Experiment: D,L-Lactate and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF512 and GFF513 are separated by 239 nucleotides GFF513 and GFF514 are separated by 136 nucleotides GFF514 and GFF515 are separated by 21 nucleotides
GFF512 - DNA helicase II, at 568,857 to 571,040
GFF512
GFF513 - hypothetical protein, at 571,280 to 572,155
GFF513
GFF514 - hypothetical protein, at 572,292 to 572,699
GFF514
GFF515 - Glutathione-regulated potassium-efflux system protein KefB, at 572,721 to 574,484
GFF515
Position (kb) 571
572
573 Strain fitness (log2 ratio) -2
-1
0
1 at 570.567 kb on + strand, within GFF512 at 570.660 kb on + strand, within GFF512 at 570.660 kb on + strand, within GFF512 at 570.661 kb on - strand, within GFF512 at 570.669 kb on - strand, within GFF512 at 570.724 kb on - strand, within GFF512 at 570.724 kb on - strand, within GFF512 at 570.738 kb on + strand, within GFF512 at 570.738 kb on + strand, within GFF512 at 570.739 kb on - strand, within GFF512 at 570.739 kb on - strand, within GFF512 at 570.739 kb on - strand, within GFF512 at 570.741 kb on - strand, within GFF512 at 570.741 kb on - strand, within GFF512 at 570.908 kb on - strand at 570.908 kb on - strand at 570.908 kb on - strand at 571.017 kb on + strand at 571.038 kb on + strand at 571.039 kb on - strand at 571.091 kb on - strand at 571.091 kb on - strand at 571.124 kb on - strand at 571.136 kb on + strand at 571.148 kb on + strand at 571.148 kb on + strand at 571.148 kb on + strand at 571.149 kb on - strand at 571.223 kb on + strand at 571.224 kb on - strand at 571.272 kb on + strand at 571.273 kb on - strand at 571.295 kb on - strand at 571.958 kb on + strand, within GFF513 at 571.959 kb on - strand, within GFF513 at 571.959 kb on - strand, within GFF513 at 572.227 kb on + strand at 572.227 kb on + strand at 572.237 kb on + strand at 572.237 kb on + strand at 572.237 kb on + strand at 572.237 kb on + strand at 572.237 kb on + strand at 572.237 kb on + strand at 572.237 kb on + strand at 572.238 kb on - strand at 572.238 kb on - strand at 572.238 kb on - strand at 572.238 kb on - strand at 572.242 kb on + strand at 572.242 kb on + strand at 572.242 kb on + strand at 572.242 kb on + strand at 572.242 kb on + strand at 572.242 kb on + strand at 572.243 kb on - strand at 572.243 kb on - strand at 572.243 kb on - strand at 572.245 kb on - strand at 572.257 kb on - strand at 572.451 kb on + strand, within GFF514 at 572.451 kb on + strand, within GFF514 at 572.499 kb on + strand, within GFF514 at 572.499 kb on + strand, within GFF514 at 572.499 kb on + strand, within GFF514 at 572.499 kb on + strand, within GFF514 at 572.499 kb on + strand, within GFF514 at 572.499 kb on + strand, within GFF514 at 572.500 kb on - strand, within GFF514 at 572.500 kb on - strand, within GFF514 at 572.580 kb on + strand, within GFF514 at 572.580 kb on + strand, within GFF514 at 572.581 kb on - strand, within GFF514 at 572.581 kb on - strand, within GFF514 at 572.581 kb on - strand, within GFF514 at 572.583 kb on + strand, within GFF514 at 572.583 kb on + strand, within GFF514 at 572.583 kb on + strand, within GFF514 at 572.584 kb on - strand, within GFF514 at 572.584 kb on - strand, within GFF514 at 572.783 kb on + strand at 572.783 kb on + strand at 572.784 kb on - strand at 573.151 kb on + strand, within GFF515 at 573.151 kb on + strand, within GFF515 at 573.151 kb on + strand, within GFF515 at 573.152 kb on - strand, within GFF515 at 573.152 kb on - strand, within GFF515
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate and casaminos (C) remove 570,567 + GFF512 0.78 -0.9 570,660 + GFF512 0.83 +0.6 570,660 + GFF512 0.83 +0.8 570,661 - GFF512 0.83 +1.0 570,669 - GFF512 0.83 -0.8 570,724 - GFF512 0.85 -0.2 570,724 - GFF512 0.85 +0.3 570,738 + GFF512 0.86 +0.8 570,738 + GFF512 0.86 +0.3 570,739 - GFF512 0.86 +1.2 570,739 - GFF512 0.86 -0.9 570,739 - GFF512 0.86 -0.8 570,741 - GFF512 0.86 +0.1 570,741 - GFF512 0.86 -1.5 570,908 - +0.7 570,908 - -2.0 570,908 - -0.3 571,017 + +0.4 571,038 + +0.5 571,039 - +0.1 571,091 - +0.4 571,091 - +0.3 571,124 - -0.4 571,136 + +0.4 571,148 + -0.8 571,148 + +0.3 571,148 + +0.2 571,149 - -1.1 571,223 + -0.1 571,224 - -0.3 571,272 + +0.1 571,273 - +0.6 571,295 - +0.1 571,958 + GFF513 0.77 -0.3 571,959 - GFF513 0.78 -1.6 571,959 - GFF513 0.78 +0.5 572,227 + +0.8 572,227 + -0.2 572,237 + +0.6 572,237 + +0.1 572,237 + +0.0 572,237 + +0.3 572,237 + -0.2 572,237 + +0.2 572,237 + -1.8 572,238 - -1.3 572,238 - +0.5 572,238 - +0.0 572,238 - +0.5 572,242 + -0.7 572,242 + +0.4 572,242 + -0.0 572,242 + -0.2 572,242 + +0.0 572,242 + -0.0 572,243 - -0.1 572,243 - -1.2 572,243 - -0.0 572,245 - +0.2 572,257 - -1.4 572,451 + GFF514 0.39 +0.1 572,451 + GFF514 0.39 +0.5 572,499 + GFF514 0.51 +0.3 572,499 + GFF514 0.51 -0.7 572,499 + GFF514 0.51 -0.2 572,499 + GFF514 0.51 +0.3 572,499 + GFF514 0.51 -0.4 572,499 + GFF514 0.51 +0.4 572,500 - GFF514 0.51 -0.1 572,500 - GFF514 0.51 +0.1 572,580 + GFF514 0.71 -0.8 572,580 + GFF514 0.71 -0.5 572,581 - GFF514 0.71 -0.3 572,581 - GFF514 0.71 -0.2 572,581 - GFF514 0.71 -0.6 572,583 + GFF514 0.71 -0.5 572,583 + GFF514 0.71 +0.0 572,583 + GFF514 0.71 -1.3 572,584 - GFF514 0.72 -0.1 572,584 - GFF514 0.72 +0.7 572,783 + -0.9 572,783 + +0.7 572,784 - +0.6 573,151 + GFF515 0.24 -0.9 573,151 + GFF515 0.24 -1.3 573,151 + GFF515 0.24 +0.3 573,152 - GFF515 0.24 -0.2 573,152 - GFF515 0.24 +0.0
Or see this region's nucleotide sequence