Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_04095 and OKGIIK_04100 are separated by 151 nucleotides OKGIIK_04100 and rAYT are separated by 169 nucleotides rAYT and OKGIIK_04110 overlap by 30 nucleotides
OKGIIK_04095: OKGIIK_04095 - hypothetical protein, at 897,235 to 899,517
_04095
OKGIIK_04100: OKGIIK_04100 - IS4 family transposase, at 899,669 to 900,877
_04100
OKGIIK_04105: rAYT - REP element-mobilizing transposase RayT, at 901,047 to 901,526
rAYT
OKGIIK_04110: OKGIIK_04110 - IS3 family transposase, at 901,497 to 902,315
_04110
Position (kb) 899
900
901 Strain fitness (log2 ratio) -2
-1
0
1
2 at 898.706 kb on + strand, within OKGIIK_04095 at 898.706 kb on + strand, within OKGIIK_04095 at 898.706 kb on + strand, within OKGIIK_04095 at 898.730 kb on + strand, within OKGIIK_04095 at 898.731 kb on - strand, within OKGIIK_04095 at 898.751 kb on + strand, within OKGIIK_04095 at 898.754 kb on + strand, within OKGIIK_04095 at 898.754 kb on + strand, within OKGIIK_04095 at 898.755 kb on - strand, within OKGIIK_04095 at 898.755 kb on - strand, within OKGIIK_04095 at 898.784 kb on + strand, within OKGIIK_04095 at 898.785 kb on - strand, within OKGIIK_04095 at 898.911 kb on + strand, within OKGIIK_04095 at 898.986 kb on + strand, within OKGIIK_04095 at 899.058 kb on + strand, within OKGIIK_04095 at 899.062 kb on - strand, within OKGIIK_04095 at 899.062 kb on - strand, within OKGIIK_04095 at 899.114 kb on + strand, within OKGIIK_04095 at 899.165 kb on + strand, within OKGIIK_04095 at 899.188 kb on - strand, within OKGIIK_04095 at 899.219 kb on + strand, within OKGIIK_04095 at 899.281 kb on - strand, within OKGIIK_04095 at 899.281 kb on - strand, within OKGIIK_04095 at 899.281 kb on - strand, within OKGIIK_04095 at 899.284 kb on + strand, within OKGIIK_04095 at 899.284 kb on + strand, within OKGIIK_04095 at 899.285 kb on - strand, within OKGIIK_04095 at 899.301 kb on + strand at 899.302 kb on - strand at 899.418 kb on + strand at 899.418 kb on + strand at 899.419 kb on - strand at 899.422 kb on + strand at 899.422 kb on + strand at 899.422 kb on + strand at 899.422 kb on + strand at 899.422 kb on + strand at 899.422 kb on + strand at 899.424 kb on + strand at 899.424 kb on + strand at 899.425 kb on - strand at 899.425 kb on - strand at 899.515 kb on + strand at 899.515 kb on + strand at 900.910 kb on + strand at 900.911 kb on - strand at 900.911 kb on - strand at 900.911 kb on - strand at 900.911 kb on - strand at 900.929 kb on + strand at 900.929 kb on + strand at 900.929 kb on + strand at 900.930 kb on - strand at 900.930 kb on - strand at 900.930 kb on - strand at 900.930 kb on - strand at 900.930 kb on - strand at 901.153 kb on - strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.206 kb on + strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.207 kb on - strand, within rAYT at 901.220 kb on + strand, within rAYT at 901.220 kb on + strand, within rAYT at 901.221 kb on - strand, within rAYT at 901.249 kb on + strand, within rAYT at 901.250 kb on - strand, within rAYT at 901.280 kb on + strand, within rAYT at 901.280 kb on + strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.281 kb on - strand, within rAYT at 901.296 kb on + strand, within rAYT at 901.296 kb on + strand, within rAYT at 901.296 kb on + strand, within rAYT at 901.296 kb on + strand, within rAYT at 901.296 kb on + strand, within rAYT at 901.297 kb on - strand, within rAYT at 901.297 kb on - strand, within rAYT at 901.297 kb on - strand, within rAYT at 901.335 kb on - strand, within rAYT at 901.353 kb on + strand, within rAYT at 901.353 kb on + strand, within rAYT at 901.353 kb on + strand, within rAYT at 901.353 kb on + strand, within rAYT at 901.353 kb on + strand, within rAYT at 901.353 kb on + strand, within rAYT at 901.354 kb on - strand, within rAYT at 901.354 kb on - strand, within rAYT at 901.354 kb on - strand, within rAYT at 901.354 kb on - strand, within rAYT at 901.383 kb on + strand, within rAYT at 901.384 kb on - strand, within rAYT at 901.384 kb on - strand, within rAYT at 901.384 kb on - strand, within rAYT at 901.384 kb on - strand, within rAYT at 901.384 kb on - strand, within rAYT at 901.404 kb on + strand, within rAYT at 901.404 kb on + strand, within rAYT at 901.404 kb on + strand, within rAYT at 901.404 kb on + strand, within rAYT at 901.404 kb on + strand, within rAYT at 901.405 kb on - strand, within rAYT at 901.405 kb on - strand, within rAYT at 901.455 kb on + strand, within rAYT at 901.456 kb on - strand, within rAYT at 901.456 kb on - strand, within rAYT at 901.470 kb on + strand, within rAYT at 901.470 kb on + strand, within rAYT at 901.471 kb on - strand, within rAYT at 901.471 kb on - strand, within rAYT at 901.499 kb on - strand at 901.499 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand at 901.525 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 898,706 + OKGIIK_04095 0.64 -1.8 898,706 + OKGIIK_04095 0.64 +0.8 898,706 + OKGIIK_04095 0.64 +0.4 898,730 + OKGIIK_04095 0.65 -0.9 898,731 - OKGIIK_04095 0.66 -0.4 898,751 + OKGIIK_04095 0.66 +1.3 898,754 + OKGIIK_04095 0.67 -1.7 898,754 + OKGIIK_04095 0.67 +0.6 898,755 - OKGIIK_04095 0.67 +0.6 898,755 - OKGIIK_04095 0.67 -0.2 898,784 + OKGIIK_04095 0.68 -0.1 898,785 - OKGIIK_04095 0.68 +0.2 898,911 + OKGIIK_04095 0.73 -1.9 898,986 + OKGIIK_04095 0.77 -1.4 899,058 + OKGIIK_04095 0.80 -1.4 899,062 - OKGIIK_04095 0.80 -0.8 899,062 - OKGIIK_04095 0.80 -1.0 899,114 + OKGIIK_04095 0.82 +0.9 899,165 + OKGIIK_04095 0.85 +0.5 899,188 - OKGIIK_04095 0.86 -1.5 899,219 + OKGIIK_04095 0.87 -1.7 899,281 - OKGIIK_04095 0.90 -0.2 899,281 - OKGIIK_04095 0.90 -0.2 899,281 - OKGIIK_04095 0.90 -0.8 899,284 + OKGIIK_04095 0.90 -0.1 899,284 + OKGIIK_04095 0.90 -1.1 899,285 - OKGIIK_04095 0.90 -0.2 899,301 + -0.1 899,302 - +0.5 899,418 + -0.2 899,418 + -0.5 899,419 - -0.1 899,422 + +2.2 899,422 + +0.4 899,422 + -0.7 899,422 + -1.4 899,422 + +0.6 899,422 + -1.0 899,424 + -1.9 899,424 + -0.9 899,425 - -0.7 899,425 - -1.4 899,515 + +0.6 899,515 + -0.1 900,910 + -2.1 900,911 - +0.9 900,911 - -0.2 900,911 - +1.2 900,911 - -0.1 900,929 + -1.8 900,929 + -1.5 900,929 + -1.2 900,930 - +0.1 900,930 - +0.5 900,930 - -0.0 900,930 - -0.3 900,930 - -1.3 901,153 - rAYT OKGIIK_04105 0.22 -0.6 901,206 + rAYT OKGIIK_04105 0.33 +1.6 901,206 + rAYT OKGIIK_04105 0.33 -0.6 901,206 + rAYT OKGIIK_04105 0.33 -1.7 901,206 + rAYT OKGIIK_04105 0.33 +0.6 901,206 + rAYT OKGIIK_04105 0.33 +0.2 901,206 + rAYT OKGIIK_04105 0.33 -0.4 901,206 + rAYT OKGIIK_04105 0.33 -0.7 901,206 + rAYT OKGIIK_04105 0.33 -0.5 901,206 + rAYT OKGIIK_04105 0.33 -1.2 901,207 - rAYT OKGIIK_04105 0.33 +0.6 901,207 - rAYT OKGIIK_04105 0.33 +1.0 901,207 - rAYT OKGIIK_04105 0.33 -0.5 901,207 - rAYT OKGIIK_04105 0.33 -0.4 901,207 - rAYT OKGIIK_04105 0.33 +0.6 901,207 - rAYT OKGIIK_04105 0.33 -0.9 901,207 - rAYT OKGIIK_04105 0.33 -0.1 901,220 + rAYT OKGIIK_04105 0.36 +0.6 901,220 + rAYT OKGIIK_04105 0.36 -0.3 901,221 - rAYT OKGIIK_04105 0.36 -0.8 901,249 + rAYT OKGIIK_04105 0.42 +0.0 901,250 - rAYT OKGIIK_04105 0.42 +0.8 901,280 + rAYT OKGIIK_04105 0.49 -2.2 901,280 + rAYT OKGIIK_04105 0.49 +0.6 901,281 - rAYT OKGIIK_04105 0.49 +1.3 901,281 - rAYT OKGIIK_04105 0.49 -0.1 901,281 - rAYT OKGIIK_04105 0.49 +0.3 901,281 - rAYT OKGIIK_04105 0.49 -0.7 901,281 - rAYT OKGIIK_04105 0.49 -0.4 901,281 - rAYT OKGIIK_04105 0.49 +0.3 901,281 - rAYT OKGIIK_04105 0.49 -0.4 901,281 - rAYT OKGIIK_04105 0.49 -0.1 901,296 + rAYT OKGIIK_04105 0.52 +0.2 901,296 + rAYT OKGIIK_04105 0.52 -1.1 901,296 + rAYT OKGIIK_04105 0.52 -0.7 901,296 + rAYT OKGIIK_04105 0.52 -1.2 901,296 + rAYT OKGIIK_04105 0.52 -0.8 901,297 - rAYT OKGIIK_04105 0.52 -1.5 901,297 - rAYT OKGIIK_04105 0.52 +0.6 901,297 - rAYT OKGIIK_04105 0.52 -0.4 901,335 - rAYT OKGIIK_04105 0.60 +0.5 901,353 + rAYT OKGIIK_04105 0.64 -0.6 901,353 + rAYT OKGIIK_04105 0.64 -1.5 901,353 + rAYT OKGIIK_04105 0.64 +0.6 901,353 + rAYT OKGIIK_04105 0.64 -0.2 901,353 + rAYT OKGIIK_04105 0.64 -1.7 901,353 + rAYT OKGIIK_04105 0.64 -2.3 901,354 - rAYT OKGIIK_04105 0.64 -1.4 901,354 - rAYT OKGIIK_04105 0.64 -0.6 901,354 - rAYT OKGIIK_04105 0.64 -1.5 901,354 - rAYT OKGIIK_04105 0.64 +0.3 901,383 + rAYT OKGIIK_04105 0.70 +1.4 901,384 - rAYT OKGIIK_04105 0.70 +0.5 901,384 - rAYT OKGIIK_04105 0.70 -0.5 901,384 - rAYT OKGIIK_04105 0.70 +0.1 901,384 - rAYT OKGIIK_04105 0.70 -1.0 901,384 - rAYT OKGIIK_04105 0.70 +0.6 901,404 + rAYT OKGIIK_04105 0.74 -1.2 901,404 + rAYT OKGIIK_04105 0.74 -0.0 901,404 + rAYT OKGIIK_04105 0.74 -0.4 901,404 + rAYT OKGIIK_04105 0.74 +2.3 901,404 + rAYT OKGIIK_04105 0.74 -0.5 901,405 - rAYT OKGIIK_04105 0.75 -1.2 901,405 - rAYT OKGIIK_04105 0.75 -0.9 901,455 + rAYT OKGIIK_04105 0.85 -2.1 901,456 - rAYT OKGIIK_04105 0.85 +0.1 901,456 - rAYT OKGIIK_04105 0.85 +1.2 901,470 + rAYT OKGIIK_04105 0.88 -1.7 901,470 + rAYT OKGIIK_04105 0.88 -1.4 901,471 - rAYT OKGIIK_04105 0.88 -1.3 901,471 - rAYT OKGIIK_04105 0.88 +0.6 901,499 - +0.1 901,499 - -0.8 901,525 - +1.2 901,525 - +0.8 901,525 - +0.2 901,525 - -0.2 901,525 - -1.4 901,525 - +0.3 901,525 - -0.4 901,525 - +0.4
Or see this region's nucleotide sequence