_16850 0.45 -2.1 3,695,726 + rhaT OKGIIK_16850 0.47 +0.3 3,695,726 + rhaT OKGIIK_16850 0.47 -0.7 3,695,726 + rhaT OKGIIK_16850 0.47 -0.9 3,695,726 + rhaT OKGIIK_16850 0.47 +1.7 3,695,727 - rhaT OKGIIK_16850 0.47 -0.1 3,695,727 - rhaT OKGIIK_16850 0.47 -0.8 3,695,727 - rhaT OKGIIK_16850 0.47 -1.1 3,695,727 - rhaT OKGIIK_16850 0.47 -0.3 3,695,727 - rhaT OKGIIK_16850 0.47 +0.3 3,696,314 + OKGIIK_16855 0.14 -1.2 3,696,314 + OKGIIK_16855 0.14 +1.3 3,696,315 - OKGIIK_16855 0.14 -0.8 3,696,315 - OKGIIK_16855 0.14 +1.3 3,696,366 - OKGIIK_16855 0.29 -0.6 3,696,366 - OKGIIK_16855 0.29 -0.2 3,696,366 - OKGIIK_16855 0.29 +1.5 3,696,366 - OKGIIK_16855 0.29 -1.9 3,696,473 + OKGIIK_16855 0.59 -1.6 3,696,474 - OKGIIK_16855 0.59 -0.7 3,696,578 + OKGIIK_16855 0.88 +0.2 3,696,578 + OKGIIK_16855 0.88 +0.8 3,696,578 + OKGIIK_16855 0.88 -0.9 3,696,578 + OKGIIK_16855 0.88 -0.0 3,696,578 + OKGIIK_16855 0.88 -0.7 3,696,578 + OKGIIK_16855 0.88 -0.3 3,696,578 + OKGIIK_16855 0.88 -0.7 3,696,579 - OKGIIK_16855 0.89 -0.1 3,696,579 - OKGIIK_16855 0.89 -0.0 3,696,579 - OKGIIK_16855 0.89 +0.7 3,696,579 - OKGIIK_16855 0.89 -0.6 3,696,579 - OKGIIK_16855 0.89 -1.2 3,696,579 - OKGIIK_16855 0.89 +0.8 3,696,579 - OKGIIK_16855 0.89 +1.5 3,696,629 + +0.3 3,696,629 + +0.1 3,696,689 + +0.0 3,696,689 + +0.3 3,696,689 + -0.1 3,696,689 + -1.3 3,696,689 + +0.7 3,696,689 + +1.3 3,696,689 + +0.4 3,696,689 + -1.3 3,696,689 + +0.5 3,696,689 + -0.2 3,696,689 + +1.0 3,696,689 + -0.3 3,696,689 + +0.8 3,696,689 + +1.7 3,696,690 - -1.3 3,696,690 - +1.6 3,696,690 - -1.7 3,696,690 - +1.1 3,696,690 - -0.7 3,696,690 - -0.9 3,696,690 - +1.1 3,696,690 - -0.1 3,696,690 - +0.8 3,696,690 - -1.1 3,696,690 - +1.0 3,696,690 - +0.3 3,696,690 - -0.8 3,696,690 - -1.0 3,696,740 + +0.2
Or see this region's nucleotide sequence