Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05985

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
138,836	+		MPMX19_05983	0.51	-2.3
138,836	+		MPMX19_05983	0.51	+2.2
138,836	+		MPMX19_05983	0.51	+0.1
138,836	+		MPMX19_05983	0.51	+0.4
138,837	-		MPMX19_05983	0.52	-1.7
138,837	-		MPMX19_05983	0.52	-1.7
138,860	+		MPMX19_05983	0.53	+0.3
138,860	+		MPMX19_05983	0.53	-1.6
138,860	+		MPMX19_05983	0.53	-0.9
138,860	+		MPMX19_05983	0.53	+0.0
138,860	+		MPMX19_05983	0.53	+0.2
138,860	+		MPMX19_05983	0.53	-0.6
138,860	+		MPMX19_05983	0.53	+0.3
138,860	+		MPMX19_05983	0.53	-0.9
138,861	-		MPMX19_05983	0.54	+2.6
138,861	-		MPMX19_05983	0.54	+0.0
138,983	+		MPMX19_05983	0.64	+0.1
138,983	+		MPMX19_05983	0.64	-1.0
138,983	+		MPMX19_05983	0.64	+0.1
138,983	+		MPMX19_05983	0.64	-1.3
138,983	+		MPMX19_05983	0.64	+0.6
138,983	+		MPMX19_05983	0.64	-0.1
138,983	+		MPMX19_05983	0.64	+2.3
138,983	+		MPMX19_05983	0.64	-1.6
138,983	+		MPMX19_05983	0.64	+0.4
138,984	-		MPMX19_05983	0.64	-1.4
138,984	-		MPMX19_05983	0.64	+0.5
138,984	-		MPMX19_05983	0.64	+0.3
138,984	-		MPMX19_05983	0.64	+0.8
138,984	-		MPMX19_05983	0.64	+0.2
139,097	+		MPMX19_05983	0.74	+1.6
139,097	+		MPMX19_05983	0.74	-0.9
139,097	+		MPMX19_05983	0.74	+0.1
139,097	+		MPMX19_05983	0.74	-2.0
139,097	+		MPMX19_05983	0.74	+1.3
139,097	+		MPMX19_05983	0.74	-2.0
139,097	+		MPMX19_05983	0.74	-1.4
139,098	-		MPMX19_05983	0.74	+0.4
139,098	-		MPMX19_05983	0.74	-0.5
139,098	-		MPMX19_05983	0.74	-0.1
139,098	-		MPMX19_05983	0.74	-0.1
139,098	-		MPMX19_05983	0.74	+1.1
139,151	+		MPMX19_05983	0.79	+0.0
139,151	+		MPMX19_05983	0.79	-0.2
139,151	+		MPMX19_05983	0.79	-0.9
139,151	+		MPMX19_05983	0.79	-1.9
139,151	+		MPMX19_05983	0.79	+0.4
139,151	+		MPMX19_05983	0.79	-1.9
139,151	+		MPMX19_05983	0.79	+0.0
139,151	+		MPMX19_05983	0.79	-2.7
139,151	+		MPMX19_05983	0.79	-0.1
139,151	+		MPMX19_05983	0.79	-0.3
139,151	+		MPMX19_05983	0.79	-0.8
139,152	-		MPMX19_05983	0.79	+2.0
139,152	-		MPMX19_05983	0.79	+0.0
139,152	-		MPMX19_05983	0.79	-0.7
139,152	-		MPMX19_05983	0.79	+0.8
139,152	-		MPMX19_05983	0.79	+0.6
139,152	-		MPMX19_05983	0.79	-1.0
139,152	-		MPMX19_05983	0.79	+0.6
139,152	-		MPMX19_05983	0.79	-1.7
139,152	-		MPMX19_05983	0.79	-1.5
139,152	-		MPMX19_05983	0.79	-1.4
139,152	-		MPMX19_05983	0.79	-0.4
139,152	-		MPMX19_05983	0.79	-0.6
139,152	-		MPMX19_05983	0.79	-0.9
139,152	-		MPMX19_05983	0.79	-0.3
139,152	-		MPMX19_05983	0.79	-1.1
139,152	-		MPMX19_05983	0.79	-1.4
139,152	-		MPMX19_05983	0.79	-2.3
139,152	-		MPMX19_05983	0.79	-0.9
139,152	-		MPMX19_05983	0.79	+1.1
139,152	-		MPMX19_05983	0.79	-2.8
139,152	-		MPMX19_05983	0.79	-1.2
139,199	+		MPMX19_05983	0.83	-2.5
139,199	+		MPMX19_05983	0.83	+0.8
139,199	+		MPMX19_05983	0.83	+0.6
139,199	+		MPMX19_05983	0.83	-0.3
139,199	+		MPMX19_05983	0.83	-1.1
139,200	-		MPMX19_05983	0.83	-0.4
139,200	-		MPMX19_05983	0.83	-1.6
139,200	-		MPMX19_05983	0.83	-1.1
139,200	-		MPMX19_05983	0.83	-0.4
139,200	-		MPMX19_05983	0.83	+0.6
139,200	-		MPMX19_05983	0.83	+0.4
139,200	-		MPMX19_05983	0.83	+0.4
139,200	-		MPMX19_05983	0.83	-0.2
139,200	-		MPMX19_05983	0.83	-0.4
139,200	-		MPMX19_05983	0.83	-0.6
139,208	+		MPMX19_05983	0.83	-0.1
139,208	+		MPMX19_05983	0.83	+0.0
139,208	+		MPMX19_05983	0.83	-0.1
139,209	-		MPMX19_05983	0.84	+1.6
139,209	-		MPMX19_05983	0.84	+1.1
139,209	-		MPMX19_05983	0.84	-0.9
139,209	-		MPMX19_05983	0.84	+0.4
139,209	-		MPMX19_05983	0.84	+0.3
139,209	-		MPMX19_05983	0.84	-1.9
139,209	-		MPMX19_05983	0.84	+0.6
139,209	-		MPMX19_05983	0.84	-0.1
139,209	-		MPMX19_05983	0.84	-0.9
139,209	-		MPMX19_05983	0.84	+0.1
139,209	-		MPMX19_05983	0.84	+0.1
139,209	-		MPMX19_05983	0.84	+0.8
139,209	-		MPMX19_05983	0.84	+0.0
139,209	-		MPMX19_05983	0.84	-0.3
139,397	+				-0.4
139,397	+				-0.2
139,397	+				+0.9
139,398	-				+0.8
139,398	-				-0.8
139,668	+				+0.3
139,668	+				+0.3
139,668	+				-0.7
139,669	-				+0.4
139,669	-				-3.4
139,669	-				-2.0
139,712	+				-2.3
139,712	+				+0.3
139,713	-				+1.9
139,713	-				-2.0
139,713	-				+0.9
139,949	+		MPMX19_05985	0.29	+1.0
139,949	+		MPMX19_05985	0.29	-1.3
139,949	+		MPMX19_05985	0.29	-1.8
139,950	-		MPMX19_05985	0.29	-0.5
139,950	-		MPMX19_05985	0.29	-0.5
139,950	-		MPMX19_05985	0.29	-0.3
139,950	-		MPMX19_05985	0.29	-1.2
140,189	+		MPMX19_05985	0.72	+1.0
140,189	+		MPMX19_05985	0.72	-0.3
140,189	+		MPMX19_05985	0.72	-0.4
140,189	+		MPMX19_05985	0.72	-0.8
140,189	+		MPMX19_05985	0.72	-2.0
140,189	+		MPMX19_05985	0.72	-0.2
140,189	+		MPMX19_05985	0.72	-1.4
140,189	+		MPMX19_05985	0.72	-0.2
140,189	+		MPMX19_05985	0.72	-0.2
140,189	+		MPMX19_05985	0.72	+0.2
140,189	+		MPMX19_05985	0.72	+1.1
140,189	+		MPMX19_05985	0.72	-0.2
140,189	+		MPMX19_05985	0.72	+2.5
140,189	+		MPMX19_05985	0.72	+0.0
140,189	+		MPMX19_05985	0.72	-0.3
140,189	+		MPMX19_05985	0.72	+0.8
140,189	+		MPMX19_05985	0.72	-1.2
140,189	+		MPMX19_05985	0.72	+0.0
140,190	-		MPMX19_05985	0.72	-0.9
140,190	-		MPMX19_05985	0.72	+0.0
140,190	-		MPMX19_05985	0.72	+1.0
140,190	-		MPMX19_05985	0.72	+0.7
140,190	-		MPMX19_05985	0.72	-1.2
140,190	-		MPMX19_05985	0.72	-0.3
140,190	-		MPMX19_05985	0.72	+0.6
140,190	-		MPMX19_05985	0.72	-0.4
140,190	-		MPMX19_05985	0.72	-0.8
140,190	-		MPMX19_05985	0.72	+0.4
140,190	-		MPMX19_05985	0.72	-0.9
140,190	-		MPMX19_05985	0.72	-0.6
140,190	-		MPMX19_05985	0.72	-1.1
140,190	-		MPMX19_05985	0.72	-0.1
140,190	-		MPMX19_05985	0.72	-2.1
140,190	-		MPMX19_05985	0.72	+1.5
140,225	+		MPMX19_05985	0.79	-0.8
140,225	+		MPMX19_05985	0.79	+0.4
140,225	+		MPMX19_05985	0.79	-1.4
140,225	+		MPMX19_05985	0.79	-0.6
140,225	+		MPMX19_05985	0.79	-0.6
140,225	+		MPMX19_05985	0.79	-0.7
140,225	+		MPMX19_05985	0.79	+1.1
140,225	+		MPMX19_05985	0.79	-0.6
140,225	+		MPMX19_05985	0.79	-0.4
140,225	+		MPMX19_05985	0.79	-0.2
140,225	+		MPMX19_05985	0.79	-0.7
140,225	+		MPMX19_05985	0.79	+0.0
140,225	+		MPMX19_05985	0.79	-0.3
140,225	+		MPMX19_05985	0.79	-0.4
140,225	+		MPMX19_05985	0.79	-1.2
140,226	-		MPMX19_05985	0.79	-0.7
140,226	-		MPMX19_05985	0.79	-1.0
140,226	-		MPMX19_05985	0.79	-0.1
140,226	-		MPMX19_05985	0.79	-2.6
140,226	-		MPMX19_05985	0.79	-1.9
140,226	-		MPMX19_05985	0.79	-0.7
140,226	-		MPMX19_05985	0.79	-1.2
140,226	-		MPMX19_05985	0.79	+0.2
140,226	-		MPMX19_05985	0.79	+0.1
140,226	-		MPMX19_05985	0.79	+0.4
140,226	-		MPMX19_05985	0.79	+0.0
140,303	+				+0.1
140,303	+				-0.8
140,303	+				+0.3
140,303	+				+0.0
140,303	+				+0.6
140,303	+				-0.7
140,303	+				-0.1
140,303	+				+0.3
140,303	+				-0.8
140,303	+				-0.5
140,303	+				+0.1
140,303	+				-1.4
140,303	+				+0.5
140,303	+				-0.9
140,303	+				-0.7
140,304	-				-0.3
140,304	-				-1.1
140,304	-				-0.1
140,304	-				-1.5
140,304	-				+1.3
140,304	-				-0.1
140,304	-				+0.4
140,304	-				+0.7
140,304	-				+0.4
140,304	-				-1.5
140,304	-				-1.4
140,304	-				-0.2
140,304	-				+0.7
140,304	-				-1.5
140,304	-				-1.2
140,304	-				-0.8
140,304	-				-0.5
140,304	-				-2.5
140,304	-				-1.4
140,304	-				+0.9
140,304	-				+0.4
140,304	-				-0.2
140,304	-				-0.7
140,304	-				+0.9
140,304	-				-1.0
140,304	-				+0.3
140,677	+				+1.1
140,677	+				+1.0
140,677	+				-3.2
140,677	+				+0.7
140,677	+				-0.4
140,677	+				-0.3
140,677	+				-0.6
140,677	+				+0.2
140,678	-				-1.1
140,678	-				-1.2
140,678	-				-1.0
140,678	-				-1.6
140,678	-				+0.4
140,678	-				-0.8
140,678	-				+1.0
140,678	-				+0.4
140,686	+				-1.8
140,687	-				-1.3
140,687	-				-1.4
140,687	-				+0.4
140,803	+		MPMX19_05986	0.16	-0.9
140,803	+		MPMX19_05986	0.16	-0.2
140,803	+		MPMX19_05986	0.16	-1.2
140,803	+		MPMX19_05986	0.16	+0.1
140,803	+		MPMX19_05986	0.16	-1.2
140,803	+		MPMX19_05986	0.16	-0.4
140,803	+		MPMX19_05986	0.16	-2.3
140,804	-		MPMX19_05986	0.16	+0.3
140,804	-		MPMX19_05986	0.16	-0.6
140,804	-		MPMX19_05986	0.16	-1.6
140,804	-		MPMX19_05986	0.16	-2.0
140,804	-		MPMX19_05986	0.16	+0.0
140,804	-		MPMX19_05986	0.16	-1.6
140,804	-		MPMX19_05986	0.16	-1.3
140,845	+		MPMX19_05986	0.19	-1.3
140,845	+		MPMX19_05986	0.19	-1.2
140,845	+		MPMX19_05986	0.19	-0.7
140,845	+		MPMX19_05986	0.19	-0.9
140,845	+		MPMX19_05986	0.19	-0.3
140,845	+		MPMX19_05986	0.19	-1.1
140,845	+		MPMX19_05986	0.19	+0.1
140,845	+		MPMX19_05986	0.19	-0.9
140,845	+		MPMX19_05986	0.19	-0.4
140,845	+		MPMX19_05986	0.19	-0.6
140,845	+		MPMX19_05986	0.19	-1.4
140,845	+		MPMX19_05986	0.19	-2.4
140,845	+		MPMX19_05986	0.19	-0.7
140,845	+		MPMX19_05986	0.19	-1.0
140,846	-		MPMX19_05986	0.19	+0.3
140,846	-		MPMX19_05986	0.19	-1.0
140,846	-		MPMX19_05986	0.19	-1.0
140,846	-		MPMX19_05986	0.19	+0.8
140,846	-		MPMX19_05986	0.19	+0.4
140,846	-		MPMX19_05986	0.19	-0.5
140,846	-		MPMX19_05986	0.19	+0.1
140,846	-		MPMX19_05986	0.19	-0.6
140,846	-		MPMX19_05986	0.19	-1.1
140,980	+		MPMX19_05986	0.28	-1.0
140,980	+		MPMX19_05986	0.28	+1.2
140,980	+		MPMX19_05986	0.28	-0.1
140,980	+		MPMX19_05986	0.28	-0.1
140,980	+		MPMX19_05986	0.28	-0.3
140,980	+		MPMX19_05986	0.28	-0.4
140,980	+		MPMX19_05986	0.28	+0.2
140,980	+		MPMX19_05986	0.28	+0.6
140,980	+		MPMX19_05986	0.28	+0.5
140,980	+		MPMX19_05986	0.28	-2.0
140,980	+		MPMX19_05986	0.28	+0.2
140,980	+		MPMX19_05986	0.28	-0.4
140,980	+		MPMX19_05986	0.28	-0.2
140,981	-		MPMX19_05986	0.28	+1.6
140,981	-		MPMX19_05986	0.28	+0.0
140,981	-		MPMX19_05986	0.28	-0.8
140,981	-		MPMX19_05986	0.28	-1.7
140,981	-		MPMX19_05986	0.28	-0.7
141,016	+		MPMX19_05986	0.30	-1.9
141,016	+		MPMX19_05986	0.30	-0.5
141,016	+		MPMX19_05986	0.30	+0.5
141,016	+		MPMX19_05986	0.30	-1.4
141,016	+		MPMX19_05986	0.30	-1.3
141,016	+		MPMX19_05986	0.30	-1.8
141,016	+		MPMX19_05986	0.30	-0.0
141,016	+		MPMX19_05986	0.30	+0.9
141,017	-		MPMX19_05986	0.30	-0.4
141,017	-		MPMX19_05986	0.30	+0.6
141,017	-		MPMX19_05986	0.30	-1.1
141,017	-		MPMX19_05986	0.30	+0.4
141,017	-		MPMX19_05986	0.30	-1.2
141,017	-		MPMX19_05986	0.30	-1.7
141,017	-		MPMX19_05986	0.30	-0.3
141,017	-		MPMX19_05986	0.30	-2.6
141,017	-		MPMX19_05986	0.30	-0.1
141,017	-		MPMX19_05986	0.30	+0.0
141,017	-		MPMX19_05986	0.30	+0.8
141,038	+		MPMX19_05986	0.32	+0.3
141,039	-		MPMX19_05986	0.32	+0.7
141,295	+		MPMX19_05986	0.49	+1.3
141,295	+		MPMX19_05986	0.49	-1.0
141,295	+		MPMX19_05986	0.49	+2.9
141,295	+		MPMX19_05986	0.49	-0.7
141,295	+		MPMX19_05986	0.49	+0.4
141,295	+		MPMX19_05986	0.49	+0.6
141,295	+		MPMX19_05986	0.49	+0.9
141,295	+		MPMX19_05986	0.49	-0.1
141,295	+		MPMX19_05986	0.49	-0.4
141,296	-		MPMX19_05986	0.49	+0.4
141,296	-		MPMX19_05986	0.49	-0.7
141,296	-		MPMX19_05986	0.49	-1.1
141,296	-		MPMX19_05986	0.49	+0.6
141,296	-		MPMX19_05986	0.49	-0.2
141,296	-		MPMX19_05986	0.49	+0.3
141,296	-		MPMX19_05986	0.49	-0.1