Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF933 and GFF934 are separated by 134 nucleotides GFF934 and GFF935 are separated by 236 nucleotides GFF935 and GFF936 are separated by 54 nucleotides
GFF933 - hypothetical protein, at 263,413 to 266,337
GFF933
GFF934 - HTH-type transcriptional activator RhaR, at 266,472 to 266,903
GFF934
GFF935 - hypothetical protein, at 267,140 to 268,123
GFF935
GFF936 - Nodulation protein D 2, at 268,178 to 269,101
GFF936
Position (kb) 267
268
269 Strain fitness (log2 ratio) -1
0
1 at 266.269 kb on + strand at 266.269 kb on + strand at 266.269 kb on + strand at 266.269 kb on + strand at 266.424 kb on - strand at 266.424 kb on - strand at 266.892 kb on + strand at 266.892 kb on + strand at 266.892 kb on + strand at 266.896 kb on + strand at 266.896 kb on + strand at 266.896 kb on + strand at 266.897 kb on - strand at 266.897 kb on - strand at 266.897 kb on - strand at 266.897 kb on - strand at 267.003 kb on - strand at 267.016 kb on - strand at 267.025 kb on + strand at 267.025 kb on + strand at 267.026 kb on - strand at 267.240 kb on - strand, within GFF935 at 267.638 kb on + strand, within GFF935 at 267.639 kb on - strand, within GFF935 at 267.723 kb on - strand, within GFF935 at 267.970 kb on - strand, within GFF935 at 268.088 kb on + strand at 268.088 kb on + strand at 268.088 kb on + strand at 268.088 kb on + strand at 268.122 kb on - strand at 268.186 kb on + strand at 268.533 kb on + strand, within GFF936 at 268.589 kb on + strand, within GFF936 at 268.590 kb on - strand, within GFF936 at 268.590 kb on - strand, within GFF936 at 268.590 kb on - strand, within GFF936 at 268.643 kb on + strand, within GFF936 at 268.643 kb on + strand, within GFF936 at 268.643 kb on + strand, within GFF936 at 268.690 kb on + strand, within GFF936 at 268.749 kb on - strand, within GFF936 at 269.099 kb on + strand at 269.100 kb on - strand at 269.100 kb on - strand at 269.100 kb on - strand at 269.100 kb on - strand at 269.100 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 266,269 + -0.2 266,269 + +0.6 266,269 + -0.5 266,269 + +0.1 266,424 - -1.1 266,424 - -0.4 266,892 + +0.1 266,892 + -0.8 266,892 + +0.6 266,896 + +0.9 266,896 + +1.1 266,896 + -0.7 266,897 - -1.2 266,897 - +0.9 266,897 - +0.6 266,897 - -0.5 267,003 - +0.6 267,016 - +0.9 267,025 + -0.7 267,025 + +0.5 267,026 - +0.6 267,240 - GFF935 0.10 -0.8 267,638 + GFF935 0.51 -0.7 267,639 - GFF935 0.51 -0.3 267,723 - GFF935 0.59 -0.6 267,970 - GFF935 0.84 -1.0 268,088 + +1.1 268,088 + -0.6 268,088 + -0.9 268,088 + -0.3 268,122 - +1.0 268,186 + -1.3 268,533 + GFF936 0.38 +0.9 268,589 + GFF936 0.44 -0.1 268,590 - GFF936 0.45 -0.5 268,590 - GFF936 0.45 -0.2 268,590 - GFF936 0.45 -1.3 268,643 + GFF936 0.50 -0.4 268,643 + GFF936 0.50 -0.7 268,643 + GFF936 0.50 +0.1 268,690 + GFF936 0.55 -0.5 268,749 - GFF936 0.62 -0.1 269,099 + -1.7 269,100 - -0.7 269,100 - -0.8 269,100 - -0.4 269,100 - -0.1 269,100 - +0.1
Or see this region's nucleotide sequence