Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgJ and OKGIIK_02695 overlap by 4 nucleotides OKGIIK_02695 and flgK overlap by 8 nucleotides flgK and flgL are separated by 3 nucleotides
OKGIIK_02690: flgJ - flagellar assembly peptidoglycan hydrolase FlgJ, at 623,747 to 624,814
flgJ
OKGIIK_02695: OKGIIK_02695 - hypothetical protein, at 624,811 to 625,461
_02695
OKGIIK_02700: flgK - flagellar hook-associated protein FlgK, at 625,454 to 627,328
flgK
OKGIIK_02705: flgL - flagellar hook-associated protein FlgL, at 627,332 to 628,534
flgL
Position (kb) 625
626
627
628 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 624.539 kb on + strand, within flgJ at 624.539 kb on + strand, within flgJ at 624.539 kb on + strand, within flgJ at 624.540 kb on - strand, within flgJ at 624.584 kb on + strand, within flgJ at 624.584 kb on + strand, within flgJ at 624.585 kb on - strand, within flgJ at 624.614 kb on + strand, within flgJ at 624.615 kb on - strand, within flgJ at 624.644 kb on + strand, within flgJ at 624.710 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.729 kb on - strand at 624.729 kb on - strand at 624.729 kb on - strand at 624.729 kb on - strand at 625.467 kb on + strand at 625.467 kb on + strand at 625.467 kb on + strand at 625.479 kb on + strand at 625.480 kb on - strand at 625.543 kb on + strand at 625.543 kb on + strand at 625.544 kb on - strand at 625.554 kb on - strand at 625.574 kb on + strand at 625.575 kb on - strand at 625.575 kb on - strand at 625.575 kb on - strand at 625.608 kb on - strand at 625.608 kb on - strand at 625.610 kb on + strand at 625.610 kb on + strand at 625.610 kb on + strand at 625.610 kb on + strand at 625.610 kb on + strand at 625.610 kb on + strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.611 kb on - strand at 625.652 kb on + strand, within flgK at 625.653 kb on - strand, within flgK at 625.653 kb on - strand, within flgK at 625.653 kb on - strand, within flgK at 625.653 kb on - strand, within flgK at 625.845 kb on + strand, within flgK at 625.845 kb on + strand, within flgK at 625.845 kb on + strand, within flgK at 625.845 kb on + strand, within flgK at 625.846 kb on - strand, within flgK at 625.846 kb on - strand, within flgK at 625.846 kb on - strand, within flgK at 625.846 kb on - strand, within flgK at 625.846 kb on - strand, within flgK at 625.846 kb on - strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.923 kb on + strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 625.924 kb on - strand, within flgK at 626.101 kb on - strand, within flgK at 626.198 kb on + strand, within flgK at 626.198 kb on + strand, within flgK at 626.198 kb on + strand, within flgK at 626.198 kb on + strand, within flgK at 626.199 kb on - strand, within flgK at 626.199 kb on - strand, within flgK at 626.199 kb on - strand, within flgK at 626.199 kb on - strand, within flgK at 626.519 kb on + strand, within flgK at 626.519 kb on + strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.520 kb on - strand, within flgK at 626.531 kb on + strand, within flgK at 626.531 kb on + strand, within flgK at 626.531 kb on + strand, within flgK at 626.531 kb on + strand, within flgK at 626.531 kb on + strand, within flgK at 626.532 kb on - strand, within flgK at 626.532 kb on - strand, within flgK at 626.532 kb on - strand, within flgK at 626.779 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.873 kb on + strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.874 kb on - strand, within flgK at 626.985 kb on + strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 626.986 kb on - strand, within flgK at 627.167 kb on + strand at 627.167 kb on + strand at 627.167 kb on + strand at 627.167 kb on + strand at 627.168 kb on - strand at 627.168 kb on - strand at 627.168 kb on - strand at 627.168 kb on - strand at 627.168 kb on - strand at 627.168 kb on - strand at 627.254 kb on + strand at 627.254 kb on + strand at 627.254 kb on + strand at 627.254 kb on + strand at 627.254 kb on + strand at 627.255 kb on - strand at 627.255 kb on - strand at 627.326 kb on + strand at 627.326 kb on + strand at 627.412 kb on + strand at 627.412 kb on + strand at 627.412 kb on + strand at 627.412 kb on + strand at 627.412 kb on + strand at 627.412 kb on + strand at 627.412 kb on + strand at 627.413 kb on - strand at 627.413 kb on - strand at 627.413 kb on - strand at 627.413 kb on - strand at 627.515 kb on + strand, within flgL at 627.515 kb on + strand, within flgL at 627.516 kb on - strand, within flgL at 627.516 kb on - strand, within flgL at 627.731 kb on + strand, within flgL at 627.731 kb on + strand, within flgL at 627.731 kb on + strand, within flgL at 627.731 kb on + strand, within flgL at 627.731 kb on + strand, within flgL at 627.732 kb on - strand, within flgL at 627.732 kb on - strand, within flgL at 627.732 kb on - strand, within flgL at 627.732 kb on - strand, within flgL at 627.732 kb on - strand, within flgL at 627.732 kb on - strand, within flgL at 627.791 kb on + strand, within flgL at 627.791 kb on + strand, within flgL at 627.791 kb on + strand, within flgL at 627.791 kb on + strand, within flgL at 627.792 kb on - strand, within flgL at 627.792 kb on - strand, within flgL at 627.792 kb on - strand, within flgL at 627.792 kb on - strand, within flgL at 627.792 kb on - strand, within flgL at 628.005 kb on - strand, within flgL at 628.005 kb on - strand, within flgL at 628.005 kb on - strand, within flgL at 628.005 kb on - strand, within flgL at 628.034 kb on + strand, within flgL at 628.034 kb on + strand, within flgL at 628.035 kb on - strand, within flgL at 628.035 kb on - strand, within flgL at 628.035 kb on - strand, within flgL at 628.035 kb on - strand, within flgL at 628.035 kb on - strand, within flgL at 628.035 kb on - strand, within flgL at 628.079 kb on + strand, within flgL at 628.079 kb on + strand, within flgL at 628.079 kb on + strand, within flgL at 628.080 kb on - strand, within flgL at 628.080 kb on - strand, within flgL at 628.125 kb on + strand, within flgL at 628.125 kb on + strand, within flgL at 628.126 kb on - strand, within flgL at 628.126 kb on - strand, within flgL at 628.126 kb on - strand, within flgL
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 624,539 + flgJ OKGIIK_02690 0.74 -1.2 624,539 + flgJ OKGIIK_02690 0.74 +0.0 624,539 + flgJ OKGIIK_02690 0.74 -0.3 624,540 - flgJ OKGIIK_02690 0.74 +0.6 624,584 + flgJ OKGIIK_02690 0.78 -0.3 624,584 + flgJ OKGIIK_02690 0.78 -0.4 624,585 - flgJ OKGIIK_02690 0.78 -1.7 624,614 + flgJ OKGIIK_02690 0.81 -1.1 624,615 - flgJ OKGIIK_02690 0.81 +0.7 624,644 + flgJ OKGIIK_02690 0.84 -1.0 624,710 + -1.7 624,728 + +1.2 624,728 + +0.6 624,728 + -1.4 624,728 + +0.2 624,728 + +0.8 624,728 + -0.1 624,728 + -0.7 624,729 - -0.2 624,729 - -2.1 624,729 - -2.5 624,729 - -0.2 625,467 + -1.6 625,467 + -0.2 625,467 + -1.4 625,479 + +2.3 625,480 - -0.7 625,543 + -0.7 625,543 + +0.6 625,544 - -2.3 625,554 - +0.9 625,574 + +0.3 625,575 - +0.6 625,575 - +0.2 625,575 - -1.7 625,608 - -0.3 625,608 - +0.0 625,610 + -1.0 625,610 + -0.4 625,610 + -0.3 625,610 + -0.6 625,610 + -2.0 625,610 + -0.9 625,611 - -0.7 625,611 - -0.7 625,611 - -1.9 625,611 - -0.4 625,611 - +1.2 625,611 - -1.5 625,611 - +0.5 625,611 - +0.3 625,611 - +0.6 625,611 - +0.1 625,611 - +0.2 625,611 - +0.1 625,611 - +0.2 625,611 - +0.4 625,652 + flgK OKGIIK_02700 0.11 -0.6 625,653 - flgK OKGIIK_02700 0.11 -0.2 625,653 - flgK OKGIIK_02700 0.11 -0.5 625,653 - flgK OKGIIK_02700 0.11 -1.2 625,653 - flgK OKGIIK_02700 0.11 -1.2 625,845 + flgK OKGIIK_02700 0.21 -2.3 625,845 + flgK OKGIIK_02700 0.21 +0.1 625,845 + flgK OKGIIK_02700 0.21 -0.3 625,845 + flgK OKGIIK_02700 0.21 +0.6 625,846 - flgK OKGIIK_02700 0.21 +0.6 625,846 - flgK OKGIIK_02700 0.21 -1.4 625,846 - flgK OKGIIK_02700 0.21 +0.2 625,846 - flgK OKGIIK_02700 0.21 +0.5 625,846 - flgK OKGIIK_02700 0.21 +0.6 625,846 - flgK OKGIIK_02700 0.21 +0.1 625,923 + flgK OKGIIK_02700 0.25 -1.0 625,923 + flgK OKGIIK_02700 0.25 -1.0 625,923 + flgK OKGIIK_02700 0.25 -1.9 625,923 + flgK OKGIIK_02700 0.25 +0.0 625,923 + flgK OKGIIK_02700 0.25 +0.6 625,923 + flgK OKGIIK_02700 0.25 -1.0 625,923 + flgK OKGIIK_02700 0.25 -1.1 625,923 + flgK OKGIIK_02700 0.25 -0.1 625,923 + flgK OKGIIK_02700 0.25 +0.9 625,924 - flgK OKGIIK_02700 0.25 -1.6 625,924 - flgK OKGIIK_02700 0.25 +0.0 625,924 - flgK OKGIIK_02700 0.25 +0.7 625,924 - flgK OKGIIK_02700 0.25 -0.5 625,924 - flgK OKGIIK_02700 0.25 +0.9 625,924 - flgK OKGIIK_02700 0.25 -1.1 625,924 - flgK OKGIIK_02700 0.25 -0.2 625,924 - flgK OKGIIK_02700 0.25 -0.2 625,924 - flgK OKGIIK_02700 0.25 -0.4 625,924 - flgK OKGIIK_02700 0.25 -0.4 625,924 - flgK OKGIIK_02700 0.25 -1.3 626,101 - flgK OKGIIK_02700 0.35 -1.2 626,198 + flgK OKGIIK_02700 0.40 -2.5 626,198 + flgK OKGIIK_02700 0.40 -1.3 626,198 + flgK OKGIIK_02700 0.40 +0.2 626,198 + flgK OKGIIK_02700 0.40 -1.7 626,199 - flgK OKGIIK_02700 0.40 +0.8 626,199 - flgK OKGIIK_02700 0.40 -1.1 626,199 - flgK OKGIIK_02700 0.40 -0.1 626,199 - flgK OKGIIK_02700 0.40 +1.4 626,519 + flgK OKGIIK_02700 0.57 +0.4 626,519 + flgK OKGIIK_02700 0.57 +2.7 626,520 - flgK OKGIIK_02700 0.57 -1.2 626,520 - flgK OKGIIK_02700 0.57 -0.3 626,520 - flgK OKGIIK_02700 0.57 +0.7 626,520 - flgK OKGIIK_02700 0.57 +1.2 626,520 - flgK OKGIIK_02700 0.57 -0.8 626,520 - flgK OKGIIK_02700 0.57 -0.6 626,520 - flgK OKGIIK_02700 0.57 -0.3 626,520 - flgK OKGIIK_02700 0.57 +0.5 626,531 + flgK OKGIIK_02700 0.57 +0.9 626,531 + flgK OKGIIK_02700 0.57 -0.6 626,531 + flgK OKGIIK_02700 0.57 +0.0 626,531 + flgK OKGIIK_02700 0.57 -0.5 626,531 + flgK OKGIIK_02700 0.57 -0.4 626,532 - flgK OKGIIK_02700 0.57 +0.6 626,532 - flgK OKGIIK_02700 0.57 -1.1 626,532 - flgK OKGIIK_02700 0.57 -1.2 626,779 + flgK OKGIIK_02700 0.71 -0.4 626,873 + flgK OKGIIK_02700 0.76 +0.6 626,873 + flgK OKGIIK_02700 0.76 -1.5 626,873 + flgK OKGIIK_02700 0.76 -2.5 626,873 + flgK OKGIIK_02700 0.76 +1.0 626,873 + flgK OKGIIK_02700 0.76 -1.0 626,873 + flgK OKGIIK_02700 0.76 +0.5 626,873 + flgK OKGIIK_02700 0.76 +0.6 626,873 + flgK OKGIIK_02700 0.76 -0.7 626,873 + flgK OKGIIK_02700 0.76 -0.6 626,873 + flgK OKGIIK_02700 0.76 +0.1 626,873 + flgK OKGIIK_02700 0.76 -0.7 626,873 + flgK OKGIIK_02700 0.76 +0.4 626,874 - flgK OKGIIK_02700 0.76 +1.0 626,874 - flgK OKGIIK_02700 0.76 +0.7 626,874 - flgK OKGIIK_02700 0.76 -0.2 626,874 - flgK OKGIIK_02700 0.76 -1.4 626,874 - flgK OKGIIK_02700 0.76 -1.5 626,874 - flgK OKGIIK_02700 0.76 +1.1 626,874 - flgK OKGIIK_02700 0.76 +0.4 626,874 - flgK OKGIIK_02700 0.76 +1.8 626,985 + flgK OKGIIK_02700 0.82 +0.1 626,986 - flgK OKGIIK_02700 0.82 +0.2 626,986 - flgK OKGIIK_02700 0.82 +0.4 626,986 - flgK OKGIIK_02700 0.82 +0.5 626,986 - flgK OKGIIK_02700 0.82 -1.7 626,986 - flgK OKGIIK_02700 0.82 -1.3 626,986 - flgK OKGIIK_02700 0.82 -1.2 626,986 - flgK OKGIIK_02700 0.82 -2.9 626,986 - flgK OKGIIK_02700 0.82 -1.6 626,986 - flgK OKGIIK_02700 0.82 +0.7 626,986 - flgK OKGIIK_02700 0.82 -0.4 626,986 - flgK OKGIIK_02700 0.82 -1.4 627,167 + -0.5 627,167 + -1.1 627,167 + -0.4 627,167 + +0.3 627,168 - +0.2 627,168 - +0.2 627,168 - +0.9 627,168 - -0.3 627,168 - +0.6 627,168 - -1.0 627,254 + -0.4 627,254 + -2.2 627,254 + +0.7 627,254 + +1.3 627,254 + -2.1 627,255 - +2.1 627,255 - -0.9 627,326 + -1.4 627,326 + -1.4 627,412 + +1.2 627,412 + -2.7 627,412 + -0.3 627,412 + -0.7 627,412 + +0.6 627,412 + -0.9 627,412 + -0.1 627,413 - -2.2 627,413 - +0.2 627,413 - +0.9 627,413 - +0.3 627,515 + flgL OKGIIK_02705 0.15 -1.0 627,515 + flgL OKGIIK_02705 0.15 -0.7 627,516 - flgL OKGIIK_02705 0.15 +0.2 627,516 - flgL OKGIIK_02705 0.15 +1.6 627,731 + flgL OKGIIK_02705 0.33 +0.0 627,731 + flgL OKGIIK_02705 0.33 +0.7 627,731 + flgL OKGIIK_02705 0.33 +0.0 627,731 + flgL OKGIIK_02705 0.33 -0.6 627,731 + flgL OKGIIK_02705 0.33 +1.9 627,732 - flgL OKGIIK_02705 0.33 +0.3 627,732 - flgL OKGIIK_02705 0.33 -0.4 627,732 - flgL OKGIIK_02705 0.33 -1.1 627,732 - flgL OKGIIK_02705 0.33 -0.0 627,732 - flgL OKGIIK_02705 0.33 +0.8 627,732 - flgL OKGIIK_02705 0.33 -0.1 627,791 + flgL OKGIIK_02705 0.38 -0.7 627,791 + flgL OKGIIK_02705 0.38 +0.6 627,791 + flgL OKGIIK_02705 0.38 -0.9 627,791 + flgL OKGIIK_02705 0.38 -0.5 627,792 - flgL OKGIIK_02705 0.38 +1.3 627,792 - flgL OKGIIK_02705 0.38 +0.0 627,792 - flgL OKGIIK_02705 0.38 -0.8 627,792 - flgL OKGIIK_02705 0.38 +0.4 627,792 - flgL OKGIIK_02705 0.38 -1.2 628,005 - flgL OKGIIK_02705 0.56 +1.0 628,005 - flgL OKGIIK_02705 0.56 -0.2 628,005 - flgL OKGIIK_02705 0.56 +0.7 628,005 - flgL OKGIIK_02705 0.56 -2.0 628,034 + flgL OKGIIK_02705 0.58 +1.2 628,034 + flgL OKGIIK_02705 0.58 +1.2 628,035 - flgL OKGIIK_02705 0.58 -1.0 628,035 - flgL OKGIIK_02705 0.58 -1.3 628,035 - flgL OKGIIK_02705 0.58 +0.5 628,035 - flgL OKGIIK_02705 0.58 -0.6 628,035 - flgL OKGIIK_02705 0.58 -1.9 628,035 - flgL OKGIIK_02705 0.58 -1.6 628,079 + flgL OKGIIK_02705 0.62 -2.0 628,079 + flgL OKGIIK_02705 0.62 -1.3 628,079 + flgL OKGIIK_02705 0.62 -1.2 628,080 - flgL OKGIIK_02705 0.62 +0.9 628,080 - flgL OKGIIK_02705 0.62 +0.2 628,125 + flgL OKGIIK_02705 0.66 +0.4 628,125 + flgL OKGIIK_02705 0.66 +0.6 628,126 - flgL OKGIIK_02705 0.66 -0.4 628,126 - flgL OKGIIK_02705 0.66 +0.1 628,126 - flgL OKGIIK_02705 0.66 -2.1
Or see this region's nucleotide sequence