Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_11495 and OKGIIK_11500 are separated by 130 nucleotides OKGIIK_11500 and purL are separated by 29 nucleotides
OKGIIK_11495: OKGIIK_11495 - Glycosyl transferase family 2, at 2,466,892 to 2,467,734
_11495
OKGIIK_11500: OKGIIK_11500 - hypothetical protein, at 2,467,865 to 2,468,611
_11500
OKGIIK_11505: purL - phosphoribosylformylglycinamidine synthase, at 2,468,641 to 2,472,507
purL
Position (kb)
2467
2468
2469 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.277 kb on - strand, within OKGIIK_11495 at 2467.277 kb on - strand, within OKGIIK_11495 at 2467.277 kb on - strand, within OKGIIK_11495 at 2467.559 kb on + strand, within OKGIIK_11495 at 2467.559 kb on + strand, within OKGIIK_11495 at 2467.559 kb on + strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2468.139 kb on + strand, within OKGIIK_11500 at 2468.139 kb on + strand, within OKGIIK_11500 at 2468.140 kb on - strand, within OKGIIK_11500 at 2468.140 kb on - strand, within OKGIIK_11500 at 2468.140 kb on - strand, within OKGIIK_11500
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 2,467,181 + OKGIIK_11495 0.34 -1.3 2,467,181 + OKGIIK_11495 0.34 -0.3 2,467,181 + OKGIIK_11495 0.34 -0.9 2,467,181 + OKGIIK_11495 0.34 -1.6 2,467,181 + OKGIIK_11495 0.34 -0.5 2,467,181 + OKGIIK_11495 0.34 -1.8 2,467,181 + OKGIIK_11495 0.34 -1.3 2,467,181 + OKGIIK_11495 0.34 -0.5 2,467,181 + OKGIIK_11495 0.34 -1.3 2,467,181 + OKGIIK_11495 0.34 -0.3 2,467,182 - OKGIIK_11495 0.34 -0.9 2,467,182 - OKGIIK_11495 0.34 -1.1 2,467,182 - OKGIIK_11495 0.34 -1.1 2,467,182 - OKGIIK_11495 0.34 -2.0 2,467,182 - OKGIIK_11495 0.34 -0.8 2,467,277 - OKGIIK_11495 0.46 -1.0 2,467,277 - OKGIIK_11495 0.46 -1.8 2,467,277 - OKGIIK_11495 0.46 -0.7 2,467,559 + OKGIIK_11495 0.79 +0.3 2,467,559 + OKGIIK_11495 0.79 -0.2 2,467,559 + OKGIIK_11495 0.79 -0.7 2,467,560 - OKGIIK_11495 0.79 -0.7 2,467,560 - OKGIIK_11495 0.79 -0.7 2,467,560 - OKGIIK_11495 0.79 -0.7 2,467,560 - OKGIIK_11495 0.79 -0.9 2,467,560 - OKGIIK_11495 0.79 -0.3 2,467,565 + OKGIIK_11495 0.80 -2.7 2,467,565 + OKGIIK_11495 0.80 -3.1 2,467,565 + OKGIIK_11495 0.80 -0.3 2,467,565 + OKGIIK_11495 0.80 +0.1 2,467,565 + OKGIIK_11495 0.80 +1.3 2,467,565 + OKGIIK_11495 0.80 -1.1 2,467,566 - OKGIIK_11495 0.80 -1.0 2,467,566 - OKGIIK_11495 0.80 -0.3 2,467,566 - OKGIIK_11495 0.80 -2.6 2,467,566 - OKGIIK_11495 0.80 -0.7 2,467,566 - OKGIIK_11495 0.80 +0.1 2,467,566 - OKGIIK_11495 0.80 -1.8 2,467,566 - OKGIIK_11495 0.80 -1.2 2,467,566 - OKGIIK_11495 0.80 -0.3 2,467,566 - OKGIIK_11495 0.80 -1.2 2,467,566 - OKGIIK_11495 0.80 -2.4 2,467,566 - OKGIIK_11495 0.80 -0.7 2,467,566 - OKGIIK_11495 0.80 -2.0 2,467,791 + -1.0 2,467,791 + -0.7 2,467,791 + -0.3 2,467,791 + +1.7 2,467,791 + -0.5 2,467,791 + +0.8 2,467,791 + +0.5 2,467,791 + -2.0 2,467,791 + +0.3 2,467,791 + +1.0 2,467,792 - -0.7 2,467,792 - +1.4 2,467,792 - -1.9 2,467,792 - -0.5 2,467,792 - +0.5 2,467,982 + OKGIIK_11500 0.16 +0.5 2,467,982 + OKGIIK_11500 0.16 +1.2 2,467,982 + OKGIIK_11500 0.16 +0.4 2,467,982 + OKGIIK_11500 0.16 -0.2 2,467,983 - OKGIIK_11500 0.16 -0.5 2,467,983 - OKGIIK_11500 0.16 -0.9 2,467,983 - OKGIIK_11500 0.16 -0.6 2,467,983 - OKGIIK_11500 0.16 +0.3 2,467,983 - OKGIIK_11500 0.16 +0.5 2,467,983 - OKGIIK_11500 0.16 -0.8 2,467,983 - OKGIIK_11500 0.16 -0.1 2,468,139 + OKGIIK_11500 0.37 +0.9 2,468,139 + OKGIIK_11500 0.37 +0.1 2,468,140 - OKGIIK_11500 0.37 +0.3 2,468,140 - OKGIIK_11500 0.37 -1.5 2,468,140 - OKGIIK_11500 0.37 +0.1
Or see this region's nucleotide sequence