Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07760

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_07745 and OKGIIK_07750 overlap by 4 nucleotidesOKGIIK_07750 and yIH1 overlap by 4 nucleotidesyIH1 and mdlB are separated by 127 nucleotidesmdlB and OKGIIK_07765 are separated by 127 nucleotides OKGIIK_07745: OKGIIK_07745 - hypothetical protein, at 1,718,108 to 1,718,245 _07745 OKGIIK_07750: OKGIIK_07750 - hypothetical protein, at 1,718,242 to 1,718,379 _07750 OKGIIK_07755: yIH1 - Thymidylate synthase, at 1,718,376 to 1,718,969 yIH1 OKGIIK_07760: mdlB - ABC transporter, at 1,719,097 to 1,720,869 mdlB OKGIIK_07765: OKGIIK_07765 - zinc-binding dehydrogenase, at 1,720,997 to 1,722,049 _07765 Position (kb) 1719 1720 1721Strain fitness (log2 ratio) -2 -1 0 1 2at 1718.398 kb on + strandat 1718.398 kb on + strandat 1718.398 kb on + strandat 1718.399 kb on - strandat 1718.399 kb on - strandat 1718.539 kb on - strand, within yIH1at 1718.557 kb on - strand, within yIH1at 1718.665 kb on - strand, within yIH1at 1718.706 kb on + strand, within yIH1at 1718.967 kb on + strandat 1718.967 kb on + strandat 1718.967 kb on + strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.968 kb on - strandat 1718.990 kb on + strandat 1718.990 kb on + strandat 1718.990 kb on + strandat 1718.990 kb on + strandat 1718.990 kb on + strandat 1718.991 kb on - strandat 1718.991 kb on - strandat 1718.991 kb on - strandat 1718.991 kb on - strandat 1718.991 kb on - strandat 1719.261 kb on + strandat 1719.261 kb on + strandat 1719.261 kb on + strandat 1719.261 kb on + strandat 1719.262 kb on - strandat 1719.338 kb on + strand, within mdlBat 1719.368 kb on - strand, within mdlBat 1719.368 kb on - strand, within mdlBat 1719.424 kb on + strand, within mdlBat 1719.424 kb on + strand, within mdlBat 1719.424 kb on + strand, within mdlBat 1719.425 kb on - strand, within mdlBat 1719.425 kb on - strand, within mdlBat 1719.425 kb on - strand, within mdlBat 1719.769 kb on + strand, within mdlBat 1719.769 kb on + strand, within mdlBat 1719.770 kb on - strand, within mdlBat 1719.770 kb on - strand, within mdlBat 1719.979 kb on + strand, within mdlBat 1719.979 kb on + strand, within mdlBat 1719.979 kb on + strand, within mdlBat 1719.980 kb on - strand, within mdlBat 1719.980 kb on - strand, within mdlBat 1719.980 kb on - strand, within mdlBat 1719.980 kb on - strand, within mdlBat 1719.980 kb on - strand, within mdlBat 1720.022 kb on + strand, within mdlBat 1720.022 kb on + strand, within mdlBat 1720.023 kb on - strand, within mdlBat 1720.023 kb on - strand, within mdlBat 1720.023 kb on - strand, within mdlBat 1720.171 kb on + strand, within mdlBat 1720.171 kb on + strand, within mdlBat 1720.300 kb on + strand, within mdlBat 1720.300 kb on + strand, within mdlBat 1720.301 kb on - strand, within mdlBat 1720.301 kb on - strand, within mdlBat 1720.301 kb on - strand, within mdlBat 1720.301 kb on - strand, within mdlBat 1720.351 kb on - strand, within mdlBat 1720.432 kb on - strand, within mdlBat 1720.469 kb on + strand, within mdlBat 1720.470 kb on - strand, within mdlBat 1720.470 kb on - strand, within mdlBat 1720.470 kb on - strand, within mdlBat 1720.835 kb on - strandat 1720.873 kb on - strandat 1720.873 kb on - strandat 1720.900 kb on - strandat 1720.900 kb on - strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.931 kb on + strandat 1720.932 kb on - strandat 1720.932 kb on - strandat 1720.932 kb on - strandat 1720.932 kb on - strandat 1720.965 kb on + strandat 1721.034 kb on + strandat 1721.034 kb on + strandat 1721.034 kb on + strandat 1721.035 kb on - strandat 1721.064 kb on + strandat 1721.064 kb on + strandat 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.733 kb on + strand, within OKGIIK_07765at 1721.733 kb on + strand, within OKGIIK_07765at 1721.733 kb on + strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.810 kb on + strand, within OKGIIK_07765

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
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1,718,398 + -1.1
1,718,398 + -0.6
1,718,398 + +0.7
1,718,399 - -0.2
1,718,399 - +0.9
1,718,539 - yIH1 OKGIIK_07755 0.27 +0.4
1,718,557 - yIH1 OKGIIK_07755 0.30 +0.1
1,718,665 - yIH1 OKGIIK_07755 0.49 -0.3
1,718,706 + yIH1 OKGIIK_07755 0.56 -0.5
1,718,967 + +0.5
1,718,967 + +0.2
1,718,967 + +0.3
1,718,968 - +0.5
1,718,968 - +0.7
1,718,968 - -1.5
1,718,968 - -1.8
1,718,968 - +0.1
1,718,968 - -1.3
1,718,968 - -0.2
1,718,968 - -0.0
1,718,968 - -0.7
1,718,990 + -0.3
1,718,990 + -0.7
1,718,990 + +0.5
1,718,990 + -1.8
1,718,990 + +1.1
1,718,991 - -0.1
1,718,991 - -1.5
1,718,991 - -1.1
1,718,991 - +0.0
1,718,991 - -1.3
1,719,261 + +0.2
1,719,261 + -0.5
1,719,261 + -1.5
1,719,261 + +0.9
1,719,262 - -0.3
1,719,338 + mdlB OKGIIK_07760 0.14 +0.0
1,719,368 - mdlB OKGIIK_07760 0.15 +2.0
1,719,368 - mdlB OKGIIK_07760 0.15 -1.0
1,719,424 + mdlB OKGIIK_07760 0.18 -0.3
1,719,424 + mdlB OKGIIK_07760 0.18 -0.4
1,719,424 + mdlB OKGIIK_07760 0.18 +1.0
1,719,425 - mdlB OKGIIK_07760 0.18 -0.9
1,719,425 - mdlB OKGIIK_07760 0.18 +0.1
1,719,425 - mdlB OKGIIK_07760 0.18 +0.7
1,719,769 + mdlB OKGIIK_07760 0.38 -0.0
1,719,769 + mdlB OKGIIK_07760 0.38 +1.1
1,719,770 - mdlB OKGIIK_07760 0.38 +0.2
1,719,770 - mdlB OKGIIK_07760 0.38 +1.1
1,719,979 + mdlB OKGIIK_07760 0.50 -0.7
1,719,979 + mdlB OKGIIK_07760 0.50 -0.2
1,719,979 + mdlB OKGIIK_07760 0.50 -0.9
1,719,980 - mdlB OKGIIK_07760 0.50 +1.6
1,719,980 - mdlB OKGIIK_07760 0.50 -0.8
1,719,980 - mdlB OKGIIK_07760 0.50 -0.9
1,719,980 - mdlB OKGIIK_07760 0.50 -0.8
1,719,980 - mdlB OKGIIK_07760 0.50 +1.8
1,720,022 + mdlB OKGIIK_07760 0.52 +0.3
1,720,022 + mdlB OKGIIK_07760 0.52 -0.2
1,720,023 - mdlB OKGIIK_07760 0.52 -0.8
1,720,023 - mdlB OKGIIK_07760 0.52 +0.1
1,720,023 - mdlB OKGIIK_07760 0.52 -0.3
1,720,171 + mdlB OKGIIK_07760 0.61 -2.2
1,720,171 + mdlB OKGIIK_07760 0.61 -0.2
1,720,300 + mdlB OKGIIK_07760 0.68 -0.3
1,720,300 + mdlB OKGIIK_07760 0.68 -0.2
1,720,301 - mdlB OKGIIK_07760 0.68 -0.9
1,720,301 - mdlB OKGIIK_07760 0.68 -0.3
1,720,301 - mdlB OKGIIK_07760 0.68 +0.4
1,720,301 - mdlB OKGIIK_07760 0.68 -1.8
1,720,351 - mdlB OKGIIK_07760 0.71 -1.3
1,720,432 - mdlB OKGIIK_07760 0.75 -1.1
1,720,469 + mdlB OKGIIK_07760 0.77 -0.3
1,720,470 - mdlB OKGIIK_07760 0.77 -1.7
1,720,470 - mdlB OKGIIK_07760 0.77 -2.4
1,720,470 - mdlB OKGIIK_07760 0.77 -0.7
1,720,835 - -0.6
1,720,873 - -0.8
1,720,873 - -0.8
1,720,900 - -0.1
1,720,900 - +0.2
1,720,931 + -0.3
1,720,931 + -0.2
1,720,931 + -0.3
1,720,931 + -1.1
1,720,931 + +0.8
1,720,931 + -0.0
1,720,931 + +0.5
1,720,931 + +0.3
1,720,931 + -0.2
1,720,931 + -1.4
1,720,931 + +0.7
1,720,931 + +1.2
1,720,932 - -0.3
1,720,932 - -1.8
1,720,932 - -1.9
1,720,932 - +0.9
1,720,965 + +0.5
1,721,034 + -1.9
1,721,034 + +1.4
1,721,034 + -0.9
1,721,035 - -0.2
1,721,064 + -0.7
1,721,064 + -0.3
1,721,286 + OKGIIK_07765 0.27 +0.2
1,721,286 + OKGIIK_07765 0.27 +1.0
1,721,286 + OKGIIK_07765 0.27 +0.7
1,721,286 + OKGIIK_07765 0.27 -1.3
1,721,286 + OKGIIK_07765 0.27 -0.1
1,721,286 + OKGIIK_07765 0.27 +1.0
1,721,286 + OKGIIK_07765 0.27 -0.1
1,721,286 + OKGIIK_07765 0.27 -2.3
1,721,286 + OKGIIK_07765 0.27 -0.7
1,721,286 + OKGIIK_07765 0.27 -0.7
1,721,286 + OKGIIK_07765 0.27 +0.0
1,721,286 + OKGIIK_07765 0.27 -0.8
1,721,286 + OKGIIK_07765 0.27 -0.1
1,721,286 + OKGIIK_07765 0.27 -1.9
1,721,286 + OKGIIK_07765 0.27 -2.5
1,721,286 + OKGIIK_07765 0.27 -0.3
1,721,287 - OKGIIK_07765 0.28 +0.1
1,721,287 - OKGIIK_07765 0.28 -2.0
1,721,287 - OKGIIK_07765 0.28 +0.7
1,721,287 - OKGIIK_07765 0.28 -0.3
1,721,287 - OKGIIK_07765 0.28 +0.3
1,721,287 - OKGIIK_07765 0.28 -0.6
1,721,287 - OKGIIK_07765 0.28 -0.2
1,721,287 - OKGIIK_07765 0.28 -0.5
1,721,287 - OKGIIK_07765 0.28 -2.4
1,721,287 - OKGIIK_07765 0.28 +0.4
1,721,287 - OKGIIK_07765 0.28 -0.7
1,721,448 + OKGIIK_07765 0.43 -0.5
1,721,448 + OKGIIK_07765 0.43 -0.5
1,721,448 + OKGIIK_07765 0.43 +0.9
1,721,448 + OKGIIK_07765 0.43 -0.2
1,721,448 + OKGIIK_07765 0.43 +0.4
1,721,448 + OKGIIK_07765 0.43 +0.3
1,721,448 + OKGIIK_07765 0.43 +0.1
1,721,448 + OKGIIK_07765 0.43 +1.3
1,721,449 - OKGIIK_07765 0.43 -0.1
1,721,449 - OKGIIK_07765 0.43 +0.2
1,721,449 - OKGIIK_07765 0.43 +0.9
1,721,449 - OKGIIK_07765 0.43 +0.3
1,721,449 - OKGIIK_07765 0.43 -1.9
1,721,449 - OKGIIK_07765 0.43 +0.4
1,721,449 - OKGIIK_07765 0.43 -0.8
1,721,449 - OKGIIK_07765 0.43 +1.7
1,721,556 + OKGIIK_07765 0.53 -0.2
1,721,556 + OKGIIK_07765 0.53 +1.0
1,721,556 + OKGIIK_07765 0.53 +0.1
1,721,556 + OKGIIK_07765 0.53 -0.3
1,721,556 + OKGIIK_07765 0.53 +2.4
1,721,556 + OKGIIK_07765 0.53 -0.9
1,721,557 - OKGIIK_07765 0.53 +0.3
1,721,557 - OKGIIK_07765 0.53 -0.4
1,721,557 - OKGIIK_07765 0.53 -1.2
1,721,557 - OKGIIK_07765 0.53 +1.7
1,721,557 - OKGIIK_07765 0.53 -0.9
1,721,557 - OKGIIK_07765 0.53 +1.2
1,721,557 - OKGIIK_07765 0.53 -0.2
1,721,557 - OKGIIK_07765 0.53 -1.5
1,721,557 - OKGIIK_07765 0.53 +0.5
1,721,706 + OKGIIK_07765 0.67 -0.8
1,721,706 + OKGIIK_07765 0.67 +0.9
1,721,706 + OKGIIK_07765 0.67 +1.2
1,721,706 + OKGIIK_07765 0.67 -0.6
1,721,706 + OKGIIK_07765 0.67 +0.2
1,721,706 + OKGIIK_07765 0.67 +0.3
1,721,707 - OKGIIK_07765 0.67 -1.3
1,721,707 - OKGIIK_07765 0.67 -1.0
1,721,707 - OKGIIK_07765 0.67 -2.2
1,721,707 - OKGIIK_07765 0.67 +0.1
1,721,707 - OKGIIK_07765 0.67 +1.9
1,721,707 - OKGIIK_07765 0.67 -0.6
1,721,707 - OKGIIK_07765 0.67 +0.8
1,721,707 - OKGIIK_07765 0.67 -0.2
1,721,707 - OKGIIK_07765 0.67 +0.3
1,721,707 - OKGIIK_07765 0.67 -1.3
1,721,707 - OKGIIK_07765 0.67 +0.5
1,721,733 + OKGIIK_07765 0.70 +0.3
1,721,733 + OKGIIK_07765 0.70 -0.5
1,721,733 + OKGIIK_07765 0.70 +0.1
1,721,734 - OKGIIK_07765 0.70 +1.9
1,721,734 - OKGIIK_07765 0.70 -0.9
1,721,734 - OKGIIK_07765 0.70 +0.3
1,721,734 - OKGIIK_07765 0.70 +0.2
1,721,734 - OKGIIK_07765 0.70 +0.9
1,721,810 + OKGIIK_07765 0.77 +0.3

Or see this region's nucleotide sequence