Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01171

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,209,534	-				+0.6
1,209,583	-				-2.7
1,209,620	-				-0.8
1,209,620	-				-0.7
1,209,620	-				+0.4
1,209,620	-				-0.8
1,209,832	+		MPMX19_01171	0.28	-2.0
1,209,832	+		MPMX19_01171	0.28	+0.3
1,209,832	+		MPMX19_01171	0.28	-0.1
1,209,833	-		MPMX19_01171	0.28	-1.4
1,209,833	-		MPMX19_01171	0.28	+0.1
1,209,924	+		MPMX19_01171	0.41	-1.5
1,209,924	+		MPMX19_01171	0.41	-1.1
1,209,924	+		MPMX19_01171	0.41	-1.0
1,209,924	+		MPMX19_01171	0.41	-2.2
1,209,924	+		MPMX19_01171	0.41	+0.2
1,209,925	-		MPMX19_01171	0.41	+0.2
1,209,925	-		MPMX19_01171	0.41	+0.6
1,209,925	-		MPMX19_01171	0.41	+0.5
1,209,925	-		MPMX19_01171	0.41	-0.7
1,209,925	-		MPMX19_01171	0.41	-0.0
1,209,925	-		MPMX19_01171	0.41	-1.8
1,209,925	-		MPMX19_01171	0.41	+0.1
1,209,925	-		MPMX19_01171	0.41	-1.6
1,209,925	-		MPMX19_01171	0.41	+0.2
1,210,035	+		MPMX19_01171	0.57	+0.0
1,210,036	-		MPMX19_01171	0.57	+0.2
1,210,098	+		MPMX19_01171	0.66	-0.6
1,210,098	+		MPMX19_01171	0.66	-0.1
1,210,098	+		MPMX19_01171	0.66	-0.6
1,210,098	+		MPMX19_01171	0.66	-0.1
1,210,098	+		MPMX19_01171	0.66	-0.3
1,210,098	+		MPMX19_01171	0.66	-1.1
1,210,098	+		MPMX19_01171	0.66	+0.6
1,210,098	+		MPMX19_01171	0.66	-3.0
1,210,099	-		MPMX19_01171	0.66	+2.5
1,210,099	-		MPMX19_01171	0.66	-1.7
1,210,099	-		MPMX19_01171	0.66	-1.3
1,210,099	-		MPMX19_01171	0.66	-0.1
1,210,099	-		MPMX19_01171	0.66	-0.7
1,210,099	-		MPMX19_01171	0.66	+0.5
1,210,171	+		MPMX19_01171	0.76	+1.8
1,210,171	+		MPMX19_01171	0.76	-0.4
1,210,171	+		MPMX19_01171	0.76	+0.0
1,210,171	+		MPMX19_01171	0.76	-1.3
1,210,171	+		MPMX19_01171	0.76	-1.3
1,210,171	+		MPMX19_01171	0.76	-1.4
1,210,171	+		MPMX19_01171	0.76	+0.3
1,210,171	+		MPMX19_01171	0.76	+0.3
1,210,171	+		MPMX19_01171	0.76	+0.2
1,210,171	+		MPMX19_01171	0.76	-0.7
1,210,171	+		MPMX19_01171	0.76	-0.1
1,210,171	+		MPMX19_01171	0.76	-1.0
1,210,171	+		MPMX19_01171	0.76	-1.5
1,210,171	+		MPMX19_01171	0.76	+0.8
1,210,171	+		MPMX19_01171	0.76	-0.1
1,210,171	+		MPMX19_01171	0.76	-1.4
1,210,172	-		MPMX19_01171	0.77	+0.3
1,210,172	-		MPMX19_01171	0.77	+0.3
1,210,172	-		MPMX19_01171	0.77	-0.5
1,210,172	-		MPMX19_01171	0.77	-0.6
1,210,172	-		MPMX19_01171	0.77	-0.5
1,210,172	-		MPMX19_01171	0.77	+0.5
1,210,172	-		MPMX19_01171	0.77	-0.5
1,210,172	-		MPMX19_01171	0.77	+2.1
1,210,172	-		MPMX19_01171	0.77	+1.1
1,210,172	-		MPMX19_01171	0.77	-1.1
1,210,172	-		MPMX19_01171	0.77	-0.2
1,210,172	-		MPMX19_01171	0.77	+1.1
1,210,172	-		MPMX19_01171	0.77	+1.1
1,210,172	-		MPMX19_01171	0.77	-1.5
1,210,172	-		MPMX19_01171	0.77	-1.8
1,210,172	-		MPMX19_01171	0.77	-1.2
1,210,213	+		MPMX19_01171	0.83	+0.8
1,210,214	-		MPMX19_01171	0.83	+0.6
1,210,230	+		MPMX19_01171	0.85	+0.4
1,210,230	+		MPMX19_01171	0.85	-0.2
1,210,230	+		MPMX19_01171	0.85	+0.8
1,210,231	-		MPMX19_01171	0.85	-0.1
1,210,231	-		MPMX19_01171	0.85	+0.5
1,210,231	-		MPMX19_01171	0.85	-1.3
1,210,231	-		MPMX19_01171	0.85	-1.7
1,210,231	-		MPMX19_01171	0.85	+0.7
1,210,305	+				-0.3
1,210,305	+				+0.4
1,210,306	-				-0.3
1,210,306	-				-1.5
1,210,306	-				+0.4
1,210,306	-				+0.1
1,210,320	+				-0.2
1,210,320	+				+0.8
1,210,321	-				+0.2
1,210,321	-				+0.2
1,210,334	+				+0.1
1,210,368	-				-0.4
1,210,368	-				-1.8
1,210,368	-				-0.2
1,210,415	+				-0.3
1,210,415	+				-1.3
1,210,415	+				-1.3
1,210,415	+				-1.5
1,210,415	+				+0.8
1,210,415	+				-0.1
1,210,415	+				+0.5
1,210,415	+				-1.8
1,210,415	+				+1.2
1,210,415	+				-1.2
1,210,415	+				-0.7
1,210,415	+				+0.5
1,210,415	+				-0.1
1,210,415	+				-1.5
1,210,415	+				+2.2
1,210,416	-				-0.8
1,210,416	-				-3.0
1,210,416	-				+0.3
1,210,416	-				-0.1
1,210,416	-				-0.3
1,210,416	-				-0.8
1,210,416	-				-0.7
1,210,416	-				+0.5
1,210,416	-				-2.1
1,210,416	-				-0.5
1,210,416	-				-0.2
1,210,416	-				+0.9
1,210,416	-				-1.7
1,210,416	-				+0.2
1,210,457	+				-1.6
1,210,458	-				-0.4
1,210,458	-				-0.2
1,210,666	+				-1.7
1,210,682	+				-2.8
1,210,682	+				-0.4
1,210,682	+				+0.1
1,210,682	+				-0.2
1,210,683	-				+0.3
1,210,683	-				-0.5
1,210,683	-				-1.7
1,210,683	-				-0.6
1,210,683	-				-0.4
1,210,763	+				-0.4
1,210,763	+				-0.1
1,210,763	+				-0.1
1,210,763	+				-1.0
1,210,763	+				-0.2
1,210,763	+				-0.1
1,210,763	+				+1.5
1,210,763	+				+0.3
1,210,763	+				-0.1
1,210,763	+				-0.4
1,210,763	+				-0.7
1,210,763	+				-1.0
1,210,763	+				-1.2
1,210,763	+				+0.8
1,210,763	+				+0.8
1,210,763	+				-0.2
1,210,763	+				-0.5
1,210,763	+				+1.1
1,210,763	+				-0.9
1,210,763	+				-0.1
1,210,763	+				+0.6
1,210,763	+				+0.5
1,210,763	+				-0.1
1,210,763	+				-1.2
1,210,763	+				-0.4
1,210,764	-				-0.6
1,210,764	-				-0.7
1,210,764	-				-1.8
1,210,764	-				-1.3
1,210,764	-				-1.7
1,210,764	-				-1.2
1,210,764	-				-1.6
1,210,764	-				-0.2
1,210,764	-				+0.7
1,210,764	-				+1.5
1,210,764	-				-1.1
1,210,764	-				-0.7
1,210,764	-				+0.5
1,210,764	-				-0.5
1,210,764	-				-1.2
1,210,764	-				-2.2
1,210,764	-				-1.4
1,210,764	-				+0.4
1,210,764	-				-0.6
1,210,809	+		MPMX19_01172	0.13	-0.3
1,210,809	+		MPMX19_01172	0.13	+0.0
1,210,810	-		MPMX19_01172	0.13	+2.5
1,210,810	-		MPMX19_01172	0.13	+0.3
1,210,810	-		MPMX19_01172	0.13	-0.1
1,210,810	-		MPMX19_01172	0.13	-1.3
1,210,810	-		MPMX19_01172	0.13	+0.8
1,211,048	+		MPMX19_01172	0.33	-0.8
1,211,048	+		MPMX19_01172	0.33	-0.4
1,211,048	+		MPMX19_01172	0.33	-1.1
1,211,048	+		MPMX19_01172	0.33	-1.0
1,211,048	+		MPMX19_01172	0.33	-0.1
1,211,048	+		MPMX19_01172	0.33	-1.3
1,211,048	+		MPMX19_01172	0.33	-0.4
1,211,048	+		MPMX19_01172	0.33	-1.5
1,211,048	+		MPMX19_01172	0.33	+0.3
1,211,048	+		MPMX19_01172	0.33	-1.3
1,211,048	+		MPMX19_01172	0.33	-2.1
1,211,048	+		MPMX19_01172	0.33	+2.1
1,211,048	+		MPMX19_01172	0.33	-0.1
1,211,048	+		MPMX19_01172	0.33	+0.9
1,211,048	+		MPMX19_01172	0.33	-0.7
1,211,048	+		MPMX19_01172	0.33	+1.9
1,211,048	+		MPMX19_01172	0.33	+0.4
1,211,048	+		MPMX19_01172	0.33	+1.3
1,211,048	+		MPMX19_01172	0.33	+0.3
1,211,048	+		MPMX19_01172	0.33	+0.2
1,211,048	+		MPMX19_01172	0.33	+0.3
1,211,048	+		MPMX19_01172	0.33	-0.9
1,211,048	+		MPMX19_01172	0.33	+0.4
1,211,048	+		MPMX19_01172	0.33	-0.9
1,211,048	+		MPMX19_01172	0.33	+0.5
1,211,048	+		MPMX19_01172	0.33	-2.0
1,211,048	+		MPMX19_01172	0.33	+1.7
1,211,048	+		MPMX19_01172	0.33	-1.0
1,211,048	+		MPMX19_01172	0.33	+0.8
1,211,048	+		MPMX19_01172	0.33	-1.0
1,211,048	+		MPMX19_01172	0.33	-0.3
1,211,049	-		MPMX19_01172	0.33	+1.8
1,211,049	-		MPMX19_01172	0.33	-0.2
1,211,049	-		MPMX19_01172	0.33	-1.1
1,211,049	-		MPMX19_01172	0.33	+0.0
1,211,049	-		MPMX19_01172	0.33	+0.0
1,211,049	-		MPMX19_01172	0.33	-1.2
1,211,049	-		MPMX19_01172	0.33	+0.2
1,211,049	-		MPMX19_01172	0.33	-1.0
1,211,049	-		MPMX19_01172	0.33	-0.6
1,211,049	-		MPMX19_01172	0.33	-1.8
1,211,049	-		MPMX19_01172	0.33	+1.5
1,211,049	-		MPMX19_01172	0.33	-0.1
1,211,049	-		MPMX19_01172	0.33	-0.4
1,211,049	-		MPMX19_01172	0.33	-1.8
1,211,049	-		MPMX19_01172	0.33	-1.1
1,211,049	-		MPMX19_01172	0.33	-0.4
1,211,049	-		MPMX19_01172	0.33	+0.4
1,211,049	-		MPMX19_01172	0.33	-1.8
1,211,049	-		MPMX19_01172	0.33	+0.2
1,211,049	-		MPMX19_01172	0.33	-1.2
1,211,049	-		MPMX19_01172	0.33	+0.1
1,211,049	-		MPMX19_01172	0.33	-0.1
1,211,049	-		MPMX19_01172	0.33	-0.1
1,211,049	-		MPMX19_01172	0.33	-0.8
1,211,049	-		MPMX19_01172	0.33	-0.1
1,211,049	-		MPMX19_01172	0.33	+0.3
1,211,049	-		MPMX19_01172	0.33	-1.0
1,211,099	+		MPMX19_01172	0.37	+0.5
1,211,099	+		MPMX19_01172	0.37	+0.6
1,211,099	+		MPMX19_01172	0.37	-1.2
1,211,099	+		MPMX19_01172	0.37	-0.0
1,211,099	+		MPMX19_01172	0.37	+0.8
1,211,099	+		MPMX19_01172	0.37	+0.8
1,211,099	+		MPMX19_01172	0.37	-0.5
1,211,099	+		MPMX19_01172	0.37	+0.9
1,211,099	+		MPMX19_01172	0.37	-0.7
1,211,099	+		MPMX19_01172	0.37	-0.2
1,211,099	+		MPMX19_01172	0.37	-1.0
1,211,099	+		MPMX19_01172	0.37	+1.5
1,211,099	+		MPMX19_01172	0.37	-0.1
1,211,099	+		MPMX19_01172	0.37	-1.5
1,211,099	+		MPMX19_01172	0.37	+0.9
1,211,099	+		MPMX19_01172	0.37	-1.1
1,211,099	+		MPMX19_01172	0.37	-0.8
1,211,099	+		MPMX19_01172	0.37	-0.7
1,211,099	+		MPMX19_01172	0.37	-1.0
1,211,099	+		MPMX19_01172	0.37	+0.1
1,211,100	-		MPMX19_01172	0.37	-0.8
1,211,100	-		MPMX19_01172	0.37	-0.8
1,211,100	-		MPMX19_01172	0.37	-1.4
1,211,100	-		MPMX19_01172	0.37	-2.2
1,211,100	-		MPMX19_01172	0.37	+0.0
1,211,100	-		MPMX19_01172	0.37	-0.3
1,211,100	-		MPMX19_01172	0.37	-0.7
1,211,100	-		MPMX19_01172	0.37	-0.5
1,211,100	-		MPMX19_01172	0.37	-0.1
1,211,100	-		MPMX19_01172	0.37	-0.8
1,211,100	-		MPMX19_01172	0.37	-0.4
1,211,100	-		MPMX19_01172	0.37	+0.8
1,211,100	-		MPMX19_01172	0.37	-2.3
1,211,100	-		MPMX19_01172	0.37	-1.1
1,211,100	-		MPMX19_01172	0.37	-0.5
1,211,100	-		MPMX19_01172	0.37	-2.0
1,211,100	-		MPMX19_01172	0.37	+0.7
1,211,100	-		MPMX19_01172	0.37	-0.8
1,211,100	-		MPMX19_01172	0.37	+0.5
1,211,100	-		MPMX19_01172	0.37	+0.5
1,211,100	-		MPMX19_01172	0.37	-1.1
1,211,100	-		MPMX19_01172	0.37	-1.3
1,211,100	-		MPMX19_01172	0.37	+0.3
1,211,100	-		MPMX19_01172	0.37	-1.3
1,211,100	-		MPMX19_01172	0.37	-0.6
1,211,100	-		MPMX19_01172	0.37	+0.5
1,211,100	-		MPMX19_01172	0.37	-0.9
1,211,100	-		MPMX19_01172	0.37	+0.6
1,211,100	-		MPMX19_01172	0.37	-0.8
1,211,100	-		MPMX19_01172	0.37	+0.1
1,211,102	-		MPMX19_01172	0.37	-0.5
1,211,102	-		MPMX19_01172	0.37	-0.7
1,211,102	-		MPMX19_01172	0.37	+0.1
1,211,102	-		MPMX19_01172	0.37	-0.8