Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01064

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,102,583	+		MPMX19_01063	0.17	-1.4
1,102,583	+		MPMX19_01063	0.17	-0.1
1,102,584	-		MPMX19_01063	0.17	+0.3
1,102,584	-		MPMX19_01063	0.17	-0.1
1,102,584	-		MPMX19_01063	0.17	-2.0
1,102,584	-		MPMX19_01063	0.17	+0.4
1,102,584	-		MPMX19_01063	0.17	+0.1
1,102,761	+		MPMX19_01063	0.37	-1.8
1,102,761	+		MPMX19_01063	0.37	-1.0
1,102,762	-		MPMX19_01063	0.37	-1.1
1,102,762	-		MPMX19_01063	0.37	-1.1
1,102,762	-		MPMX19_01063	0.37	+0.2
1,102,781	+		MPMX19_01063	0.39	+0.5
1,102,781	+		MPMX19_01063	0.39	-0.1
1,102,781	+		MPMX19_01063	0.39	-1.1
1,102,781	+		MPMX19_01063	0.39	-0.3
1,102,781	+		MPMX19_01063	0.39	-0.5
1,102,781	+		MPMX19_01063	0.39	-0.3
1,102,781	+		MPMX19_01063	0.39	-1.5
1,102,781	+		MPMX19_01063	0.39	+0.1
1,102,781	+		MPMX19_01063	0.39	-1.2
1,102,782	-		MPMX19_01063	0.39	+0.2
1,102,782	-		MPMX19_01063	0.39	+0.7
1,102,782	-		MPMX19_01063	0.39	+0.5
1,102,782	-		MPMX19_01063	0.39	+0.7
1,102,782	-		MPMX19_01063	0.39	-2.0
1,102,782	-		MPMX19_01063	0.39	+0.3
1,102,782	-		MPMX19_01063	0.39	-0.7
1,102,782	-		MPMX19_01063	0.39	+0.3
1,102,947	+		MPMX19_01063	0.57	-1.1
1,102,948	-		MPMX19_01063	0.58	+0.3
1,102,948	-		MPMX19_01063	0.58	-0.6
1,102,948	-		MPMX19_01063	0.58	-0.1
1,102,948	-		MPMX19_01063	0.58	-1.6
1,102,958	+		MPMX19_01063	0.59	-0.3
1,102,958	+		MPMX19_01063	0.59	+0.3
1,102,958	+		MPMX19_01063	0.59	+0.1
1,102,958	+		MPMX19_01063	0.59	-0.5
1,102,959	-		MPMX19_01063	0.59	-0.1
1,102,959	-		MPMX19_01063	0.59	-1.1
1,103,258	+				-1.6
1,103,258	+				+0.9
1,103,258	+				-0.5
1,103,258	+				-0.2
1,103,258	+				-0.0
1,103,258	+				-0.7
1,103,258	+				-0.8
1,103,258	+				+1.0
1,103,258	+				-0.5
1,103,258	+				+0.1
1,103,259	-				-0.3
1,103,259	-				+0.5
1,103,259	-				-0.3
1,103,259	-				+0.1
1,103,259	-				+0.1
1,103,259	-				-0.1
1,103,259	-				+0.9
1,103,259	-				+0.3
1,103,259	-				-1.7
1,103,259	-				-1.3
1,103,282	+				+0.9
1,103,282	+				+0.2
1,103,282	+				-1.1
1,103,282	+				+0.0
1,103,282	+				-1.2
1,103,283	-				-0.5
1,103,283	-				-1.3
1,103,283	-				+1.0
1,103,384	+				-0.6
1,103,384	+				+0.3
1,103,384	+				+1.5
1,103,384	+				+0.3
1,103,384	+				+0.7
1,103,384	+				+0.5
1,103,385	-				-1.6
1,103,385	-				-1.8
1,103,385	-				+0.3
1,103,385	-				-1.7
1,103,385	-				+1.0
1,103,385	-				-1.3
1,103,385	-				-2.3
1,103,385	-				-1.7
1,103,570	+		MPMX19_01064	0.19	+0.5
1,103,570	+		MPMX19_01064	0.19	-2.4
1,103,571	-		MPMX19_01064	0.19	-0.7
1,103,571	-		MPMX19_01064	0.19	+0.4
1,103,571	-		MPMX19_01064	0.19	+0.1
1,103,571	-		MPMX19_01064	0.19	-0.6
1,103,705	+		MPMX19_01064	0.33	-0.0
1,103,705	+		MPMX19_01064	0.33	-0.8
1,103,705	+		MPMX19_01064	0.33	-0.4
1,103,705	+		MPMX19_01064	0.33	-0.3
1,103,705	+		MPMX19_01064	0.33	-2.7
1,103,705	+		MPMX19_01064	0.33	-1.4
1,103,705	+		MPMX19_01064	0.33	-1.4
1,103,706	-		MPMX19_01064	0.33	-0.5
1,103,706	-		MPMX19_01064	0.33	-1.3
1,103,706	-		MPMX19_01064	0.33	+0.2
1,103,706	-		MPMX19_01064	0.33	-0.7
1,103,706	-		MPMX19_01064	0.33	-1.0
1,103,706	-		MPMX19_01064	0.33	-0.3
1,103,706	-		MPMX19_01064	0.33	+0.0
1,103,706	-		MPMX19_01064	0.33	-1.0
1,103,706	-		MPMX19_01064	0.33	-0.3
1,103,858	+		MPMX19_01064	0.48	-1.3
1,103,858	+		MPMX19_01064	0.48	-1.7
1,103,858	+		MPMX19_01064	0.48	+0.5
1,103,858	+		MPMX19_01064	0.48	-0.1
1,103,858	+		MPMX19_01064	0.48	-0.3
1,103,858	+		MPMX19_01064	0.48	+0.6
1,103,858	+		MPMX19_01064	0.48	+0.0
1,103,858	+		MPMX19_01064	0.48	+0.3
1,103,858	+		MPMX19_01064	0.48	-0.8
1,103,858	+		MPMX19_01064	0.48	-0.5
1,103,858	+		MPMX19_01064	0.48	+0.3
1,103,858	+		MPMX19_01064	0.48	-1.1
1,103,858	+		MPMX19_01064	0.48	-1.3
1,103,858	+		MPMX19_01064	0.48	-0.7
1,103,858	+		MPMX19_01064	0.48	-1.5
1,103,858	+		MPMX19_01064	0.48	-2.2
1,103,858	+		MPMX19_01064	0.48	-2.7
1,103,858	+		MPMX19_01064	0.48	-0.5
1,103,858	+		MPMX19_01064	0.48	-1.7
1,103,858	+		MPMX19_01064	0.48	-1.1
1,103,858	+		MPMX19_01064	0.48	+1.3
1,103,858	+		MPMX19_01064	0.48	-0.5
1,103,859	-		MPMX19_01064	0.49	-0.8
1,103,859	-		MPMX19_01064	0.49	+0.0
1,103,859	-		MPMX19_01064	0.49	-0.2
1,103,859	-		MPMX19_01064	0.49	-1.7
1,103,859	-		MPMX19_01064	0.49	-0.4
1,103,859	-		MPMX19_01064	0.49	-1.1
1,103,859	-		MPMX19_01064	0.49	-1.5
1,103,859	-		MPMX19_01064	0.49	-1.0
1,103,859	-		MPMX19_01064	0.49	+0.4
1,103,859	-		MPMX19_01064	0.49	-1.0
1,103,859	-		MPMX19_01064	0.49	-1.3
1,103,859	-		MPMX19_01064	0.49	+0.2
1,103,859	-		MPMX19_01064	0.49	-0.9
1,103,859	-		MPMX19_01064	0.49	+0.2
1,103,859	-		MPMX19_01064	0.49	+0.3
1,103,859	-		MPMX19_01064	0.49	-0.5
1,103,859	-		MPMX19_01064	0.49	-1.4
1,103,859	-		MPMX19_01064	0.49	-0.5
1,103,859	-		MPMX19_01064	0.49	+0.3
1,103,859	-		MPMX19_01064	0.49	+0.3
1,103,859	-		MPMX19_01064	0.49	-1.9
1,103,859	-		MPMX19_01064	0.49	-0.5
1,103,859	-		MPMX19_01064	0.49	+0.1
1,104,156	-		MPMX19_01064	0.79	-0.6
1,104,156	-		MPMX19_01064	0.79	+1.2
1,104,156	-		MPMX19_01064	0.79	-1.0
1,104,399	+				+0.3
1,104,399	+				-1.7
1,104,399	+				-1.5
1,104,453	-				-0.5
1,104,453	-				-1.7
1,104,509	+				-1.3
1,104,509	+				-1.8
1,104,509	+				-0.5
1,104,509	+				-0.9
1,104,509	+				-0.8
1,104,509	+				-0.8
1,104,509	+				-0.9
1,104,509	+				-0.4
1,104,509	+				+0.3
1,104,509	+				-1.1
1,104,509	+				-0.5
1,104,509	+				-1.3
1,104,509	+				-1.1
1,104,509	+				-0.8
1,104,509	+				+0.9
1,104,509	+				+1.1
1,104,509	+				-1.0
1,104,509	+				-0.9
1,104,509	+				-0.7
1,104,509	+				-1.2
1,104,509	+				-1.0
1,104,509	+				-0.8
1,104,509	+				+0.9
1,104,509	+				-1.0
1,104,509	+				-1.2
1,104,510	-				-0.5
1,104,510	-				-0.3
1,104,510	-				-1.8
1,104,510	-				-0.3
1,104,510	-				+0.2
1,104,510	-				-1.8
1,104,510	-				+0.5
1,104,510	-				+0.2
1,104,510	-				-0.1
1,104,510	-				+1.3
1,104,510	-				-0.7
1,104,510	-				+1.0
1,104,510	-				+0.8
1,104,510	-				-0.5
1,104,510	-				-0.5
1,104,510	-				+2.3
1,104,510	-				-0.5
1,104,510	-				+0.6
1,104,510	-				-0.7
1,104,510	-				-0.4
1,104,510	-				+0.7
1,104,510	-				-0.1
1,104,510	-				+0.5
1,104,510	-				-0.8
1,104,511	+				-0.2
1,104,511	+				-1.1
1,104,511	+				-0.6
1,104,511	+				-0.3
1,104,511	+				-1.8
1,104,511	+				-0.4
1,104,511	+				-1.3
1,104,511	+				-0.7
1,104,512	-				-0.9
1,104,512	-				+0.7
1,104,512	-				-0.7
1,104,512	-				-1.1
1,104,512	-				+0.2
1,104,512	-				-0.1
1,104,512	-				+0.4
1,104,512	-				-0.9
1,104,512	-				-1.5
1,104,512	-				-0.6
1,104,683	+		MPMX19_01065	0.38	+0.5
1,104,683	+		MPMX19_01065	0.38	-0.8
1,104,683	+		MPMX19_01065	0.38	+1.3
1,104,683	+		MPMX19_01065	0.38	-0.3
1,104,683	+		MPMX19_01065	0.38	-0.2
1,104,683	+		MPMX19_01065	0.38	-0.1
1,104,683	+		MPMX19_01065	0.38	-0.5
1,104,683	+		MPMX19_01065	0.38	+0.3
1,104,683	+		MPMX19_01065	0.38	-0.3
1,104,683	+		MPMX19_01065	0.38	-0.4
1,104,683	+		MPMX19_01065	0.38	+0.9
1,104,683	+		MPMX19_01065	0.38	+0.5
1,104,684	-		MPMX19_01065	0.38	+0.3
1,104,684	-		MPMX19_01065	0.38	-1.2
1,104,684	-		MPMX19_01065	0.38	-0.8
1,104,684	-		MPMX19_01065	0.38	-0.5
1,104,684	-		MPMX19_01065	0.38	-0.9
1,104,684	-		MPMX19_01065	0.38	-0.3
1,104,779	+		MPMX19_01065	0.63	-0.0
1,104,779	+		MPMX19_01065	0.63	-0.2
1,104,779	+		MPMX19_01065	0.63	-0.7
1,104,779	+		MPMX19_01065	0.63	+1.2
1,104,779	+		MPMX19_01065	0.63	+1.0
1,104,779	+		MPMX19_01065	0.63	-1.7
1,104,779	+		MPMX19_01065	0.63	+0.2
1,104,780	-		MPMX19_01065	0.63	-0.3
1,104,780	-		MPMX19_01065	0.63	-1.6
1,104,780	-		MPMX19_01065	0.63	+0.1
1,104,780	-		MPMX19_01065	0.63	-2.4
1,104,780	-		MPMX19_01065	0.63	-1.5
1,104,780	-		MPMX19_01065	0.63	-1.8
1,104,780	-		MPMX19_01065	0.63	-0.1
1,104,780	-		MPMX19_01065	0.63	-0.3
1,104,802	+		MPMX19_01065	0.69	-0.8
1,104,802	+		MPMX19_01065	0.69	-0.7
1,104,802	+		MPMX19_01065	0.69	-0.7
1,104,802	+		MPMX19_01065	0.69	+0.5
1,104,802	+		MPMX19_01065	0.69	-0.8
1,104,802	+		MPMX19_01065	0.69	-1.2
1,104,802	+		MPMX19_01065	0.69	-0.2
1,104,802	+		MPMX19_01065	0.69	+0.1
1,104,802	+		MPMX19_01065	0.69	-0.1
1,104,802	+		MPMX19_01065	0.69	+0.4
1,104,802	+		MPMX19_01065	0.69	-1.4
1,104,802	+		MPMX19_01065	0.69	-0.2
1,104,802	+		MPMX19_01065	0.69	-0.2
1,104,802	+		MPMX19_01065	0.69	-2.5
1,104,802	+		MPMX19_01065	0.69	+0.5
1,104,802	+		MPMX19_01065	0.69	-0.3
1,104,802	+		MPMX19_01065	0.69	+0.5
1,104,803	-		MPMX19_01065	0.69	-0.5
1,104,803	-		MPMX19_01065	0.69	-0.3
1,104,803	-		MPMX19_01065	0.69	-1.0
1,104,803	-		MPMX19_01065	0.69	+0.1
1,104,803	-		MPMX19_01065	0.69	-0.5
1,104,803	-		MPMX19_01065	0.69	+1.3
1,104,803	-		MPMX19_01065	0.69	-1.0
1,104,803	-		MPMX19_01065	0.69	-0.8
1,104,803	-		MPMX19_01065	0.69	+0.5
1,104,803	-		MPMX19_01065	0.69	+0.3
1,104,803	-		MPMX19_01065	0.69	+0.5
1,104,803	-		MPMX19_01065	0.69	-0.6
1,104,803	-		MPMX19_01065	0.69	-0.1
1,104,803	-		MPMX19_01065	0.69	+0.2
1,104,803	-		MPMX19_01065	0.69	-0.3
1,104,803	-		MPMX19_01065	0.69	+0.2
1,104,803	-		MPMX19_01065	0.69	+0.1
1,104,917	+				-1.8
1,104,960	+				-1.5
1,104,983	+				+1.3
1,104,983	+				+1.5
1,104,983	+				-1.5
1,104,983	+				-0.7
1,104,983	+				+0.9
1,104,983	+				+0.9
1,104,983	+				-0.5
1,104,983	+				+0.2
1,104,983	+				-2.1
1,104,983	+				+0.1
1,104,983	+				-2.0
1,104,983	+				-0.2
1,104,983	+				+0.3
1,104,983	+				+0.8
1,104,983	+				+0.9
1,104,984	-				+0.1
1,104,984	-				-1.1
1,104,984	-				-2.4
1,104,984	-				+0.1
1,104,984	-				-0.4
1,104,984	-				-0.7
1,104,984	-				+0.2
1,104,984	-				+0.0
1,104,984	-				+0.2
1,104,984	-				-1.1
1,104,984	-				+0.0
1,104,984	-				+0.6
1,104,984	-				-2.1
1,104,984	-				+0.3
1,104,984	-				+1.2
1,105,092	-		MPMX19_01066	0.51	-0.1
1,105,161	+				-1.0
1,105,161	+				+0.5
1,105,161	+				+0.0
1,105,161	+				-1.2
1,105,161	+				-0.5
1,105,162	-				+0.0
1,105,162	-				-0.4
1,105,162	-				-1.6
1,105,162	-				+0.3
1,105,162	-				+0.5
1,105,162	-				-1.1
1,105,162	-				+1.0
1,105,162	-				-0.3
1,105,162	-				-0.5
1,105,162	-				+0.7
1,105,247	+				-0.3
1,105,247	+				-1.8
1,105,247	+				-1.3
1,105,248	-				-0.9
1,105,248	-				-0.0
1,105,248	-				-2.1
1,105,248	-				-0.3
1,105,248	-				-0.6
1,105,248	-				-1.6
1,105,338	+				-0.8
1,105,338	+				-1.1