Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13420

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
2,896,531	+				-0.2
2,896,531	+				-0.5
2,896,531	+				-1.4
2,896,531	+				+0.4
2,896,602	+				-0.4
2,896,647	+				-1.1
2,896,647	+				+0.4
2,896,647	+				-2.1
2,896,648	-				-1.2
2,896,657	+				-1.5
2,896,657	+				-1.4
2,896,657	+				+0.2
2,896,658	-				-0.4
2,896,658	-				-2.0
2,896,658	-				+0.7
2,896,658	-				+1.0
2,896,658	-				+0.2
2,896,706	-				+0.0
2,896,706	-				-0.4
2,896,707	-				+0.3
2,896,848	-		OKGIIK_13415	0.22	-0.4
2,896,848	-		OKGIIK_13415	0.22	-1.8
2,896,939	+		OKGIIK_13415	0.39	-0.4
2,896,939	+		OKGIIK_13415	0.39	-0.1
2,896,940	-		OKGIIK_13415	0.39	+1.9
2,896,994	-		OKGIIK_13415	0.49	+0.0
2,897,035	+		OKGIIK_13415	0.57	+1.2
2,897,035	+		OKGIIK_13415	0.57	+1.6
2,897,035	+		OKGIIK_13415	0.57	-0.4
2,897,280	-				+1.6
2,897,280	-				-0.4
2,897,280	-				+1.1
2,897,300	+				+0.3
2,897,300	+				+0.5
2,897,300	+				+0.4
2,897,300	+				-3.1
2,897,300	+				-1.2
2,897,301	-				-0.7
2,897,301	-				-0.4
2,897,303	-				+0.9
2,897,303	-				+1.0
2,897,312	-				-0.7
2,897,583	+		OKGIIK_13420	0.60	+0.2
2,897,584	-		OKGIIK_13420	0.61	-1.9
2,897,765	+				-0.8
2,897,789	+				-1.0
2,897,803	+				-1.5
2,897,803	+				+0.8
2,897,803	+				-0.1
2,897,803	+				-1.6
2,897,804	-				-0.4
2,897,804	-				+0.9
2,897,814	-				-1.0
2,897,976	+				+0.0
2,897,976	+				+0.3
2,897,976	+				+1.6
2,897,977	-				+0.6
2,897,977	-				-1.4
2,897,981	-				+0.8
2,897,981	-				-0.6
2,897,981	-				-2.4
2,898,008	+				-0.1
2,898,009	-				-0.5
2,898,009	-				-2.0
2,898,056	+				-1.5
2,898,218	+				-2.0
2,898,219	-				+1.4
2,898,219	-				+0.6
2,898,312	+				-1.7
2,898,405	+		OKGIIK_13425	0.11	-1.4
2,898,406	-		OKGIIK_13425	0.11	+0.3
2,898,406	-		OKGIIK_13425	0.11	+0.9
2,898,486	+		OKGIIK_13425	0.13	+0.1
2,898,538	+		OKGIIK_13425	0.15	-1.1
2,898,615	+		OKGIIK_13425	0.17	+0.3
2,898,615	+		OKGIIK_13425	0.17	-1.4
2,898,615	+		OKGIIK_13425	0.17	+0.6
2,898,615	+		OKGIIK_13425	0.17	+0.6
2,898,615	+		OKGIIK_13425	0.17	-1.7
2,898,687	+		OKGIIK_13425	0.20	+0.4
2,898,696	+		OKGIIK_13425	0.20	+0.2
2,898,696	+		OKGIIK_13425	0.20	+0.1
2,898,697	-		OKGIIK_13425	0.20	-1.2
2,898,697	-		OKGIIK_13425	0.20	-1.8
2,898,768	+		OKGIIK_13425	0.22	-1.1
2,898,769	-		OKGIIK_13425	0.22	-0.7