Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mutY and OKGIIK_02570 overlap by 4 nucleotides OKGIIK_02570 and ftsY are separated by 23 nucleotides
OKGIIK_02565: mutY - A/G-specific adenine glycosylase, at 602,489 to 603,541
mutY
OKGIIK_02570: OKGIIK_02570 - Membrane assembly protein AsmA, at 603,538 to 604,596
_02570
OKGIIK_02575: ftsY - signal recognition particle-docking protein FtsY, at 604,620 to 605,759
ftsY
Position (kb) 603
604
605 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 602.578 kb on + strand at 602.629 kb on + strand, within mutY at 602.629 kb on + strand, within mutY at 602.630 kb on - strand, within mutY at 602.641 kb on - strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.953 kb on + strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.954 kb on - strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.957 kb on + strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.958 kb on - strand, within mutY at 602.991 kb on + strand, within mutY at 602.991 kb on + strand, within mutY at 602.991 kb on + strand, within mutY at 602.991 kb on + strand, within mutY at 602.991 kb on + strand, within mutY at 602.991 kb on + strand, within mutY at 602.991 kb on + strand, within mutY at 602.992 kb on - strand, within mutY at 602.992 kb on - strand, within mutY at 602.992 kb on - strand, within mutY at 602.992 kb on - strand, within mutY at 602.992 kb on - strand, within mutY at 602.992 kb on - strand, within mutY at 602.992 kb on - strand, within mutY at 603.016 kb on + strand, within mutY at 603.016 kb on + strand, within mutY at 603.016 kb on + strand, within mutY at 603.016 kb on + strand, within mutY at 603.016 kb on + strand, within mutY at 603.016 kb on + strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.017 kb on - strand, within mutY at 603.087 kb on + strand, within mutY at 603.087 kb on + strand, within mutY at 603.088 kb on - strand, within mutY at 603.088 kb on - strand, within mutY at 603.088 kb on - strand, within mutY at 603.282 kb on + strand, within mutY at 603.283 kb on - strand, within mutY at 603.283 kb on - strand, within mutY at 603.285 kb on + strand, within mutY at 603.285 kb on + strand, within mutY at 603.285 kb on + strand, within mutY at 603.285 kb on + strand, within mutY at 603.286 kb on - strand, within mutY at 603.286 kb on - strand, within mutY at 603.286 kb on - strand, within mutY at 603.378 kb on + strand, within mutY at 603.378 kb on + strand, within mutY at 603.378 kb on + strand, within mutY at 603.379 kb on - strand, within mutY at 603.379 kb on - strand, within mutY at 603.379 kb on - strand, within mutY at 603.379 kb on - strand, within mutY at 603.379 kb on - strand, within mutY at 603.379 kb on - strand, within mutY at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.842 kb on + strand, within OKGIIK_02570 at 603.843 kb on - strand, within OKGIIK_02570 at 603.843 kb on - strand, within OKGIIK_02570 at 603.843 kb on - strand, within OKGIIK_02570 at 603.843 kb on - strand, within OKGIIK_02570 at 603.843 kb on - strand, within OKGIIK_02570 at 604.308 kb on + strand, within OKGIIK_02570 at 604.308 kb on + strand, within OKGIIK_02570 at 604.308 kb on + strand, within OKGIIK_02570 at 604.308 kb on + strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.309 kb on - strand, within OKGIIK_02570 at 604.514 kb on + strand at 604.514 kb on + strand at 604.514 kb on + strand at 604.514 kb on + strand at 604.514 kb on + strand at 604.515 kb on - strand at 604.515 kb on - strand at 604.515 kb on - strand at 604.515 kb on - strand at 604.515 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 602,578 + -0.2 602,629 + mutY OKGIIK_02565 0.13 -0.6 602,629 + mutY OKGIIK_02565 0.13 -1.6 602,630 - mutY OKGIIK_02565 0.13 -1.2 602,641 - mutY OKGIIK_02565 0.14 -1.2 602,953 + mutY OKGIIK_02565 0.44 +0.9 602,953 + mutY OKGIIK_02565 0.44 -0.4 602,953 + mutY OKGIIK_02565 0.44 +0.1 602,953 + mutY OKGIIK_02565 0.44 -0.5 602,953 + mutY OKGIIK_02565 0.44 -1.9 602,953 + mutY OKGIIK_02565 0.44 +0.6 602,953 + mutY OKGIIK_02565 0.44 -0.1 602,953 + mutY OKGIIK_02565 0.44 -2.6 602,953 + mutY OKGIIK_02565 0.44 -1.2 602,953 + mutY OKGIIK_02565 0.44 -2.0 602,953 + mutY OKGIIK_02565 0.44 -0.4 602,953 + mutY OKGIIK_02565 0.44 -0.9 602,953 + mutY OKGIIK_02565 0.44 -0.1 602,953 + mutY OKGIIK_02565 0.44 -1.6 602,953 + mutY OKGIIK_02565 0.44 +0.6 602,954 - mutY OKGIIK_02565 0.44 +0.0 602,954 - mutY OKGIIK_02565 0.44 -1.4 602,954 - mutY OKGIIK_02565 0.44 -1.9 602,954 - mutY OKGIIK_02565 0.44 -1.0 602,954 - mutY OKGIIK_02565 0.44 -1.6 602,954 - mutY OKGIIK_02565 0.44 -1.2 602,954 - mutY OKGIIK_02565 0.44 -0.4 602,954 - mutY OKGIIK_02565 0.44 +0.3 602,954 - mutY OKGIIK_02565 0.44 -2.6 602,954 - mutY OKGIIK_02565 0.44 -0.4 602,954 - mutY OKGIIK_02565 0.44 +0.1 602,954 - mutY OKGIIK_02565 0.44 +0.1 602,954 - mutY OKGIIK_02565 0.44 -0.8 602,954 - mutY OKGIIK_02565 0.44 -0.7 602,954 - mutY OKGIIK_02565 0.44 +0.5 602,954 - mutY OKGIIK_02565 0.44 -0.7 602,954 - mutY OKGIIK_02565 0.44 -1.0 602,957 + mutY OKGIIK_02565 0.44 -1.6 602,957 + mutY OKGIIK_02565 0.44 -0.7 602,957 + mutY OKGIIK_02565 0.44 -1.9 602,957 + mutY OKGIIK_02565 0.44 -1.0 602,957 + mutY OKGIIK_02565 0.44 +0.3 602,957 + mutY OKGIIK_02565 0.44 -0.3 602,957 + mutY OKGIIK_02565 0.44 +0.2 602,957 + mutY OKGIIK_02565 0.44 -0.3 602,957 + mutY OKGIIK_02565 0.44 -1.0 602,957 + mutY OKGIIK_02565 0.44 -0.2 602,957 + mutY OKGIIK_02565 0.44 -0.4 602,957 + mutY OKGIIK_02565 0.44 -1.4 602,957 + mutY OKGIIK_02565 0.44 -2.6 602,957 + mutY OKGIIK_02565 0.44 -1.9 602,957 + mutY OKGIIK_02565 0.44 +0.8 602,957 + mutY OKGIIK_02565 0.44 +0.4 602,957 + mutY OKGIIK_02565 0.44 -0.7 602,957 + mutY OKGIIK_02565 0.44 -1.6 602,957 + mutY OKGIIK_02565 0.44 -0.7 602,957 + mutY OKGIIK_02565 0.44 -1.1 602,957 + mutY OKGIIK_02565 0.44 -0.5 602,957 + mutY OKGIIK_02565 0.44 -0.8 602,957 + mutY OKGIIK_02565 0.44 -1.0 602,957 + mutY OKGIIK_02565 0.44 +0.2 602,957 + mutY OKGIIK_02565 0.44 -0.4 602,957 + mutY OKGIIK_02565 0.44 -2.0 602,958 - mutY OKGIIK_02565 0.45 +0.2 602,958 - mutY OKGIIK_02565 0.45 -1.3 602,958 - mutY OKGIIK_02565 0.45 +0.6 602,958 - mutY OKGIIK_02565 0.45 +1.1 602,958 - mutY OKGIIK_02565 0.45 -2.0 602,958 - mutY OKGIIK_02565 0.45 -1.0 602,958 - mutY OKGIIK_02565 0.45 +0.5 602,958 - mutY OKGIIK_02565 0.45 -0.4 602,958 - mutY OKGIIK_02565 0.45 -1.4 602,958 - mutY OKGIIK_02565 0.45 -0.2 602,958 - mutY OKGIIK_02565 0.45 -1.6 602,958 - mutY OKGIIK_02565 0.45 -0.8 602,991 + mutY OKGIIK_02565 0.48 +0.3 602,991 + mutY OKGIIK_02565 0.48 -0.2 602,991 + mutY OKGIIK_02565 0.48 -0.1 602,991 + mutY OKGIIK_02565 0.48 -1.6 602,991 + mutY OKGIIK_02565 0.48 +1.2 602,991 + mutY OKGIIK_02565 0.48 +0.2 602,991 + mutY OKGIIK_02565 0.48 -0.7 602,992 - mutY OKGIIK_02565 0.48 -0.7 602,992 - mutY OKGIIK_02565 0.48 +0.9 602,992 - mutY OKGIIK_02565 0.48 +0.4 602,992 - mutY OKGIIK_02565 0.48 -0.6 602,992 - mutY OKGIIK_02565 0.48 +0.3 602,992 - mutY OKGIIK_02565 0.48 +0.6 602,992 - mutY OKGIIK_02565 0.48 -0.4 603,016 + mutY OKGIIK_02565 0.50 +0.5 603,016 + mutY OKGIIK_02565 0.50 -0.6 603,016 + mutY OKGIIK_02565 0.50 +0.6 603,016 + mutY OKGIIK_02565 0.50 +0.9 603,016 + mutY OKGIIK_02565 0.50 -0.5 603,016 + mutY OKGIIK_02565 0.50 -0.7 603,017 - mutY OKGIIK_02565 0.50 -2.6 603,017 - mutY OKGIIK_02565 0.50 +0.6 603,017 - mutY OKGIIK_02565 0.50 +2.4 603,017 - mutY OKGIIK_02565 0.50 -1.2 603,017 - mutY OKGIIK_02565 0.50 +1.0 603,017 - mutY OKGIIK_02565 0.50 +0.8 603,017 - mutY OKGIIK_02565 0.50 -0.6 603,017 - mutY OKGIIK_02565 0.50 -1.4 603,087 + mutY OKGIIK_02565 0.57 -0.6 603,087 + mutY OKGIIK_02565 0.57 -0.1 603,088 - mutY OKGIIK_02565 0.57 -2.4 603,088 - mutY OKGIIK_02565 0.57 -0.2 603,088 - mutY OKGIIK_02565 0.57 -1.1 603,282 + mutY OKGIIK_02565 0.75 +0.5 603,283 - mutY OKGIIK_02565 0.75 -0.2 603,283 - mutY OKGIIK_02565 0.75 +1.0 603,285 + mutY OKGIIK_02565 0.76 -1.1 603,285 + mutY OKGIIK_02565 0.76 -1.0 603,285 + mutY OKGIIK_02565 0.76 -0.2 603,285 + mutY OKGIIK_02565 0.76 +0.0 603,286 - mutY OKGIIK_02565 0.76 -2.0 603,286 - mutY OKGIIK_02565 0.76 +0.3 603,286 - mutY OKGIIK_02565 0.76 -0.7 603,378 + mutY OKGIIK_02565 0.84 +0.4 603,378 + mutY OKGIIK_02565 0.84 -0.4 603,378 + mutY OKGIIK_02565 0.84 +0.6 603,379 - mutY OKGIIK_02565 0.85 -0.9 603,379 - mutY OKGIIK_02565 0.85 -0.9 603,379 - mutY OKGIIK_02565 0.85 -0.9 603,379 - mutY OKGIIK_02565 0.85 +0.8 603,379 - mutY OKGIIK_02565 0.85 -0.7 603,379 - mutY OKGIIK_02565 0.85 -2.0 603,842 + OKGIIK_02570 0.29 -0.4 603,842 + OKGIIK_02570 0.29 +1.9 603,842 + OKGIIK_02570 0.29 -2.9 603,842 + OKGIIK_02570 0.29 -0.2 603,842 + OKGIIK_02570 0.29 +1.2 603,842 + OKGIIK_02570 0.29 -2.2 603,842 + OKGIIK_02570 0.29 -1.4 603,842 + OKGIIK_02570 0.29 +0.0 603,842 + OKGIIK_02570 0.29 +1.3 603,843 - OKGIIK_02570 0.29 -0.6 603,843 - OKGIIK_02570 0.29 -1.6 603,843 - OKGIIK_02570 0.29 -0.2 603,843 - OKGIIK_02570 0.29 -0.1 603,843 - OKGIIK_02570 0.29 -0.1 604,308 + OKGIIK_02570 0.73 -0.3 604,308 + OKGIIK_02570 0.73 -1.0 604,308 + OKGIIK_02570 0.73 -0.1 604,308 + OKGIIK_02570 0.73 +0.4 604,309 - OKGIIK_02570 0.73 +0.8 604,309 - OKGIIK_02570 0.73 -0.4 604,309 - OKGIIK_02570 0.73 -1.6 604,309 - OKGIIK_02570 0.73 -0.7 604,309 - OKGIIK_02570 0.73 -2.0 604,309 - OKGIIK_02570 0.73 -0.1 604,309 - OKGIIK_02570 0.73 +2.1 604,309 - OKGIIK_02570 0.73 -0.2 604,309 - OKGIIK_02570 0.73 -0.9 604,514 + -0.8 604,514 + +0.0 604,514 + -0.6 604,514 + -0.1 604,514 + +1.6 604,515 - -0.4 604,515 - +0.3 604,515 - +0.8 604,515 - -0.7 604,515 - +0.8
Or see this region's nucleotide sequence