Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF743 and GFF744 are separated by 136 nucleotides GFF744 and GFF745 are separated by 35 nucleotides
GFF743 - hypothetical protein, at 61,122 to 62,255
GFF743
GFF744 - Linear gramicidin dehydrogenase LgrE, at 62,392 to 63,132
GFF744
GFF745 - hypothetical protein, at 63,168 to 64,151
GFF745
Position (kb) 62
63
64 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 61.501 kb on + strand, within GFF743 at 61.501 kb on + strand, within GFF743 at 61.502 kb on - strand, within GFF743 at 61.559 kb on - strand, within GFF743 at 61.673 kb on - strand, within GFF743 at 61.673 kb on - strand, within GFF743 at 61.798 kb on + strand, within GFF743 at 62.334 kb on + strand at 62.335 kb on - strand at 62.602 kb on + strand, within GFF744 at 62.602 kb on + strand, within GFF744 at 62.735 kb on - strand, within GFF744 at 63.146 kb on + strand at 63.146 kb on + strand at 63.147 kb on - strand at 63.405 kb on + strand, within GFF745 at 63.405 kb on + strand, within GFF745 at 63.450 kb on + strand, within GFF745 at 63.450 kb on + strand, within GFF745 at 63.451 kb on - strand, within GFF745 at 63.451 kb on - strand, within GFF745 at 63.451 kb on - strand, within GFF745 at 63.451 kb on - strand, within GFF745 at 63.507 kb on + strand, within GFF745 at 63.540 kb on + strand, within GFF745 at 63.541 kb on - strand, within GFF745 at 63.654 kb on + strand, within GFF745 at 63.654 kb on + strand, within GFF745 at 63.654 kb on + strand, within GFF745 at 63.654 kb on + strand, within GFF745 at 63.654 kb on + strand, within GFF745 at 63.654 kb on + strand, within GFF745 at 63.655 kb on - strand, within GFF745 at 63.655 kb on - strand, within GFF745 at 63.736 kb on - strand, within GFF745 at 63.784 kb on + strand, within GFF745 at 63.785 kb on - strand, within GFF745 at 63.938 kb on + strand, within GFF745 at 63.938 kb on + strand, within GFF745 at 63.938 kb on + strand, within GFF745 at 63.939 kb on - strand, within GFF745 at 63.939 kb on - strand, within GFF745 at 63.939 kb on - strand, within GFF745 at 63.939 kb on - strand, within GFF745 at 63.939 kb on - strand, within GFF745 at 63.939 kb on - strand, within GFF745 at 63.945 kb on + strand, within GFF745 at 63.945 kb on + strand, within GFF745 at 63.945 kb on + strand, within GFF745 at 63.946 kb on - strand, within GFF745 at 63.946 kb on - strand, within GFF745 at 63.946 kb on - strand, within GFF745 at 63.949 kb on - strand, within GFF745 at 63.949 kb on - strand, within GFF745 at 64.109 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 61,501 + GFF743 0.33 +0.9 61,501 + GFF743 0.33 -1.1 61,502 - GFF743 0.34 -0.5 61,559 - GFF743 0.39 +0.1 61,673 - GFF743 0.49 +0.5 61,673 - GFF743 0.49 +0.3 61,798 + GFF743 0.60 +0.5 62,334 + +0.3 62,335 - -0.2 62,602 + GFF744 0.28 -0.3 62,602 + GFF744 0.28 -2.1 62,735 - GFF744 0.46 -1.5 63,146 + -0.6 63,146 + +0.3 63,147 - -2.8 63,405 + GFF745 0.24 +0.4 63,405 + GFF745 0.24 -0.1 63,450 + GFF745 0.29 -0.9 63,450 + GFF745 0.29 -0.1 63,451 - GFF745 0.29 +1.8 63,451 - GFF745 0.29 -0.6 63,451 - GFF745 0.29 +1.8 63,451 - GFF745 0.29 -0.3 63,507 + GFF745 0.34 -0.2 63,540 + GFF745 0.38 +0.3 63,541 - GFF745 0.38 -0.2 63,654 + GFF745 0.49 -0.9 63,654 + GFF745 0.49 -0.5 63,654 + GFF745 0.49 -0.5 63,654 + GFF745 0.49 -0.5 63,654 + GFF745 0.49 +0.7 63,654 + GFF745 0.49 -0.1 63,655 - GFF745 0.49 +0.1 63,655 - GFF745 0.49 +0.5 63,736 - GFF745 0.58 +0.1 63,784 + GFF745 0.63 +0.1 63,785 - GFF745 0.63 -0.7 63,938 + GFF745 0.78 -2.1 63,938 + GFF745 0.78 -1.3 63,938 + GFF745 0.78 -0.2 63,939 - GFF745 0.78 -0.9 63,939 - GFF745 0.78 -0.6 63,939 - GFF745 0.78 -1.2 63,939 - GFF745 0.78 -0.3 63,939 - GFF745 0.78 -0.7 63,939 - GFF745 0.78 -0.2 63,945 + GFF745 0.79 -0.0 63,945 + GFF745 0.79 -0.9 63,945 + GFF745 0.79 +0.8 63,946 - GFF745 0.79 -0.5 63,946 - GFF745 0.79 -1.1 63,946 - GFF745 0.79 +0.2 63,949 - GFF745 0.79 -1.0 63,949 - GFF745 0.79 -0.5 64,109 + -0.2
Or see this region's nucleotide sequence