Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_00710 and OKGIIK_00715 are separated by 122 nucleotides OKGIIK_00715 and ygjP are separated by 59 nucleotides ygjP and OKGIIK_00725 are separated by 2 nucleotides
OKGIIK_00710: OKGIIK_00710 - hypothetical protein, at 155,471 to 157,066
_00710
OKGIIK_00715: OKGIIK_00715 - glyoxalase, at 157,189 to 157,572
_00715
OKGIIK_00720: ygjP - metal-dependent hydrolase, at 157,632 to 158,150
ygjP
OKGIIK_00725: OKGIIK_00725 - DUF6348 domain-containing protein, at 158,153 to 158,797
_00725
Position (kb) 157
158 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 156.239 kb on + strand, within OKGIIK_00710 at 156.239 kb on + strand, within OKGIIK_00710 at 156.239 kb on + strand, within OKGIIK_00710 at 156.240 kb on - strand, within OKGIIK_00710 at 156.240 kb on - strand, within OKGIIK_00710 at 156.305 kb on + strand, within OKGIIK_00710 at 156.305 kb on + strand, within OKGIIK_00710 at 156.305 kb on + strand, within OKGIIK_00710 at 156.305 kb on + strand, within OKGIIK_00710 at 156.305 kb on + strand, within OKGIIK_00710 at 156.306 kb on - strand, within OKGIIK_00710 at 156.306 kb on - strand, within OKGIIK_00710 at 156.306 kb on - strand, within OKGIIK_00710 at 156.306 kb on - strand, within OKGIIK_00710 at 156.368 kb on + strand, within OKGIIK_00710 at 156.368 kb on + strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.369 kb on - strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.537 kb on + strand, within OKGIIK_00710 at 156.538 kb on - strand, within OKGIIK_00710 at 156.538 kb on - strand, within OKGIIK_00710 at 156.575 kb on + strand, within OKGIIK_00710 at 156.650 kb on + strand, within OKGIIK_00710 at 156.650 kb on + strand, within OKGIIK_00710 at 156.651 kb on - strand, within OKGIIK_00710 at 156.668 kb on + strand, within OKGIIK_00710 at 156.669 kb on - strand, within OKGIIK_00710 at 156.669 kb on - strand, within OKGIIK_00710 at 156.704 kb on + strand, within OKGIIK_00710 at 156.705 kb on - strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.737 kb on + strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.738 kb on - strand, within OKGIIK_00710 at 156.791 kb on + strand, within OKGIIK_00710 at 156.791 kb on + strand, within OKGIIK_00710 at 156.792 kb on - strand, within OKGIIK_00710 at 156.792 kb on - strand, within OKGIIK_00710 at 156.938 kb on + strand at 156.938 kb on + strand at 156.938 kb on + strand at 156.939 kb on - strand at 156.939 kb on - strand at 156.983 kb on + strand at 156.983 kb on + strand at 156.983 kb on + strand at 156.984 kb on - strand at 156.995 kb on + strand at 156.995 kb on + strand at 156.995 kb on + strand at 157.065 kb on - strand at 157.065 kb on - strand at 157.442 kb on + strand, within OKGIIK_00715 at 157.442 kb on + strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.443 kb on - strand, within OKGIIK_00715 at 157.597 kb on + strand at 157.597 kb on + strand at 157.597 kb on + strand at 157.598 kb on - strand at 157.616 kb on + strand at 157.617 kb on - strand at 157.624 kb on + strand at 157.624 kb on + strand at 157.625 kb on - strand at 157.647 kb on + strand at 157.647 kb on + strand at 157.647 kb on + strand at 157.647 kb on + strand at 157.647 kb on + strand at 157.659 kb on + strand at 157.660 kb on - strand at 157.773 kb on + strand, within ygjP at 157.773 kb on + strand, within ygjP at 157.773 kb on + strand, within ygjP at 157.773 kb on + strand, within ygjP at 157.773 kb on + strand, within ygjP at 157.774 kb on - strand, within ygjP at 157.774 kb on - strand, within ygjP at 157.774 kb on - strand, within ygjP at 157.779 kb on + strand, within ygjP at 157.779 kb on + strand, within ygjP at 157.779 kb on + strand, within ygjP at 157.779 kb on + strand, within ygjP at 157.780 kb on - strand, within ygjP at 157.780 kb on - strand, within ygjP at 157.780 kb on - strand, within ygjP at 157.780 kb on - strand, within ygjP at 157.780 kb on - strand, within ygjP at 157.839 kb on + strand, within ygjP at 157.839 kb on + strand, within ygjP at 157.839 kb on + strand, within ygjP at 157.839 kb on + strand, within ygjP at 157.840 kb on - strand, within ygjP at 157.840 kb on - strand, within ygjP at 157.840 kb on - strand, within ygjP at 157.840 kb on - strand, within ygjP at 157.840 kb on - strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.037 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.052 kb on + strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.053 kb on - strand, within ygjP at 158.067 kb on + strand, within ygjP at 158.097 kb on + strand, within ygjP at 158.097 kb on + strand, within ygjP at 158.097 kb on + strand, within ygjP at 158.097 kb on + strand, within ygjP at 158.098 kb on - strand, within ygjP at 158.098 kb on - strand, within ygjP at 158.106 kb on - strand at 158.177 kb on + strand at 158.177 kb on + strand at 158.177 kb on + strand at 158.177 kb on + strand at 158.177 kb on + strand at 158.177 kb on + strand at 158.178 kb on - strand at 158.178 kb on - strand at 158.178 kb on - strand at 158.178 kb on - strand at 158.450 kb on + strand, within OKGIIK_00725 at 158.450 kb on + strand, within OKGIIK_00725 at 158.450 kb on + strand, within OKGIIK_00725 at 158.450 kb on + strand, within OKGIIK_00725 at 158.450 kb on + strand, within OKGIIK_00725 at 158.450 kb on + strand, within OKGIIK_00725 at 158.450 kb on + strand, within OKGIIK_00725 at 158.451 kb on - strand, within OKGIIK_00725 at 158.451 kb on - strand, within OKGIIK_00725 at 158.451 kb on - strand, within OKGIIK_00725 at 158.451 kb on - strand, within OKGIIK_00725
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 156,239 + OKGIIK_00710 0.48 -0.4 156,239 + OKGIIK_00710 0.48 -1.0 156,239 + OKGIIK_00710 0.48 -1.0 156,240 - OKGIIK_00710 0.48 -0.4 156,240 - OKGIIK_00710 0.48 -0.7 156,305 + OKGIIK_00710 0.52 -0.4 156,305 + OKGIIK_00710 0.52 +1.2 156,305 + OKGIIK_00710 0.52 +0.8 156,305 + OKGIIK_00710 0.52 +0.8 156,305 + OKGIIK_00710 0.52 +0.3 156,306 - OKGIIK_00710 0.52 -1.7 156,306 - OKGIIK_00710 0.52 -1.0 156,306 - OKGIIK_00710 0.52 +0.3 156,306 - OKGIIK_00710 0.52 -2.2 156,368 + OKGIIK_00710 0.56 -2.2 156,368 + OKGIIK_00710 0.56 -2.0 156,369 - OKGIIK_00710 0.56 -1.2 156,369 - OKGIIK_00710 0.56 +0.3 156,369 - OKGIIK_00710 0.56 -1.5 156,369 - OKGIIK_00710 0.56 -2.0 156,369 - OKGIIK_00710 0.56 -1.8 156,369 - OKGIIK_00710 0.56 -1.8 156,369 - OKGIIK_00710 0.56 -0.7 156,369 - OKGIIK_00710 0.56 -1.2 156,369 - OKGIIK_00710 0.56 +0.8 156,369 - OKGIIK_00710 0.56 -0.7 156,537 + OKGIIK_00710 0.67 +0.5 156,537 + OKGIIK_00710 0.67 -0.6 156,537 + OKGIIK_00710 0.67 -0.5 156,537 + OKGIIK_00710 0.67 -1.2 156,537 + OKGIIK_00710 0.67 +0.7 156,537 + OKGIIK_00710 0.67 +0.8 156,537 + OKGIIK_00710 0.67 +1.3 156,537 + OKGIIK_00710 0.67 +0.8 156,537 + OKGIIK_00710 0.67 -1.5 156,537 + OKGIIK_00710 0.67 -2.5 156,537 + OKGIIK_00710 0.67 -1.0 156,538 - OKGIIK_00710 0.67 +0.9 156,538 - OKGIIK_00710 0.67 -0.7 156,575 + OKGIIK_00710 0.69 -1.1 156,650 + OKGIIK_00710 0.74 -0.2 156,650 + OKGIIK_00710 0.74 -0.4 156,651 - OKGIIK_00710 0.74 -2.0 156,668 + OKGIIK_00710 0.75 -0.4 156,669 - OKGIIK_00710 0.75 -1.2 156,669 - OKGIIK_00710 0.75 +0.3 156,704 + OKGIIK_00710 0.77 -0.8 156,705 - OKGIIK_00710 0.77 -0.7 156,737 + OKGIIK_00710 0.79 +0.9 156,737 + OKGIIK_00710 0.79 -0.5 156,737 + OKGIIK_00710 0.79 -0.7 156,737 + OKGIIK_00710 0.79 -2.9 156,737 + OKGIIK_00710 0.79 -0.2 156,737 + OKGIIK_00710 0.79 -0.8 156,737 + OKGIIK_00710 0.79 -0.2 156,737 + OKGIIK_00710 0.79 -1.5 156,738 - OKGIIK_00710 0.79 -2.1 156,738 - OKGIIK_00710 0.79 -0.7 156,738 - OKGIIK_00710 0.79 -4.9 156,738 - OKGIIK_00710 0.79 -0.2 156,738 - OKGIIK_00710 0.79 -0.7 156,738 - OKGIIK_00710 0.79 +0.1 156,738 - OKGIIK_00710 0.79 -2.5 156,738 - OKGIIK_00710 0.79 -1.0 156,738 - OKGIIK_00710 0.79 -0.7 156,738 - OKGIIK_00710 0.79 -0.1 156,738 - OKGIIK_00710 0.79 +0.8 156,738 - OKGIIK_00710 0.79 -2.2 156,791 + OKGIIK_00710 0.83 -2.4 156,791 + OKGIIK_00710 0.83 -0.2 156,792 - OKGIIK_00710 0.83 -1.0 156,792 - OKGIIK_00710 0.83 -0.2 156,938 + -1.0 156,938 + -0.1 156,938 + +0.5 156,939 - +1.3 156,939 - -0.4 156,983 + -1.6 156,983 + +0.2 156,983 + -1.8 156,984 - -0.2 156,995 + -0.7 156,995 + -2.1 156,995 + -1.0 157,065 - -1.0 157,065 - -1.0 157,442 + OKGIIK_00715 0.66 -1.0 157,442 + OKGIIK_00715 0.66 -1.4 157,443 - OKGIIK_00715 0.66 -0.1 157,443 - OKGIIK_00715 0.66 +0.4 157,443 - OKGIIK_00715 0.66 -0.4 157,443 - OKGIIK_00715 0.66 -1.5 157,443 - OKGIIK_00715 0.66 -0.7 157,443 - OKGIIK_00715 0.66 -1.2 157,443 - OKGIIK_00715 0.66 -1.0 157,597 + +0.4 157,597 + -0.1 157,597 + +1.7 157,598 - +0.1 157,616 + -1.8 157,617 - -1.7 157,624 + -1.7 157,624 + +0.1 157,625 - +0.0 157,647 + -0.2 157,647 + +1.1 157,647 + -1.2 157,647 + -1.0 157,647 + -2.1 157,659 + +0.2 157,660 - -0.7 157,773 + ygjP OKGIIK_00720 0.27 -2.0 157,773 + ygjP OKGIIK_00720 0.27 -2.0 157,773 + ygjP OKGIIK_00720 0.27 -0.2 157,773 + ygjP OKGIIK_00720 0.27 -2.4 157,773 + ygjP OKGIIK_00720 0.27 -1.1 157,774 - ygjP OKGIIK_00720 0.27 +0.3 157,774 - ygjP OKGIIK_00720 0.27 -1.0 157,774 - ygjP OKGIIK_00720 0.27 -1.0 157,779 + ygjP OKGIIK_00720 0.28 +1.6 157,779 + ygjP OKGIIK_00720 0.28 -1.2 157,779 + ygjP OKGIIK_00720 0.28 -1.0 157,779 + ygjP OKGIIK_00720 0.28 -1.2 157,780 - ygjP OKGIIK_00720 0.29 -1.7 157,780 - ygjP OKGIIK_00720 0.29 +1.1 157,780 - ygjP OKGIIK_00720 0.29 -2.5 157,780 - ygjP OKGIIK_00720 0.29 -1.0 157,780 - ygjP OKGIIK_00720 0.29 +0.3 157,839 + ygjP OKGIIK_00720 0.40 -0.2 157,839 + ygjP OKGIIK_00720 0.40 -0.0 157,839 + ygjP OKGIIK_00720 0.40 +0.9 157,839 + ygjP OKGIIK_00720 0.40 +1.3 157,840 - ygjP OKGIIK_00720 0.40 -0.2 157,840 - ygjP OKGIIK_00720 0.40 -1.2 157,840 - ygjP OKGIIK_00720 0.40 -0.7 157,840 - ygjP OKGIIK_00720 0.40 -0.7 157,840 - ygjP OKGIIK_00720 0.40 -0.7 158,037 + ygjP OKGIIK_00720 0.78 -2.1 158,037 + ygjP OKGIIK_00720 0.78 -1.7 158,037 + ygjP OKGIIK_00720 0.78 -1.0 158,037 + ygjP OKGIIK_00720 0.78 -0.2 158,037 + ygjP OKGIIK_00720 0.78 -1.2 158,037 + ygjP OKGIIK_00720 0.78 -1.5 158,037 + ygjP OKGIIK_00720 0.78 -1.4 158,037 + ygjP OKGIIK_00720 0.78 -0.7 158,052 + ygjP OKGIIK_00720 0.81 -1.4 158,052 + ygjP OKGIIK_00720 0.81 -0.7 158,052 + ygjP OKGIIK_00720 0.81 -0.5 158,052 + ygjP OKGIIK_00720 0.81 +1.1 158,052 + ygjP OKGIIK_00720 0.81 -0.6 158,052 + ygjP OKGIIK_00720 0.81 -0.7 158,052 + ygjP OKGIIK_00720 0.81 -1.2 158,052 + ygjP OKGIIK_00720 0.81 -1.7 158,052 + ygjP OKGIIK_00720 0.81 -1.6 158,052 + ygjP OKGIIK_00720 0.81 -1.0 158,052 + ygjP OKGIIK_00720 0.81 +0.2 158,052 + ygjP OKGIIK_00720 0.81 -0.3 158,052 + ygjP OKGIIK_00720 0.81 -1.5 158,052 + ygjP OKGIIK_00720 0.81 +0.0 158,053 - ygjP OKGIIK_00720 0.81 -0.2 158,053 - ygjP OKGIIK_00720 0.81 +0.3 158,053 - ygjP OKGIIK_00720 0.81 -1.2 158,053 - ygjP OKGIIK_00720 0.81 -1.0 158,053 - ygjP OKGIIK_00720 0.81 +0.3 158,053 - ygjP OKGIIK_00720 0.81 +0.7 158,053 - ygjP OKGIIK_00720 0.81 +0.8 158,053 - ygjP OKGIIK_00720 0.81 -1.2 158,053 - ygjP OKGIIK_00720 0.81 -0.3 158,053 - ygjP OKGIIK_00720 0.81 +0.1 158,067 + ygjP OKGIIK_00720 0.84 -1.0 158,097 + ygjP OKGIIK_00720 0.90 +0.5 158,097 + ygjP OKGIIK_00720 0.90 +1.1 158,097 + ygjP OKGIIK_00720 0.90 +0.9 158,097 + ygjP OKGIIK_00720 0.90 +1.3 158,098 - ygjP OKGIIK_00720 0.90 -0.7 158,098 - ygjP OKGIIK_00720 0.90 -0.2 158,106 - -0.7 158,177 + -1.7 158,177 + -0.2 158,177 + -1.0 158,177 + -2.0 158,177 + +0.6 158,177 + -0.6 158,178 - -0.7 158,178 - -0.5 158,178 - -1.1 158,178 - -1.2 158,450 + OKGIIK_00725 0.46 -0.4 158,450 + OKGIIK_00725 0.46 +0.3 158,450 + OKGIIK_00725 0.46 +0.2 158,450 + OKGIIK_00725 0.46 -0.5 158,450 + OKGIIK_00725 0.46 -1.8 158,450 + OKGIIK_00725 0.46 -0.4 158,450 + OKGIIK_00725 0.46 -0.7 158,451 - OKGIIK_00725 0.46 +1.2 158,451 - OKGIIK_00725 0.46 -2.0 158,451 - OKGIIK_00725 0.46 -1.0 158,451 - OKGIIK_00725 0.46 -0.2
Or see this region's nucleotide sequence