Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_09760 and OKGIIK_09765 are separated by 92 nucleotides OKGIIK_09765 and OKGIIK_09770 are separated by 117 nucleotides OKGIIK_09770 and OKGIIK_09775 are separated by 21 nucleotides
OKGIIK_09760: OKGIIK_09760 - 2-nitropropane dioxygenase, at 2,105,282 to 2,106,364
_09760
OKGIIK_09765: OKGIIK_09765 - Pentapeptide MXKDX repeat-containing protein, at 2,106,457 to 2,106,729
_09765
OKGIIK_09770: OKGIIK_09770 - DUF1345 domain-containing protein, at 2,106,847 to 2,107,539
_09770
OKGIIK_09775: OKGIIK_09775 - Acetyltransferase, at 2,107,561 to 2,107,836
_09775
Position (kb)
2106
2107 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2105.917 kb on - strand, within OKGIIK_09760 at 2106.397 kb on - strand at 2106.397 kb on - strand at 2106.397 kb on - strand at 2106.397 kb on - strand at 2106.397 kb on - strand at 2106.397 kb on - strand at 2106.843 kb on + strand at 2106.844 kb on - strand at 2106.844 kb on - strand at 2106.844 kb on - strand at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.947 kb on + strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2106.948 kb on - strand, within OKGIIK_09770 at 2107.007 kb on + strand, within OKGIIK_09770 at 2107.007 kb on + strand, within OKGIIK_09770 at 2107.008 kb on - strand, within OKGIIK_09770 at 2107.008 kb on - strand, within OKGIIK_09770 at 2107.008 kb on - strand, within OKGIIK_09770 at 2107.022 kb on + strand, within OKGIIK_09770 at 2107.023 kb on - strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.082 kb on + strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.083 kb on - strand, within OKGIIK_09770 at 2107.086 kb on - strand, within OKGIIK_09770 at 2107.086 kb on - strand, within OKGIIK_09770 at 2107.086 kb on - strand, within OKGIIK_09770 at 2107.097 kb on + strand, within OKGIIK_09770 at 2107.097 kb on + strand, within OKGIIK_09770 at 2107.097 kb on + strand, within OKGIIK_09770 at 2107.098 kb on - strand, within OKGIIK_09770 at 2107.098 kb on - strand, within OKGIIK_09770 at 2107.343 kb on + strand, within OKGIIK_09770 at 2107.343 kb on + strand, within OKGIIK_09770 at 2107.343 kb on + strand, within OKGIIK_09770 at 2107.343 kb on + strand, within OKGIIK_09770 at 2107.343 kb on + strand, within OKGIIK_09770 at 2107.344 kb on - strand, within OKGIIK_09770 at 2107.344 kb on - strand, within OKGIIK_09770 at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.543 kb on + strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.544 kb on - strand at 2107.580 kb on + strand at 2107.581 kb on - strand at 2107.581 kb on - strand at 2107.581 kb on - strand at 2107.581 kb on - strand at 2107.581 kb on - strand at 2107.581 kb on - strand at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.613 kb on + strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.614 kb on - strand, within OKGIIK_09775 at 2107.722 kb on + strand, within OKGIIK_09775 at 2107.722 kb on + strand, within OKGIIK_09775
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 2,105,917 - OKGIIK_09760 0.59 -0.7 2,105,917 - OKGIIK_09760 0.59 -2.1 2,105,917 - OKGIIK_09760 0.59 -1.5 2,105,917 - OKGIIK_09760 0.59 -0.5 2,105,917 - OKGIIK_09760 0.59 -0.9 2,105,917 - OKGIIK_09760 0.59 -0.7 2,105,917 - OKGIIK_09760 0.59 -0.7 2,105,917 - OKGIIK_09760 0.59 -0.3 2,105,917 - OKGIIK_09760 0.59 +1.3 2,105,917 - OKGIIK_09760 0.59 -0.7 2,105,917 - OKGIIK_09760 0.59 -1.3 2,105,917 - OKGIIK_09760 0.59 +0.7 2,106,397 - +0.3 2,106,397 - +0.9 2,106,397 - -0.5 2,106,397 - -0.2 2,106,397 - +0.8 2,106,397 - +0.9 2,106,843 + -0.1 2,106,844 - +0.7 2,106,844 - -0.1 2,106,844 - +0.1 2,106,947 + OKGIIK_09770 0.14 -1.2 2,106,947 + OKGIIK_09770 0.14 -0.7 2,106,947 + OKGIIK_09770 0.14 -0.5 2,106,947 + OKGIIK_09770 0.14 -1.1 2,106,947 + OKGIIK_09770 0.14 -0.9 2,106,947 + OKGIIK_09770 0.14 -2.2 2,106,947 + OKGIIK_09770 0.14 -0.7 2,106,947 + OKGIIK_09770 0.14 -0.5 2,106,947 + OKGIIK_09770 0.14 -0.7 2,106,947 + OKGIIK_09770 0.14 +1.2 2,106,947 + OKGIIK_09770 0.14 +1.4 2,106,947 + OKGIIK_09770 0.14 -1.4 2,106,947 + OKGIIK_09770 0.14 +0.7 2,106,947 + OKGIIK_09770 0.14 -1.1 2,106,947 + OKGIIK_09770 0.14 +1.9 2,106,947 + OKGIIK_09770 0.14 -1.3 2,106,948 - OKGIIK_09770 0.15 -2.6 2,106,948 - OKGIIK_09770 0.15 -0.6 2,106,948 - OKGIIK_09770 0.15 +0.7 2,106,948 - OKGIIK_09770 0.15 +0.7 2,106,948 - OKGIIK_09770 0.15 -0.1 2,106,948 - OKGIIK_09770 0.15 -0.9 2,106,948 - OKGIIK_09770 0.15 +0.1 2,106,948 - OKGIIK_09770 0.15 -0.9 2,106,948 - OKGIIK_09770 0.15 -0.9 2,106,948 - OKGIIK_09770 0.15 -0.3 2,106,948 - OKGIIK_09770 0.15 -1.5 2,106,948 - OKGIIK_09770 0.15 +0.7 2,106,948 - OKGIIK_09770 0.15 +0.1 2,106,948 - OKGIIK_09770 0.15 -1.1 2,106,948 - OKGIIK_09770 0.15 -0.1 2,106,948 - OKGIIK_09770 0.15 -0.6 2,106,948 - OKGIIK_09770 0.15 -0.2 2,106,948 - OKGIIK_09770 0.15 +0.3 2,106,948 - OKGIIK_09770 0.15 -1.7 2,106,948 - OKGIIK_09770 0.15 +1.0 2,106,948 - OKGIIK_09770 0.15 -0.2 2,107,007 + OKGIIK_09770 0.23 +0.6 2,107,007 + OKGIIK_09770 0.23 -0.3 2,107,008 - OKGIIK_09770 0.23 +0.7 2,107,008 - OKGIIK_09770 0.23 +0.4 2,107,008 - OKGIIK_09770 0.23 +0.3 2,107,022 + OKGIIK_09770 0.25 +0.1 2,107,023 - OKGIIK_09770 0.25 +1.0 2,107,082 + OKGIIK_09770 0.34 -0.7 2,107,082 + OKGIIK_09770 0.34 +0.2 2,107,082 + OKGIIK_09770 0.34 +0.3 2,107,082 + OKGIIK_09770 0.34 -0.5 2,107,082 + OKGIIK_09770 0.34 +0.5 2,107,082 + OKGIIK_09770 0.34 -0.2 2,107,082 + OKGIIK_09770 0.34 -0.6 2,107,082 + OKGIIK_09770 0.34 -0.2 2,107,083 - OKGIIK_09770 0.34 -1.8 2,107,083 - OKGIIK_09770 0.34 +2.0 2,107,083 - OKGIIK_09770 0.34 -0.3 2,107,083 - OKGIIK_09770 0.34 +0.8 2,107,083 - OKGIIK_09770 0.34 -0.7 2,107,083 - OKGIIK_09770 0.34 +0.4 2,107,083 - OKGIIK_09770 0.34 +0.2 2,107,086 - OKGIIK_09770 0.34 +0.7 2,107,086 - OKGIIK_09770 0.34 -0.7 2,107,086 - OKGIIK_09770 0.34 -0.3 2,107,097 + OKGIIK_09770 0.36 -1.7 2,107,097 + OKGIIK_09770 0.36 +1.2 2,107,097 + OKGIIK_09770 0.36 -2.9 2,107,098 - OKGIIK_09770 0.36 -0.7 2,107,098 - OKGIIK_09770 0.36 +0.3 2,107,343 + OKGIIK_09770 0.72 -0.7 2,107,343 + OKGIIK_09770 0.72 +0.7 2,107,343 + OKGIIK_09770 0.72 -2.3 2,107,343 + OKGIIK_09770 0.72 +0.4 2,107,343 + OKGIIK_09770 0.72 -2.3 2,107,344 - OKGIIK_09770 0.72 -0.5 2,107,344 - OKGIIK_09770 0.72 +0.1 2,107,543 + +0.0 2,107,543 + -2.2 2,107,543 + -0.8 2,107,543 + +1.2 2,107,543 + -2.1 2,107,543 + +0.7 2,107,543 + +0.7 2,107,543 + +1.6 2,107,543 + -0.1 2,107,543 + +1.9 2,107,543 + +0.0 2,107,543 + -1.1 2,107,543 + -1.3 2,107,543 + -2.0 2,107,543 + -0.3 2,107,543 + +0.7 2,107,543 + +0.1 2,107,544 - +0.1 2,107,544 - -0.3 2,107,544 - -0.6 2,107,544 - +0.3 2,107,544 - +0.4 2,107,544 - -0.7 2,107,544 - +0.2 2,107,544 - +1.7 2,107,544 - -0.7 2,107,544 - +0.1 2,107,544 - -0.6 2,107,544 - +0.1 2,107,544 - +0.7 2,107,544 - -1.3 2,107,544 - +0.1 2,107,544 - +0.3 2,107,544 - +0.0 2,107,544 - +0.2 2,107,580 + -0.8 2,107,581 - +0.1 2,107,581 - +0.9 2,107,581 - +1.1 2,107,581 - -0.7 2,107,581 - +0.4 2,107,581 - -2.2 2,107,613 + OKGIIK_09775 0.19 -1.0 2,107,613 + OKGIIK_09775 0.19 +0.9 2,107,613 + OKGIIK_09775 0.19 +2.0 2,107,613 + OKGIIK_09775 0.19 -0.5 2,107,613 + OKGIIK_09775 0.19 +0.1 2,107,613 + OKGIIK_09775 0.19 -0.9 2,107,613 + OKGIIK_09775 0.19 -0.9 2,107,613 + OKGIIK_09775 0.19 -1.5 2,107,613 + OKGIIK_09775 0.19 -0.8 2,107,613 + OKGIIK_09775 0.19 +0.1 2,107,613 + OKGIIK_09775 0.19 -0.9 2,107,613 + OKGIIK_09775 0.19 -2.2 2,107,614 - OKGIIK_09775 0.19 -0.1 2,107,614 - OKGIIK_09775 0.19 -1.7 2,107,614 - OKGIIK_09775 0.19 -1.9 2,107,614 - OKGIIK_09775 0.19 -0.7 2,107,614 - OKGIIK_09775 0.19 +1.9 2,107,614 - OKGIIK_09775 0.19 -1.1 2,107,614 - OKGIIK_09775 0.19 +1.3 2,107,614 - OKGIIK_09775 0.19 -0.3 2,107,614 - OKGIIK_09775 0.19 -0.1 2,107,614 - OKGIIK_09775 0.19 +0.9 2,107,614 - OKGIIK_09775 0.19 -0.9 2,107,614 - OKGIIK_09775 0.19 -0.9 2,107,614 - OKGIIK_09775 0.19 -0.2 2,107,722 + OKGIIK_09775 0.58 +1.7 2,107,722 + OKGIIK_09775 0.58 -2.0
Or see this region's nucleotide sequence